BLASTX nr result
ID: Cnidium21_contig00010880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010880
(2265 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 534 e-149
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 489 e-135
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 486 e-134
ref|XP_002525676.1| transcription initiation factor brf1, putati... 480 e-133
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 451 e-124
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 534 bits (1376), Expect = e-149
Identities = 298/609 (48%), Positives = 390/609 (64%), Gaps = 18/609 (2%)
Frame = -2
Query: 2123 WCDNCGSNRDTQSLDDGRLCCGFCGKILVEDNYSEEVTFAKDAGGQSRAQGT-LNRFASG 1947
WC NC + T+ L +G LCC CGK++ +DN+S + F K+A GQS+ G + S
Sbjct: 3 WCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQSD 62
Query: 1946 YSASRDRTLDGAYDDMQWMLSSVFNDDDSNVLRRARNFYRIALERNFTKGRPKQLVEAAC 1767
YSASR+RTL+ AY ++ + +++ +++R A FY IALERNFT+GR K+ V AAC
Sbjct: 63 YSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAAC 122
Query: 1766 LYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYXXXXXXXXXXXXXSIQKAVDPSLFI 1587
LY+ACR ++ KP+LLI+F+E L NVY LGAV+ +QK VDPSLFI
Sbjct: 123 LYIACRENK---KPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFI 179
Query: 1586 HRFANRLLGQTDVNVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTKSH 1407
HRFA L G+T++ V TAL+IIASMKRDW+QTGRKPSGLCGAALYISA+S+G +K+
Sbjct: 180 HRFAAGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTD 239
Query: 1406 IVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDAELRSVGQTTVGIKSSDGSE 1227
IVK+VHICEATLTKRLIEFENTESGSLTI+EF KAE+L+ E S Q+ +G E
Sbjct: 240 IVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGE 299
Query: 1226 VLCKHK--GEPTFAHGLCRECYAEFMNFSGGLDGESEPPAFQRAQQDRMEKEYAEKNALD 1053
+LC+HK G+P FAHGLC CY EF+ SGGL+G SEPPAFQRA++DRM K AE+NA
Sbjct: 300 LLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENA-- 357
Query: 1052 SSCDIMAVQGPNSNFKEYDKSSEIPGESRDENLQSTEDGNAGGATKHVPIDDA------- 894
+SN + DK S P +E+ + E + G + K ID+
Sbjct: 358 -----------DSNQIQLDKGSSSPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLHG 406
Query: 893 --DNMSCKSPESETLSDIEDLEVDNYIHTAEETQYKKIIWEELNREYVEEQLXXXXXXXX 720
D + ESE+LSDI+D+EVD Y+H +E Q+KKIIWE +N+EY+EEQ
Sbjct: 407 ADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLEEQAAKEAAAAA 466
Query: 719 XXXXXXAHLRNCPEDMEDXXXXXXXXXXAMEQSKKERRQKRAAEAKNAAPPQTAAEATRQ 540
A ++ PE ++ A+ +S+KER+QKRAAEAKN P QTAAEATRQ
Sbjct: 467 AKEAYEASFKDNPEGLKAAQELAAATAAAVAKSRKERQQKRAAEAKNTVPAQTAAEATRQ 526
Query: 539 MIRKKRLASKINYDVLDELFNDSSSPDN-KKSRPNDEVDNSGTEYSKQNVK---QNDSEL 372
M+ KKRL+SKINYDVL++LF+DS +N KK R + +N+ + N K + D
Sbjct: 527 MLTKKRLSSKINYDVLEKLFDDSVPSENPKKIRTESQTENNDHKAPISNKKLEPEEDDLA 586
Query: 371 PETE--YEG 351
PE E YEG
Sbjct: 587 PEDEFGYEG 595
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 489 bits (1259), Expect = e-135
Identities = 294/655 (44%), Positives = 382/655 (58%), Gaps = 48/655 (7%)
