BLASTX nr result

ID: Cnidium21_contig00010936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010936
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   644   0.0  
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   643   0.0  
ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putativ...   636   e-180
ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   630   e-178
ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|2...   618   e-174

>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
            sativus]
          Length = 449

 Score =  644 bits (1662), Expect = 0.0
 Identities = 314/364 (86%), Positives = 348/364 (95%)
 Frame = -2

Query: 1094 EDDKEVSSFKELGVCEQLVEACDSLGWKTPSKIQALVLPHALEGKDLIGLAQTGSGKTGA 915
            +D++EV +F+ LG+CEQLVEACDSLGWK PSKIQA  +PHALEGKDLIGLAQTGSGKTGA
Sbjct: 3    QDNEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 62

Query: 914  FAIPILQSLLENPQAFYACVLSPTRELAIQIAEQFEALGSGIGVKCTVLVGGVDQVQQSI 735
            FA+PILQ+LLE PQAF+ACVLSPTRELAIQIAEQFEALGSGIG+KC VLVGGVD VQQ+I
Sbjct: 63   FALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAI 122

Query: 734  SLGKRPHIIVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKVLDDILSAIPR 555
            +L KRPH++V TPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEK +D+IL+ IPR
Sbjct: 123  NLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPR 182

Query: 554  ERKTYLYSATMTKKVQKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPAKFKDCYLIYI 375
            ER+TYL+SATMTKKV+KLQRACLRNPVKIEAA+KYSTVDTLKQQY F+PAK+K+CYL+YI
Sbjct: 183  ERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYI 242

Query: 374  LTEMSGCTSMVFTRTCEATRFLALVLRNLGFRAIPISGQMTQSKRLGSLNKFKAGECNIL 195
            LTEMSG TSMVFTRTC+ATR L+L+LRNLG RAIPISGQMTQ+KRLG+LNKFKAGECNIL
Sbjct: 243  LTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNIL 302

Query: 194  ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYLQ 15
            ICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEWY+Q
Sbjct: 303  ICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 362

Query: 14   IEKL 3
            IEKL
Sbjct: 363  IEKL 366


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
            vinifera]
          Length = 470

 Score =  643 bits (1658), Expect = 0.0
 Identities = 313/364 (85%), Positives = 346/364 (95%)
 Frame = -2

Query: 1094 EDDKEVSSFKELGVCEQLVEACDSLGWKTPSKIQALVLPHALEGKDLIGLAQTGSGKTGA 915
            ED+KEV SFK+LG+CEQLVEAC++LGWKTPSKIQA  +PHALEGKDLIGLAQTGSGKTGA
Sbjct: 37   EDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 96

Query: 914  FAIPILQSLLENPQAFYACVLSPTRELAIQIAEQFEALGSGIGVKCTVLVGGVDQVQQSI 735
            FA+PILQ+LL+ PQ  +ACVLSPTRELAIQIAEQFEALGSGIG+KC VLVGGVD  QQ+I
Sbjct: 97   FALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAI 156

Query: 734  SLGKRPHIIVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKVLDDILSAIPR 555
            +L KRPHI+V TPGRL+DHLSNTKGFSLRT+KYLVLDEADRLLN+DFEK +D+ILS IPR
Sbjct: 157  ALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVIPR 216

Query: 554  ERKTYLYSATMTKKVQKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPAKFKDCYLIYI 375
            ERKTYL+SATMTKKV+KLQRACLRNPVKIE ASKYSTVDTLKQQYRFVPAK+K+CYL+YI
Sbjct: 217  ERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSTVDTLKQQYRFVPAKYKECYLVYI 276

Query: 374  LTEMSGCTSMVFTRTCEATRFLALVLRNLGFRAIPISGQMTQSKRLGSLNKFKAGECNIL 195
            LTE+SG T+MVFTRTC+ATR LAL+LRNLG RAIPISG M+Q+KRLG+LNKFKAGECNIL
Sbjct: 277  LTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKFKAGECNIL 336

Query: 194  ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYLQ 15
            ICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEWY+Q
Sbjct: 337  ICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 396

Query: 14   IEKL 3
            IEKL
Sbjct: 397  IEKL 400


>ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 442

 Score =  636 bits (1640), Expect = e-180
 Identities = 318/368 (86%), Positives = 345/368 (93%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1094 EDDKEVSSFKELGVCEQLVEACDSLGWKTPSKIQALVLPHALEGKDLIGLAQTGSGKTGA 915
            E+ +EV +FKELGVC+QLV ACD+LGWK P+KIQ   +PHALEGKDLIGLAQTGSGKTGA
Sbjct: 3    EEKEEVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHALEGKDLIGLAQTGSGKTGA 62

Query: 914  FAIPILQSLLE----NPQAFYACVLSPTRELAIQIAEQFEALGSGIGVKCTVLVGGVDQV 747
            FA+PILQSLLE    + QAF+ACVLSPTRELAIQIAEQFEALGS IGVKC VLVGGVD V
Sbjct: 63   FALPILQSLLEASEKSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGGVDMV 122

Query: 746  QQSISLGKRPHIIVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKVLDDILS 567
            QQSI+LGKRPHI+VATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEK LD+IL 
Sbjct: 123  QQSIALGKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSLDEILK 182

