BLASTX nr result

ID: Cnidium21_contig00010882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010882
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243...   291   2e-76
ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|2...   283   5e-74
ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arab...   282   1e-73
ref|NP_566568.1| Translation elongation factor EF1B/ribosomal pr...   279   1e-72
gb|AAM62870.1| unknown [Arabidopsis thaliana]                         279   1e-72

>ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera]
            gi|296083213|emb|CBI22849.3| unnamed protein product
            [Vitis vinifera]
          Length = 301

 Score =  291 bits (746), Expect = 2e-76
 Identities = 158/254 (62%), Positives = 186/254 (73%), Gaps = 2/254 (0%)
 Frame = -3

Query: 1076 KNNKK--VDTHSFVVKPDESAGVFPEAVLLKQKKVQEDGRLLPEFEDAEEQELYEALNLL 903
            K  KK  VD H+FV KPDE+ GVFPEAVLLK+KK QEDG  LPEF DAEE+ELYE LNL 
Sbjct: 58   KKRKKDSVDAHNFVPKPDEATGVFPEAVLLKEKKAQEDGSFLPEFADAEEEELYEFLNLQ 117

Query: 902  LESDLDVDRVRHYEVVYLIHEKFVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKI 723
            LESDL+V+R+RHYEVVYLIHEK  +EVE+VN KVQ+F++EKKGK+WR +DWGLRRLAYKI
Sbjct: 118  LESDLNVERMRHYEVVYLIHEKHDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKI 177

Query: 722  QKAKNAHYILMNFELEAKDINDFKSMLDKDERVIRHLVIKRDEAITEVCPPPLEFHSMRA 543
            QKAKNAHYILMNFELEA+ INDFK+MLD+DERVIRHLVIKRDEAITE CPPP EFH++RA
Sbjct: 178  QKAKNAHYILMNFELEAQWINDFKTMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRA 237

Query: 542  GAXXXXXXXXXXXXXXXXXXXXXXXXELQVASLDNVKEESIIYVDEDDGQENGRPINFGA 363
            G                         +    S D V  + I+ V+ DD ++     N G 
Sbjct: 238  GTDDYDDEEDDVDYDDEDDWDGEGEVDSNSYSDDVV--DVIVPVNSDDREDK----NVG- 290

Query: 362  STRRKKLKAQKVGR 321
               R+ L+A+KVGR
Sbjct: 291  ---RRNLRAEKVGR 301


>ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|222851192|gb|EEE88739.1|
            predicted protein [Populus trichocarpa]
          Length = 319

 Score =  283 bits (725), Expect = 5e-74
 Identities = 150/255 (58%), Positives = 181/255 (70%), Gaps = 10/255 (3%)
 Frame = -3

Query: 1079 DKNNKK--VDTHSFVVKPDESAGVFPEAVLLKQKKVQEDGRLLPEFEDAEEQELYEALNL 906
            + NNKK   DTHSFV KPDE+ G FPEA+LLK+KK QEDGR+LPEF DAEE++L+E LNL
Sbjct: 62   NNNNKKNKQDTHSFVAKPDEAIGPFPEAILLKEKKAQEDGRVLPEFADAEEEKLFEFLNL 121

Query: 905  LLESDLDVDRVRHYEVVYLIHEKFVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYK 726
             L+S+L V+R+RHYEVVYLIHEK  +EV S+N KVQ+F++EKKG++WRF+DWG+RRLAYK
Sbjct: 122  ELQSELKVERLRHYEVVYLIHEKHDEEVGSLNEKVQDFVREKKGRIWRFNDWGMRRLAYK 181

Query: 725  IQKAKNAHYILMNFELEAKDINDFKSMLDKDERVIRHLVIKRDEAITEVCPPPLEFHSMR 546
            IQKAKNAHYILMNFELEA+ INDFK+MLDKDERVIRHLVIKRDEAITE CPPP EFH+++
Sbjct: 182  IQKAKNAHYILMNFELEARWINDFKNMLDKDERVIRHLVIKRDEAITEDCPPPPEFHTLQ 241

Query: 545  AGAXXXXXXXXXXXXXXXXXXXXXXXXELQVASLDNVKEESII-------YVDEDDGQEN 387
             G                         E +    D  + E  +       Y ++DDG   
Sbjct: 242  GGMDNNDEEDGLDYDDNDEAYDEDLEVEAEAVYGDGDEAEGSVSVISLHGYKEDDDGNNE 301

