BLASTX nr result

ID: Cnidium21_contig00010889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010889
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF75652.1| transcription factor DcERF2 [Daucus carota]           144   2e-59
ref|XP_002272426.1| PREDICTED: ethylene-responsive transcription...    55   2e-13
emb|CAN69221.1| hypothetical protein VITISV_012017 [Vitis vinifera]    55   2e-13
gb|AFK36443.1| unknown [Medicago truncatula]                           53   2e-13
gb|ADP37420.1| ethylene-responsive-element-binding factor 5 [Pet...    59   1e-12

>dbj|BAF75652.1| transcription factor DcERF2 [Daucus carota]
          Length = 259

 Score =  144 bits (364), Expect(2) = 2e-59
 Identities = 81/136 (59%), Positives = 96/136 (70%), Gaps = 7/136 (5%)
 Frame = +3

Query: 348 FNTPEXXXXXXXXXXKRIRGDKARLNFPDEQPPEE---PPLAKKQCRFRTTESTDLDSNF 518
           FNTPE          KRIRGDKARLNFP++QPPE    PPLAKKQC  +     +  +  
Sbjct: 123 FNTPEEAARAYDEAAKRIRGDKARLNFPEDQPPEPVPLPPLAKKQCTAKAITEINYPNFS 182

Query: 519 TP-MGIEFGTTFQPPNYYEIHADDELELKD-HRVLNLE-SILGWEAE-MSQISVTELDVH 686
           +P MG+EF TTFQPPNY    A DELELKD H+V N E  +LGWEAE M+QI VT+ DV+
Sbjct: 183 SPLMGMEFSTTFQPPNYC---ASDELELKDRHQVSNTEPCLLGWEAEIMTQIGVTDSDVY 239

Query: 687 EWMMMDNLDQVASHLM 734
           +WMMMDNLDQ+A+HLM
Sbjct: 240 QWMMMDNLDQIANHLM 255



 Score =  112 bits (279), Expect(2) = 2e-59
 Identities = 58/78 (74%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1   DLWDELGFASTLPGLFGSWTD-FDAKLPKLPLDGPTPKPSKIINKEEVIDL-TEKTSQET 174
           DLWD+ GFASTLP L GSWTD F+AKLP+LPL GP  KP KII KEEV +   EK SQE 
Sbjct: 26  DLWDQPGFASTLPQLSGSWTDHFEAKLPQLPLHGPPLKPKKIITKEEVSEEGDEKLSQEG 85

Query: 175 GKRSRKNKYRGIRQRPWG 228
            KRSRKNKYRGIRQRPWG
Sbjct: 86  NKRSRKNKYRGIRQRPWG 103


>ref|XP_002272426.1| PREDICTED: ethylene-responsive transcription factor RAP2-3 [Vitis
           vinifera] gi|296083324|emb|CBI22960.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score = 54.7 bits (130), Expect(2) = 2e-13
 Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
 Frame = +3

Query: 348 FNTPEXXXXXXXXXXKRIRGDKARLNFPDEQPPEEP-----PLAKKQCRFRTTESTDLDS 512
           +NT E          KRIRGDKA+LNF D   P  P     P +K++C           S
Sbjct: 119 YNTAEEAARAYDEAAKRIRGDKAKLNFADPSSPHFPPPIPLPPSKRRC---VVPDPTAQS 175

Query: 513 NFTPMGIEFGTTFQPPNYYEIHADDELELKDHRVLNLESILGWEAEMSQISVTEL----D 680
           ++ P  +        P  YE  A  ELE K+ ++ +LES+LG E E +   + E+     
Sbjct: 176 SYQPT-VPPPPLMTYPAPYENEAASELEFKE-QISSLESLLGLEPEQAATQLNEITESDS 233

Query: 681 VHEWMMMD 704
           V  WM+ D
Sbjct: 234 VDLWMLED 241



 Score = 47.8 bits (112), Expect(2) = 2e-13
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 1   DLWDELGFASTLPGLFGS--WTDFDAKLPKLPLDGPTPKPSKII-----NKEEVIDLTEK 159
           DLW EL   S L GL  +    DF+    ++      PKP ++      N ++ I + EK
Sbjct: 23  DLWSELDTISDLLGLDSANGGDDFNPSENRV-----APKPKQVSKGTNENTQKAIRVEEK 77

Query: 160 TSQETGKRSRKNKYRGIRQRPWG 228
            S  T  R RKN YRGIRQRPWG
Sbjct: 78  KSTTT-PRIRKNVYRGIRQRPWG 99


>emb|CAN69221.1| hypothetical protein VITISV_012017 [Vitis vinifera]
          Length = 259

 Score = 54.7 bits (130), Expect(2) = 2e-13
 Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
 Frame = +3

