BLASTX nr result

ID: Cnidium21_contig00010923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010923
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...   169   7e-40
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...   157   2e-36
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...   155   1e-35
ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arab...   155   1e-35

>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  169 bits (428), Expect = 7e-40
 Identities = 86/107 (80%), Positives = 95/107 (88%)
 Frame = +1

Query: 142 LISRRGIASKLFVGGLSFYTTDNGLSEAFSQYGQIVEAKVVIDRVSDRSKGFGFVTFASE 321
           LI  RGIASKLFVGGLSFYTT+ GLSE FSQYGQ+VEAK+V+DRVSDRSKGFGFVTFASE
Sbjct: 26  LICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASE 85

Query: 322 DEADKAVTEMNGKQLNGRVIFVDHAKPKARFDDGGMPIARGPPETAA 462
           +EA KA TEM+GK+LNGR IFVD+AKP+A F  GGMPIARGPPE  A
Sbjct: 86  EEAQKARTEMDGKELNGRTIFVDYAKPRADF-GGGMPIARGPPEPTA 131


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  162 bits (410), Expect = 9e-38
 Identities = 81/112 (72%), Positives = 93/112 (83%)
 Frame = +1

Query: 133 TPFLISRRGIASKLFVGGLSFYTTDNGLSEAFSQYGQIVEAKVVIDRVSDRSKGFGFVTF 312
           T   I +RGI +KLFVGGLS YTT+NGLSEAFSQYGQ+VEAK+V+DR  DRSKGFGFVT+
Sbjct: 28  TALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTY 87

Query: 313 ASEDEADKAVTEMNGKQLNGRVIFVDHAKPKARFDDGGMPIARGPPETAASQ 468
           ASEDEA KA+ EMNGK LNGRVI+VD+AK K  F  GG+PIARGPPE   S+
Sbjct: 88  ASEDEAQKALDEMNGKALNGRVIYVDYAKLKTNF-GGGIPIARGPPEPTTSE 138


>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score =  157 bits (398), Expect = 2e-36
 Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = +1

Query: 115 NPNPTNTPFLIS-RRGIASKLFVGGLSFYTTDNGLSEAFSQYGQIVEAKVVIDRVSDRSK 291
           N N   +P L+S RRGIA KLFVGGLSFYTT+N LSEAFS YGQ++EAK+V DRVSDRSK
Sbjct: 11  NRNKILSPSLLSFRRGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSK 70

Query: 292 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPKARFDDGGMPIARGPPETAAS 465
           GFGFVTFAS+DEA+ A+ +M GK LNGRVIFVD+AKP      G +PIARGPPE  ++
Sbjct: 71  GFGFVTFASQDEAENAIEDMKGKTLNGRVIFVDYAKPNIN-TRGEIPIARGPPEPTST 127


>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/104 (75%), Positives = 90/104 (86%)
 Frame = +1

Query: 142 LISRRGIASKLFVGGLSFYTTDNGLSEAFSQYGQIVEAKVVIDRVSDRSKGFGFVTFASE 321
           L+S RGIA+KLFVGGLS+YTTD GLSEAFSQYGQ++EA VV+DRVSD+SKGFGFVTFAS 
Sbjct: 27  LVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASL 86

Query: 322 DEADKAVTEMNGKQLNGRVIFVDHAKPKARFDDGGMPIARGPPE 453
           DEA  A++EMNGK LNGRVIFV++AKP      G +PIARGPPE
Sbjct: 87  DEAHTALSEMNGKPLNGRVIFVNYAKPTTS-SRGAIPIARGPPE 129


>ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
           lyrata] gi|297317041|gb|EFH47463.1| hypothetical protein
           ARALYDRAFT_487428 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score =  155 bits (391), Expect = 1e-35
 Identities = 77/111 (69%), Positives = 90/111 (81%)
 Frame = +1

Query: 121 NPTNTPFLISRRGIASKLFVGGLSFYTTDNGLSEAFSQYGQIVEAKVVIDRVSDRSKGFG 300
           N + + F   RRG+ASKLFVGGLSF TT+ GLSEAFS+ GQ+VEA++V+DRVSDRSKGFG
Sbjct: 19  NSSASCFFTQRRGVASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFG 78

Query: 301 FVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPKARFDDGGMPIARGPPE 453
           FVTFAS DEA KA+ E NG+Q NGRVIFVD+AK K  F  G  PIARGPP+
Sbjct: 79  FVTFASVDEAQKALMEFNGQQFNGRVIFVDYAKAKQSFGGGRYPIARGPPD 129


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