Query: 566  AIPRERKTYLYSATMTKKVQKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPAKFKDCY 387
             IPRER+T+L+SATMTKKV+KLQRACLRNPVKIEAASKYSTVDTLKQ+YRF+PAK+KDCY
Sbjct: 183  VIPRERRTFLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQEYRFIPAKYKDCY 242

Query: 386  LIYILTEMSGCTSMVFTRTCEATRFLALVLRNLGFRAIPISGQMTQSKRLGSLNKFKAGE 207
            L+YILTE SG TSMVFTRTC+AT FLALVLRNLG RAIPI+G MTQSKRLG+LNKFKAGE
Sbjct: 243  LVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRLGALNKFKAGE 302

Query: 206  CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELE 27
            CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYE+E
Sbjct: 303  CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEVE 362

Query: 26   WYLQIEKL 3
            W++QIEKL
Sbjct: 363  WFIQIEKL 370


>ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            10-like [Vitis vinifera]
          Length = 436

 Score =  630 bits (1626), Expect = e-178
 Identities = 308/364 (84%), Positives = 342/364 (93%)
 Frame = -2

Query: 1094 EDDKEVSSFKELGVCEQLVEACDSLGWKTPSKIQALVLPHALEGKDLIGLAQTGSGKTGA 915
            ED+KEV SFK+LG+CEQLVEAC++LGWKTPSKIQA  +PHALEGKDLIGLAQTGSGKTGA
Sbjct: 3    EDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 62

Query: 914  FAIPILQSLLENPQAFYACVLSPTRELAIQIAEQFEALGSGIGVKCTVLVGGVDQVQQSI 735
            FA+PILQ+LL+ PQ  +ACVLSPTRELAIQIAEQFEALGSGIG+KC VLVGGVD  QQ+I
Sbjct: 63   FALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAI 122

Query: 734  SLGKRPHIIVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKVLDDILSAIPR 555
            +L KRPHI+V T G L+DHLSNTKGFSLRT+KYLVLDEADRLLN+DFEK +D+ILS IP+
Sbjct: 123  ALAKRPHIVVGTLGXLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVIPQ 182

Query: 554  ERKTYLYSATMTKKVQKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPAKFKDCYLIYI 375
            ERKTYL+SATMTKKV+KLQRACLRNPVKIEA SKYSTVDTLKQQYRFVPAK+K+CYL+YI
Sbjct: 183  ERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSKYSTVDTLKQQYRFVPAKYKECYLVYI 242

Query: 374  LTEMSGCTSMVFTRTCEATRFLALVLRNLGFRAIPISGQMTQSKRLGSLNKFKAGECNIL 195
            LTE+SG T+MVFTRTC+ATR LAL+LRNLG  AIPISG M+Q+KRLG+LNKFKAGECNIL
Sbjct: 243  LTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNIL 302

Query: 194  ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYLQ 15
            ICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTA AGRSGVAISLVNQYELEWY+Q
Sbjct: 303  ICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQ 362

Query: 14   IEKL 3
            IEKL
Sbjct: 363  IEKL 366


>ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|222853576|gb|EEE91123.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  618 bits (1593), Expect = e-174
 Identities = 307/367 (83%), Positives = 340/367 (92%), Gaps = 4/367 (1%)
 Frame = -2

Query: 1091 DDKEVSSFKELGVCEQLVEACDSLGWKTPSKIQALVLPHALEGKDLIGLAQTGSGKTGAF 912
            + +EV SFK+LG+C+QLVEACDSLGWK P+KIQ   +PHALEGKDLIGLAQTGSGKTGAF
Sbjct: 21   EKEEVKSFKDLGICDQLVEACDSLGWKNPTKIQVEAVPHALEGKDLIGLAQTGSGKTGAF 80

Query: 911  AIPILQSLLENPQA----FYACVLSPTRELAIQIAEQFEALGSGIGVKCTVLVGGVDQVQ 744
            A+PILQ+LLE+ Q     F+ACVLSPTRELAIQIAEQFEALGSGIG++C VLVGGVD VQ
Sbjct: 81   ALPILQALLESSQKSVQPFFACVLSPTRELAIQIAEQFEALGSGIGLRCGVLVGGVDIVQ 140

Query: 743  QSISLGKRPHIIVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKVLDDILSA 564
            Q++ L KRPHI+VATPGRL+DHLSNTKGFSLRTLKYLVLDEADRLLNE+FEK LD+IL+ 
Sbjct: 141  QTLILAKRPHIVVATPGRLLDHLSNTKGFSLRTLKYLVLDEADRLLNEEFEKSLDEILNV 200

Query: 563  IPRERKTYLYSATMTKKVQKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPAKFKDCYL 384
            IPR+RKTYL+SATMTKKV+KLQRACLRNPVKIEAASKYSTVDTLKQQYRFVP+K KDCYL
Sbjct: 201  IPRDRKTYLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPSKHKDCYL 260

Query: 383  IYILTEMSGCTSMVFTRTCEATRFLALVLRNLGFRAIPISGQMTQSKRLGSLNKFKAGEC 204
            +YILTEMS  T+MVFTRTC+AT FLALVLRNLG RAIPI+G M+Q KRLG+LNKFKA EC
Sbjct: 261  VYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPINGHMSQPKRLGALNKFKAREC 320

Query: 203  NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 24
            N+LICTDVASRGLDIPSVDMVINYD+P+NSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 321  NVLICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 380

Query: 23   YLQIEKL 3
            YLQIE L
Sbjct: 381  YLQIENL 387


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