Frame = -2
Query: 2123 WCDNCGSNRDTQSLDDGRLCCGFCGKILVEDNYSEEVTFAKDAGGQSRAQGTLNR-FASG 1947
WC NC N + G L C CGK+L N+S+E TF KD+GGQS+ G R S
Sbjct: 3 WCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQSN 62
Query: 1946 YSASRDRTLDGAYDDMQWMLSSVFNDDDSNVLRRARNFYRIALERNFTKGRPKQLVEAAC 1767
YSASR+RTL+ A++DM++M + + + ++R A FYRIALERNFT+GR + V+AAC
Sbjct: 63 YSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNAEFVQAAC 122
Query: 1766 LYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYXXXXXXXXXXXXXSIQKAVDPSLFI 1587
LY+ACR KPYLLI+F+ +L NVY LGAV+ +QK VDPSLFI
Sbjct: 123 LYIACREKN---KPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFI 179
Query: 1586 HRFANRLLGQTDVN-----VETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYS 1422
+F LLG T + V TALKII SMKRDWMQTGRKPSGLCGAALYISA+S+G
Sbjct: 180 DKFTQCLLGGTKDDGMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVK 239
Query: 1421 YTKSHIVKVVHICEATLTKRLIEFENTESGSLT--------------------------- 1323
TKS I+K+VHIC+ATLTKRLIEFENTESGSLT
Sbjct: 240 CTKSDIIKIVHICDATLTKRLIEFENTESGSLTNTCLLILVQALQHIDLLEYLPSGHADI 299
Query: 1322 -----IDEFTQKAEKLDAELRSVGQTTVGIKSSDGSEVLCKHKGE--PTFAHGLCRECYA 1164
++EF A+K L+ T ++ EVLC HK E +A GLCR CY
Sbjct: 300 SEKMNMEEFIVMADK----LKGSNSYTNNGSNALSDEVLCVHKNECQKPYALGLCRSCYD 355
Query: 1163 EFMNFSGGLDGESEPPAFQRAQQDRMEKEYAEKNALDSSCDIMAVQG---PNSNFKEYDK 993
+F+ SGGLDG S PPAFQ A+++RMEK E+ + D S QG N+ KE D
Sbjct: 356 DFVELSGGLDGGSNPPAFQSAEKERMEKATVEEGSDDCSAIGKFSQGLKPCNNTEKESDN 415
Query: 992 SSEIPGES---RDENLQSTEDGNAGGATKHVPIDDADNMSCKSPESETLSDIEDLEVDNY 822
E+ ++ + T D G + D +C S +SE SDI+D+EVD Y
Sbjct: 416 VHVDASETASFKEAEAKGTADEQRGPDDDVNKVGADDLGTCASDDSENWSDIDDVEVDGY 475
Query: 821 IHTAEETQYKKIIWEELNREYVEEQLXXXXXXXXXXXXXXAHLRNCPEDMEDXXXXXXXX 642
+H EE YKKIIWEE+NREY+EEQ A+ +NC ED++
Sbjct: 476 LHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAA 535
Query: 641 XXAMEQSKKERRQKRAAEAKNAAPPQTAAEATRQMIRKKRLASKINYDVLDELFNDSSSP 462
A+ +S+KER++KRAAEAKNA P QTAAEATRQM+ KKRL+SKINYDVLD+LF++S+
Sbjct: 536 AAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGM 595
Query: 461 DNKKSRPNDEVDNSGTEYSKQNVKQ-NDSELPETEYEGGAE-EFSEDLHYGNVEE 303
+ + +E TE ++ K+ +E E +Y+ G + + L+Y N+EE
Sbjct: 596 EPSAKKKCEE-QAEETEKTRNTTKEFETTEEQEEDYDDGYDGTYGSGLYYENMEE 649
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 486 bits (1250), Expect = e-134
Identities = 295/653 (45%), Positives = 379/653 (58%), Gaps = 47/653 (7%)
Frame = -2
Query: 2123 WCDNCGSNRDTQSLDDGRLCCGFCGKILVEDNYSEEVTFAKDAGGQSRAQGTLNR-FASG 1947
WC NC N + G L C CGK+L N+S+E TF KD+GGQS+ G R S
Sbjct: 3 WCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQSN 62
Query: 1946 YSASRDRTLDGAYDDMQWMLSSVFNDDDSNVLRRARNFYRIALERNFTKGRPKQLVEAAC 1767
YSASR+RTL+ A++DM++M + + + ++R A FYRIALERNFT+GR + V+AAC
Sbjct: 63 YSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNAEFVQAAC 122
Query: 1766 LYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYXXXXXXXXXXXXXSIQKAVDPSLFI 1587