Query: 348 FNTPEXXXXXXXXXXKRIRGDKARLNFPDEQPPEEP-----PLAKKQCRFRTTESTDLDS 512
           +NT E          KRIRGDKA+LNF D   P  P     P +K++C           S
Sbjct: 119 YNTAEEAARAYDEAAKRIRGDKAKLNFADPSSPHFPPPIPLPPSKRRC---VVPDPTAQS 175

Query: 513 NFTPMGIEFGTTFQPPNYYEIHADDELELKDHRVLNLESILGWEAEMSQISVTEL----D 680
           ++ P  +        P  YE  A  ELE K+ ++ +LES+LG E E +   + E+     
Sbjct: 176 SYQPT-VPPPPLMTYPAPYENEAASELEFKE-QISSLESLLGLEPEQAATQLNEITESDS 233

Query: 681 VHEWMMMD 704
           V  WM+ D
Sbjct: 234 VDLWMLED 241



 Score = 47.8 bits (112), Expect(2) = 2e-13
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 1   DLWDELGFASTLPGLFGS--WTDFDAKLPKLPLDGPTPKPSKII-----NKEEVIDLTEK 159
           DLW EL   S L GL  +    DF+    ++      PKP ++      N ++ I + EK
Sbjct: 23  DLWSELDTISDLLGLDSANGGDDFNPSENRV-----APKPKQVSKGTSENTQKAIRVEEK 77

Query: 160 TSQETGKRSRKNKYRGIRQRPWG 228
            S  T  R RKN YRGIRQRPWG
Sbjct: 78  KSTTT-PRIRKNVYRGIRQRPWG 99


>gb|AFK36443.1| unknown [Medicago truncatula]
          Length = 259

 Score = 52.8 bits (125), Expect(2) = 2e-13
 Identities = 37/104 (35%), Positives = 50/104 (48%)
 Frame = +3

Query: 348 FNTPEXXXXXXXXXXKRIRGDKARLNFPDEQPPEEPPLAKKQCRFRTTESTDLDSNFTPM 527
           F+T E          KRIRGDKA+LNFPD      PP AKKQC      S+   S     
Sbjct: 125 FSTAEEAARAYDTAAKRIRGDKAKLNFPDTPAVTAPP-AKKQCVSSDQASSQASSESAGS 183

Query: 528 GIEFGTTFQPPNYYEIHADDELELKDHRVLNLESILGWEAEMSQ 659
           G E               D+E+E+K  ++ +LE ILG ++++ Q
Sbjct: 184 GFEL--------------DEEMEIK-QKMSDLEWILGLDSDIPQ 212



 Score = 49.7 bits (117), Expect(2) = 2e-13
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
 Frame = +1

Query: 1   DLWDELGFASTLPGLFGSW------TDFDAKLPKLPLDGPTPKPSKIIN-----KEEVID 147
           DLW EL  +  L GL G+       T    +LP L  +      +K+++     K++ + 
Sbjct: 18  DLWFELDPSVDLLGLGGAAAAAAFNTPSSKELPPLSFEKFFSSDNKVVSCDNVEKKQSLV 77

Query: 148 LTEKTSQETG-KRSRKNKYRGIRQRPWG 228
             EK  + TG KR+RKN YRGIRQRPWG
Sbjct: 78  TVEKGKKSTGGKRARKNVYRGIRQRPWG 105


>gb|ADP37420.1| ethylene-responsive-element-binding factor 5 [Petunia x hybrida]
          Length = 266

 Score = 58.5 bits (140), Expect(2) = 1e-12
 Identities = 51/147 (34%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
 Frame = +3

Query: 348 FNTPEXXXXXXXXXXKRIRGDKARLNFPD---EQPPEEPPLAKKQCRFRTTESTDL--DS 512
           FNT E          KRIRGDKA+LNFP+      P  PP AK+QC     +   L   S
Sbjct: 124 FNTAEEAARAYDEAAKRIRGDKAKLNFPEPPSTSVPPTPPPAKRQCTSTIPDQLALLESS 183

Query: 513 NF---TPMGIEFGTTFQPPNYYEI--------HADDELELKDHRVLNLESILGWEAEMSQ 659
           NF    P  + FG   Q P YY +        H D EL+    ++ NLES L  E + SQ
Sbjct: 184 NFMTENPSLMNFGYQNQTP-YYPVEMAAGEDHHQDYELK---EQISNLESFLELEPDSSQ 239

Query: 660 IS-VTELDVHEWMMMDNLDQVASHLMY 737
            S   + D     +M+++      L Y
Sbjct: 240 YSGFGDSDPLNLFLMEDIAATQQQLFY 266



 Score = 40.8 bits (94), Expect(2) = 1e-12
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 166 QETGKRSRKNKYRGIRQRPWG 228
           + +G R RKNKYRGIRQRPWG
Sbjct: 84  ESSGPRPRKNKYRGIRQRPWG 104


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