BLASTX nr result
ID: Cnidium21_contig00010878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010878
(2311 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 446 e-122
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 430 e-118
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 409 e-111
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2... 370 1e-99
ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containin... 364 6e-98
>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
product [Vitis vinifera]
Length = 450
Score = 446 bits (1146), Expect = e-122
Identities = 223/371 (60%), Positives = 261/371 (70%), Gaps = 27/371 (7%)
Frame = +2
Query: 1148 QYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHKMDRNGAGPVILNTLGLPMRQDEKPC 1327
QY GELP+R+GQPDC YFLKTG CKYGS+CKYHH DR+GAGPV LN +GLPMRQ+EKPC
Sbjct: 81 QYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVSLNIVGLPMRQEEKPC 140
Query: 1328 SYYMRTGACKFGIECKFHHPQPDPAVSV---TGPYHYGSTASS-----GLSYGGGLPAWS 1483
SYYMRTG CKFG CKFHHPQP A +V TGP +GST SS GL Y GGLPAWS
Sbjct: 141 SYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWS 200
Query: 1484 LSKTTYLSAPPHSGGQQTYVPVIYPPSQGMVSTPEWNTYMSNMSPAPPTNVYG------- 1642
L + Y+ P G QTY+P++ PSQG+V WNTYM NMSP T + G
Sbjct: 201 LPRAPYIPGP-RMQGPQTYMPIVLSPSQGIVPAQGWNTYMGNMSPISSTGILGSNLVYNS 259
Query: 1643 ----QSGYSGQIPLSYSGVSNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAA 1810
+SG SGQ+ L S + +LPERPDQPECRYFM+TGSCKYG DCKYHHP+E+IAQLA
Sbjct: 260 RNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLAT 319
Query: 1811 GSIGPLGLPLRPGQAVCSYYSMYGLCKFGPTCRYDHPFLGY-SYNYGSNLPAVSIHSTN- 1984
++GPLGLPLRPGQAVCS+Y++YGLCK+GPTC++DHP GY SYNY +LP +SI +
Sbjct: 320 NTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYSSYNYCLSLPPLSILDPSL 379
Query: 1985 FSYQQNLPAVHSWETSPSKSPKFYNWTTKQEAASNKKS--DAKAPEESPEQA----RSPS 2146
YQ+N VHS ETSPSKS KF +W K E+ S K D KAPE PEQA S
Sbjct: 380 LPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPDTKAPEGPPEQAGSLLHSSP 439
Query: 2147 AEAEIPEGHSD 2179
+E P+ SD
Sbjct: 440 NSSEPPQDQSD 450
Score = 73.9 bits (180), Expect = 2e-10
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 1688 SNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSY 1867
S P+RP +P+C Y++ TG C YG +C+++HP A G+ LP R GQ C Y
Sbjct: 42 SPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHP----AYSEQGAQYRGELPERVGQPDCGY 97
Query: 1868 YSMYGLCKFGPTCRYDHP 1921
+ G CK+G TC+Y HP
Sbjct: 98 FLKTGTCKYGSTCKYHHP 115
>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 430 bits (1105), Expect = e-118
Identities = 223/402 (55%), Positives = 261/402 (64%), Gaps = 58/402 (14%)
Frame = +2
Query: 1148 QYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHKMDRNGAGPVILNTLGLPMRQDEKPC 1327
QY GELP+R+GQPDC YFLKTG CKYGS+CKYHH DR+GAGPV LN +GLPMRQ+EKPC
Sbjct: 60 QYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPC 119
Query: 1328 SYYMRTGACKFGIECKFHHPQPDPAVSV---TGPYHYGSTASS-----GLSYGGGLPAWS 1483
SYYMRTG CKFG CKFHHPQP A +V TGP +GST SS GL Y GGLPAWS
Sbjct: 120 SYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWS 179
Query: 1484 LSKTTYLSAPPHSGGQQTYVPVIYPPSQGMVSTPEWNTYM-------------------- 1603
L + Y+ P G QTY+P++ PSQG+V WNTYM
Sbjct: 180 LPRAPYIPGP-RMQGPQTYMPIVLSPSQGIVPAQGWNTYMPHFLVLMKSFHVVNLVYSID 238
Query: 1604 -----------SNMSPAPPTNVYG-----------QSGYSGQIPLSYSGVSNLPERPDQP 1717
NMSP T + G +SG SGQ+ L S + +LPERPDQP
Sbjct: 239 PNEFVICEIPRGNMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQP 298