LY+ACR KPYLLI+F+ +L NVY LGAV+ +QK VDPSLFI
Sbjct: 123 LYIACREKN---KPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFI 179
Query: 1586 HRFANRLLGQTDVN-----VETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYS 1422
+F LLG T + V TALKII SMKRDWMQTGRKPSGLCGAALYISA+S+G
Sbjct: 180 DKFTQCLLGGTKDDGMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVK 239
Query: 1421 YTKSHIVKVVHICEATLTKRLIEFENTESGSLT--------------------------- 1323
TKS I+K+VHIC+ATLTKRLIEFENTESGSLT
Sbjct: 240 CTKSDIIKIVHICDATLTKRLIEFENTESGSLTNTCLLILVQALQHIDLLEYLPSGHADI 299
Query: 1322 -----IDEFTQKAEKLDAELRSVGQTTVGIKSSDGSEVLCKHKGE--PTFAHGLCRECYA 1164
++EF A+K L+ T S+ EVLC HK E +A GLCR CY
Sbjct: 300 SEKMNMEEFIVMADK----LKGSNSYTNNGSSALSDEVLCVHKNECQKPYALGLCRSCYD 355
Query: 1163 EFMNFSGGLDGESEPPAFQRAQQDRMEKEYAEKNALDSSCDIMAVQG---PNSNFKEYDK 993
+F+ SGGLDG S PPAFQ A+++RMEK E+ + D S QG N+ KE D
Sbjct: 356 DFVELSGGLDGGSNPPAFQSAEKERMEKATVEEGSDDCSAIGKFSQGLKPCNNTEKESDN 415
Query: 992 SSEIPGES---RDENLQSTEDGNAGGATKHVPIDDADNMSCKSPESETLSDIEDLEVDNY 822
E+ ++ + T D G + D +C S +SE SDI+D+EVD Y
Sbjct: 416 VHVDASETASFKEAEAKGTADEQRGPDDDVNKVGADDLGTCASDDSENWSDIDDVEVDGY 475
Query: 821 IHTAEETQYKKIIWEELNREYVEEQLXXXXXXXXXXXXXXAHLRNCPEDMEDXXXXXXXX 642
+H EE YKKIIWEE+NREY+EEQ A+ +NC ED++
Sbjct: 476 LHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAA 535
Query: 641 XXAMEQSKKERRQKRAAEAKNAAPPQTAAEATRQMIRKKRLASKINYDVLDELFNDSSSP 462
A+ +S+KER++KRAAEAKNA P QTAAEATRQM+ KKRL+SKINYDVLD+LF++S+
Sbjct: 536 AAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGM 595
Query: 461 DNKKSRPNDEVDNSGTEYSKQNVKQ-NDSELPETEYEGGAEEFSEDLHYGNVE 306
+ + +E TE ++ K+ +E E +Y+ G D YG+VE
Sbjct: 596 EPSAKKKCEE-QAEETEKTRNTTKEFETTEEQEEDYDDG-----YDGTYGSVE 642
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 480 bits (1236), Expect = e-133
Identities = 277/623 (44%), Positives = 377/623 (60%), Gaps = 16/623 (2%)
Frame = -2
Query: 2123 WCDNCGSNRDTQSLDDGRLCCGFCGKILVEDNYSEEVTFAKDAGGQSRAQGTLNRFASGY 1944
+C +C + DG L CG CG++L DNYS E TF K+A GQS+ G + R G
Sbjct: 3 FCKSCARDVPGYRDSDGILSCGKCGRVLKFDNYSTEATFVKNASGQSQMAGRIVRSIEGG 62
Query: 1943 SASRDRTLDGAYDDMQWMLSSVFNDDDSNVLRRARNFYRIALERNFTKGRPKQLVEAACL 1764
++SR R D AYDDM ++ + + ++ ++ +A +YRIA+ERNFTKGR + V+AACL
Sbjct: 63 NSSRQRLYDKAYDDMIYIKNGLDMGENLAIVDQAMMYYRIAVERNFTKGRRTEQVQAACL 122
Query: 1763 YVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYXXXXXXXXXXXXXSIQKAVDPSLFIH 1584
Y+ACR + KPYLLI+F+ FL N+Y LGAV+ QK +DPS+FIH
Sbjct: 123 YIACRENR---KPYLLIDFSNFLRINIYVLGAVFLQLCKVLNLTEHSICQKLLDPSIFIH 179
Query: 1583 RFANRLLGQTDVNVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTKSHI 1404
++ L G + ++ +AL IIASM RDWMQTGR+PSGL GAALYI+A+SHG + ++ I
Sbjct: 180 KYTASLSGGKNKDISDSALTIIASMNRDWMQTGRRPSGLWGAALYIAALSHGLTCSRKDI 239
Query: 1403 VKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDAELRSVGQTTVGIKSSDGSEV 1224
+K+VH+C+ATL+KRL+EFENTESGSLTI+E KAE+L S Q+ +K S E+
Sbjct: 240 LKLVHVCDATLSKRLVEFENTESGSLTIEEINAKAEELRES--STDQSNFVLKGSSSKEL 297