Query: 386  GRPINF-GASTRRKK 345
             R   F  AS  RKK
Sbjct: 302  VRHSKFASASNTRKK 316


>ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
            lyrata] gi|297331029|gb|EFH61448.1| hypothetical protein
            ARALYDRAFT_318480 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  282 bits (722), Expect = 1e-73
 Identities = 133/179 (74%), Positives = 158/179 (88%)
 Frame = -3

Query: 1076 KNNKKVDTHSFVVKPDESAGVFPEAVLLKQKKVQEDGRLLPEFEDAEEQELYEALNLLLE 897
            K +KK D HSF  +PDE+ G FPE++LLK+KK+ E+G LLPEF DAEE+ELYE L+L L+
Sbjct: 53   KKSKKDDNHSFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYEFLDLQLQ 112

Query: 896  SDLDVDRVRHYEVVYLIHEKFVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQK 717
            SDL+ +R+RHYEVVYLIHEK  +EVES+N KVQ+FLKEKKGKVWRFSDWG+RRLAYKIQK
Sbjct: 113  SDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDFLKEKKGKVWRFSDWGMRRLAYKIQK 172

Query: 716  AKNAHYILMNFELEAKDINDFKSMLDKDERVIRHLVIKRDEAITEVCPPPLEFHSMRAG 540
            A+NAHYILMNFE+EAK +N+FK +LD DERVIRHLV+KRDEAITE CPPP EFHS+RAG
Sbjct: 173  AENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


>ref|NP_566568.1| Translation elongation factor EF1B/ribosomal protein S6 family
            protein [Arabidopsis thaliana]
            gi|15620810|dbj|BAB67768.1| RPS6-like protein
            [Arabidopsis thaliana] gi|18377866|gb|AAL67119.1|
            AT3g17170/K14A17_29 [Arabidopsis thaliana]
            gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29
            [Arabidopsis thaliana] gi|332642393|gb|AEE75914.1|
            Translation elongation factor EF1B/ribosomal protein S6
            family protein [Arabidopsis thaliana]
          Length = 314

 Score =  279 bits (713), Expect = 1e-72
 Identities = 130/179 (72%), Positives = 158/179 (88%)
 Frame = -3

Query: 1076 KNNKKVDTHSFVVKPDESAGVFPEAVLLKQKKVQEDGRLLPEFEDAEEQELYEALNLLLE 897
            K +KK D H+F  +PDE+ G FPE++LLK+KK+ E+G LLPEF DAEE+ELY+ L+L L+
Sbjct: 53   KKSKKDDNHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQ 112

Query: 896  SDLDVDRVRHYEVVYLIHEKFVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQK 717
            SDL+ +R+RHYEVVYLIHEK  +EVES+N KVQ++LKEKKGKVWRFSDWG+RRLAYKIQK
Sbjct: 113  SDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQK 172

Query: 716  AKNAHYILMNFELEAKDINDFKSMLDKDERVIRHLVIKRDEAITEVCPPPLEFHSMRAG 540
            A+NAHYILMNFE+EAK +N+FK +LD DERVIRHLV+KRDEAITE CPPP EFHS+RAG
Sbjct: 173  AENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


>gb|AAM62870.1| unknown [Arabidopsis thaliana]
          Length = 314

 Score =  279 bits (713), Expect = 1e-72
 Identities = 130/179 (72%), Positives = 158/179 (88%)
 Frame = -3

Query: 1076 KNNKKVDTHSFVVKPDESAGVFPEAVLLKQKKVQEDGRLLPEFEDAEEQELYEALNLLLE 897
            K +KK D H+F  +PDE+ G FPE++LLK+KK+ E+G LLPEF DAEE+ELY+ L+L L+
Sbjct: 53   KKSKKDDNHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQ 112

Query: 896  SDLDVDRVRHYEVVYLIHEKFVDEVESVNLKVQEFLKEKKGKVWRFSDWGLRRLAYKIQK 717
            SDL+ +R+RHYEVVYLIHEK  +EVES+N KVQ++LKEKKGKVWRFSDWG+RRLAYKIQK
Sbjct: 113  SDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQK 172

Query: 716  AKNAHYILMNFELEAKDINDFKSMLDKDERVIRHLVIKRDEAITEVCPPPLEFHSMRAG 540
            A+NAHYILMNFE+EAK +N+FK +LD DERVIRHLV+KRDEAITE CPPP EFHS+RAG
Sbjct: 173  AENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


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