Query: 1718 ECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSYYSMYGLCKFG 1897
ECRYFM+TGSCKYG DCKYHHP+E+IAQLA ++GPLGLPLRPGQAVCS+Y++YGLCK+G
Sbjct: 299 ECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYG 358
Query: 1898 PTCRYDHPFLGY-SYNYGSNLPAVSIHSTN-FSYQQNLPAVHSWETSPSKSPKFYNWTTK 2071
PTC++DHP GY SYNY +LP +SI + YQ+N VHS ETSPSKS KF +W K
Sbjct: 359 PTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQK 418
Query: 2072 QEAASNKKS--DAKAPEESPEQA----RSPSAEAEIPEGHSD 2179
E+ S K D KAPE PEQA S +E P+ SD
Sbjct: 419 TESGSTKSQNPDTKAPEGPPEQAGSLLHSSPNSSEPPQDQSD 460
Score = 73.9 bits (180), Expect = 2e-10
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 1688 SNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSY 1867
S P+RP +P+C Y++ TG C YG +C+++HP A G+ LP R GQ C Y
Sbjct: 21 SPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHP----AYSEQGAQYRGELPERVGQPDCGY 76
Query: 1868 YSMYGLCKFGPTCRYDHP 1921
+ G CK+G TC+Y HP
Sbjct: 77 FLKTGTCKYGSTCKYHHP 94
>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein, putative
[Ricinus communis]
Length = 456
Score = 409 bits (1051), Expect = e-111
Identities = 205/369 (55%), Positives = 247/369 (66%), Gaps = 27/369 (7%)
Frame = +2
Query: 1148 QYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHKMDRNGAGPVILNTLGLPMRQDEKPC 1327
Q+ ELP+R+GQPDC Y+LKTG CKYGS+CKYHH DRNGAGPV N +GLPMRQDEK C
Sbjct: 88 QFKEELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPVSFNIVGLPMRQDEKSC 147
Query: 1328 SYYMRTGACKFGIECKFHHPQPDP---AVSVTGPYHYGSTASS-----GLSYGGGLPAWS 1483
YYMRTG+CKFG+ CKFHHPQP P + TGP G ASS GL Y GGLP WS
Sbjct: 148 PYYMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWS 207
Query: 1484 LSKTTYLSAPPHSGGQQTYVPVIYPPSQGMVSTPEWNTYMSNMSPAPPTNVYG------- 1642
L + Y+S P G QTY+P + PSQG+V+ WNTY+ N+SP +V G
Sbjct: 208 LPRAPYVSGP-RLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSPMSSGSVLGSSIVYNS 266
Query: 1643 ----QSGYSGQIPLSYSGVSNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAA 1810
+SG SGQ+ + + SNLPERPDQPECRYFMNTG+CKYG DCKYHHP+E+IAQLA
Sbjct: 267 RNQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLAT 326
Query: 1811 GSIGPLGLPLRPGQAVCSYYSMYGLCKFGPTCRYDHPFLGYSYNYGSNLPAVS-IHSTNF 1987
SIGP+GLP RPGQ +CS YSMYGLCKFGPTCR+DHPF GY Y Y +L +S I S+
Sbjct: 327 NSIGPVGLPSRPGQPICSNYSMYGLCKFGPTCRFDHPFTGYPYGYSLSLQPLSIIDSSLL 386
Query: 1988 SYQQNLPAVHSWETSPSKSPKFYNWTTKQEAASNKKSDA----KAPEESPEQARSP---S 2146
SY + P S E+ S S KF +W + AS+K ++ K ++ PEQA SP S
Sbjct: 387 SYPRMSPPALSSESPISLSSKFPDWVQNPDGASSKHQNSDRNTKISDDQPEQAGSPPPHS 446
Query: 2147 AEAEIPEGH 2173
++A H
Sbjct: 447 SQASSEPSH 455
Score = 76.3 bits (186), Expect = 3e-11
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 1688 SNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSY 1867
S P+RP +P+C Y++ TG C YG +C+++HP A G+ LP R GQ C Y
Sbjct: 49 SPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHP----PYAAQGNQFKEELPERVGQPDCGY 104
Query: 1868 YSMYGLCKFGPTCRYDHP 1921
Y G CK+G TC+Y HP
Sbjct: 105 YLKTGTCKYGSTCKYHHP 122
>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
predicted protein [Populus trichocarpa]
Length = 450
Score = 370 bits (949), Expect = 1e-99
Identities = 184/365 (50%), Positives = 231/365 (63%), Gaps = 27/365 (7%)
Frame = +2
Query: 1160 ELPQRIGQPDCEYFLKTGMCKYGSSCKYHHKMDRNGAGPVILNTLGLPMRQDEKPCSYYM 1339
ELP+RIGQPDC Y++KTG CKYGS+CKYHH DRNGAGPV N LGLPMRQDEK C YYM
Sbjct: 87 ELPERIGQPDCGYYIKTGTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYM 146