Query: 1223 LCKHKGEP--TFAHGLCRECYAEFMNFSGGLDGESEPPAFQRAQQDRMEKEYAEKNALDS 1050
LC+HKG +A+GLC+ CY F+ F GG S+PPAFQ+A++ R E A N DS
Sbjct: 298 LCQHKGTSRIPYAYGLCKGCYEYFIGFDGG----SDPPAFQQAERRRKENLSAMNNNNDS 353
Query: 1049 -SCDIMAVQGPNSNFKEYDKSSEIPGESRDENLQSTEDGNAGGATKHVPIDDA------- 894
S M ++K RDE L S + + G A H+P DD
Sbjct: 354 NSVSTMPFL--------FEKELNSQHADRDEQLLSKKAESTGEAALHLPADDGGYSKLHD 405
Query: 893 -DNMSCKS-PESETLSDIEDLEVDNYIHTAEETQYKKIIWEELNREYVEEQLXXXXXXXX 720
D+MS K+ ES+ SDI+D EVD Y+H EE Q+KKIIWEE+NREY+EEQ
Sbjct: 406 DDDMSSKALDESDNFSDIDDAEVDGYLHNEEEAQFKKIIWEEMNREYLEEQAAKEAVAAA 465
Query: 719 XXXXXXAHLRNCPEDMEDXXXXXXXXXXAMEQSKKERRQKRAAEAKNAAPPQTAAEATRQ 540
A ++CPE+M+ A+ +SKKE++QKRAAEAKN+ P Q+A+EA RQ
Sbjct: 466 AKEAWEAKFKDCPEEMQAARELEAAVAAALAKSKKEKQQKRAAEAKNSVPAQSASEAARQ 525
Query: 539 MIRKKRLASKINYDVLDELFNDSSSPDNKKSRPNDEVDNSGTEYSKQNVKQNDSELP--- 369
M+ KKRL+SKINYDVL++LF++ S D KK R E D E Q +ND P
Sbjct: 526 MLTKKRLSSKINYDVLEKLFDEPGSKDPKKLRTESESDTD--EKFPQTDDRNDDLGPGNK 583
Query: 368 -ETEYEGGAEEFSEDLHYGNVEE 303
E E + A +++ D + NV+E
Sbjct: 584 NEKEEDAEAYKYNNDQYDENVDE 606
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 451 bits (1161), Expect = e-124
Identities = 240/471 (50%), Positives = 313/471 (66%), Gaps = 12/471 (2%)
Frame = -2
Query: 2123 WCDNCGSNRDTQSLDDGRLCCGFCGKILVEDNYSEEVTFAKDAGGQSRAQGT-LNRFASG 1947
WC NC + T+ L +G LCC CGK++ +DN+S + F K+A GQS+ G + S
Sbjct: 3 WCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQSD 62
Query: 1946 YSASRDRTLDGAYDDMQWMLSSVFNDDDSNVLRRARNFYRIALERNFTKGRPKQLVEAAC 1767
YSASR+RTL+ AY ++ + +++ +++R A FY IALERNFT+GR K+ V AAC
Sbjct: 63 YSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAAC 122
Query: 1766 LYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYXXXXXXXXXXXXXSIQKAVDPSLFI 1587
LY+ACR ++ KP+LLI+F+E L NVY LGAV+ +QK VDPSLFI
Sbjct: 123 LYIACRENK---KPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFI 179
Query: 1586 HRFANRLLGQTDVNVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTKSH 1407
HRFA L G+T++ V TAL+IIASMKRDW+QTGRKPSGLCGAALYISA+S+G +K+
Sbjct: 180 HRFAAGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTD 239
Query: 1406 IVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDAELRSVGQTTVGIKSSDGSE 1227
IVK+VHICEATLTKRLIEFENTESGSLTI+EF KAE+L+ E S Q+ +G E
Sbjct: 240 IVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGE 299
Query: 1226 VLCKHK--GEPTFAHGLCRECYAEFMNFSGGLDGESEPPAFQRAQQDRMEKEYAEKNALD 1053
+LC+HK G+P FAHGLC CY EF+ SGGL+G SEPPAFQRA++DRM K AE+NA
Sbjct: 300 LLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENA-- 357
Query: 1052 SSCDIMAVQGPNSNFKEYDKSSEIPGESRDENLQSTEDGNAGGATKHVPIDDA------- 894
+SN + DK S P +E+ + E + G + K ID+
Sbjct: 358 -----------DSNQIQLDKGSSSPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLHG 406
Query: 893 --DNMSCKSPESETLSDIEDLEVDNYIHTAEETQYKKIIWEELNREYVEEQ 747
D + ESE+LSDI+D+EVD Y+H +E Q+KKIIWE +N+EY+EEQ
Sbjct: 407 ADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLEEQ 457