Query: 1340 RTGACKFGIECKFHHPQP---DPAVSVTGPYHYGSTAS-----SGLSYGGGLPAWSLSKT 1495
RT +CKFG+ CKFHHPQP ++ +TG +GST S SGL Y GGLP WSL +
Sbjct: 147 RTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRA 206
Query: 1496 TYLSAPPHSGGQQTYVPVIYPPSQGMVSTPEWNTYMSNMSPAPPTNV-----------YG 1642
+ H G Q Y+PV+ PSQG+V P WNTY+ N +P +++ +G
Sbjct: 207 PPYMSGTHLQGPQAYMPVVVSPSQGIVPVPGWNTYVGNSNPMSSSSILGSNRAYDSRNHG 266
Query: 1643 QSGYSGQIPLSYSGVSNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIG 1822
SG SG L + + LPERPDQPECR+FM++G+CKYG DCKYHHP+E+IAQLA ++G
Sbjct: 267 DSGSSGH--LLSTAIPALPERPDQPECRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMG 324
Query: 1823 PLGLPLRPGQAVCSYYSMYGLCKFGPTCRYDHPFLGYSYNYGSNLPAVSIHSTNFSYQQN 2002
P GLPLRPGQAVC YSMYG+CKFGPTCRYDHP Y YNY +LP++S+ ++
Sbjct: 325 PFGLPLRPGQAVCPDYSMYGICKFGPTCRYDHPLPTYPYNYSLSLPSLSMMDSSLVTYPR 384
Query: 2003 LPAVHSWETSPSKSPKFYNWTTKQEAAS-----NKKSDAKAPEESPEQARSP---SAEAE 2158
+ +P K + + AS N S+ K ++ E A SP S++A
Sbjct: 385 MAQAALSSATPVSLSKLPDLIRNPDGASYNKHQNSDSNTKTLDDPTEHAGSPPPHSSQAS 444
Query: 2159 IPEGH 2173
H
Sbjct: 445 SEPSH 449
Score = 75.9 bits (185), Expect = 5e-11
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +2
Query: 1688 SNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSY 1867
S P+RP P+C Y++ TG C YG +C+Y+HP A G+ LP R GQ C Y
Sbjct: 44 SPYPDRPGVPDCGYYLRTGLCGYGSNCRYNHP----IYAAQGTQLREELPERIGQPDCGY 99
Query: 1868 YSMYGLCKFGPTCRYDHP 1921
Y G CK+G TC+Y HP
Sbjct: 100 YIKTGTCKYGSTCKYHHP 117
>ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis
sativus] gi|449515163|ref|XP_004164619.1| PREDICTED: zinc
finger CCCH domain-containing protein 3-like [Cucumis
sativus]
Length = 430
Score = 364 bits (934), Expect = 6e-98
Identities = 181/351 (51%), Positives = 230/351 (65%), Gaps = 11/351 (3%)
Frame = +2
Query: 1151 YGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHKMDRNGAGPVILNTLGLPMRQDEKPCS 1330
Y GELP+RIGQPDCEYFLKTG CKYG SCKYHH DR GAGPV N LGLPMRQ+EK C
Sbjct: 81 YNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCP 140
Query: 1331 YYMRTGACKFGIECKFHHPQPDPAVSVTGPYHYGSTASSGL----SYGGGLPAWSLSKTT 1498
YY+RTG+CKFG+ CKF+HPQP P ++ G+ S G S G PAWS+ +
Sbjct: 141 YYLRTGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSGGTPFMPSSGVPYPAWSMPRVQ 200
Query: 1499 YLSAPPHSGGQQTYVPVIYPPSQGMVSTPEWNTYMSNMSPAPP----TNVYGQSGYS-GQ 1663
Y+ P GQQ+YVPV+ PSQG ++ +WNTY+SN++P P N+ + YS GQ
Sbjct: 201 YMPGPCVQ-GQQSYVPVLVSPSQGAIAAQDWNTYVSNVNPILPNLGYNNINLEDSYSNGQ 259
Query: 1664 IPLSYSGVSNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLR 1843
+ LS S LP+RPDQPECRYFMN G+CKYG DCK+HHP+++IAQ A + LGLP R
Sbjct: 260 LALSTS-TPTLPDRPDQPECRYFMNNGTCKYGSDCKFHHPKQRIAQSATNA---LGLPSR 315
Query: 1844 PGQAVCSYYSMYGLCKFGPTCRYDHPFLGYSYNYGSNLPAVSIHSTNFSYQQNLPAVHSW 2023
PGQA+CSYY+MYGLCK+GP+C++DHP Y YNYG LP + S+ Y N + S
Sbjct: 316 PGQAICSYYNMYGLCKYGPSCKFDHPSPTYPYNYGFTLPL--LDSSIIKYPSNNFTMSSH 373
Query: 2024 ETSPSKSPKFYNWTTKQEAASNKK--SDAKAPEESPEQARSPSAEAEIPEG 2170
ET P K W K + ++NK+ +D+K +S + + S +P G
Sbjct: 374 ETLPGTVSKSSEWVQKADPSNNKRRTTDSKVIIDSTGE-EATSVSCSLPGG 423
Score = 78.2 bits (191), Expect = 9e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +2
Query: 1688 SNLPERPDQPECRYFMNTGSCKYGWDCKYHHPREKIAQLAAGSIGPLGLPLRPGQAVCSY 1867
S P+RP +P+C Y+M TGSC YG +C+++HP + G++ LP R GQ C Y
Sbjct: 41 SPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP----VYVGQGALYNGELPERIGQPDCEY 96
Query: 1868 YSMYGLCKFGPTCRYDHP 1921
+ G CK+G +C+Y HP
Sbjct: 97 FLKTGTCKYGGSCKYHHP 114