BLASTX nr result

ID: Cnidium21_contig00010867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010867
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                61   1e-07
ref|XP_002284630.1| PREDICTED: uncharacterized protein LOC100257...    60   2e-07
emb|CBI18959.3| unnamed protein product [Vitis vinifera]               57   3e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
 Frame = -2

Query: 544 DDDLQYLGE-----RSRPENP*FRKDVEDILGRPYDEKEYETIWLHVNIRKAMQGYRE-L 383
           DDDL+ L +     + + E   FRK V D+L +PY+ KEY+ +W +VN +K ++   E  
Sbjct: 285 DDDLEILYDSNDMLKKKCEPSEFRKKVTDLLKKPYNPKEYKELWTYVNDQKPVERNMESR 344

Query: 382 RGHLKSYSKDAMGKSYLDEY 323
           RG +KSY    MGKSYL+ Y
Sbjct: 345 RGGVKSYKTKKMGKSYLEYY 364


>ref|XP_002284630.1| PREDICTED: uncharacterized protein LOC100257388 [Vitis vinifera]
          Length = 384

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = -2

Query: 538 DLQYLGERSRPENP*FRKDVEDILGRPYDEKEYETIWLHVNIRKAMQGYRELRGHLKSYS 359
           D   +  R+R  +  FR ++  IL +PYD+ EYE +   +  RK ++ +R+LRG +KSYS
Sbjct: 298 DSSRIKNRNRTGHSQFRDNLMVILKKPYDQLEYEELLQEIIQRKPLERHRDLRGRIKSYS 357

Query: 358 KDAMGKSYLDEYLGMLN 308
            +   KSYLD + G L+
Sbjct: 358 VEICSKSYLDHHTGKLD 374


>emb|CBI18959.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = -2

Query: 538 DLQYLGERSRPENP*FRKDVEDILGRPYDEKEYETIWLHVNIRKAMQGYRELRGHLKSYS 359
           D   +  R+R  +  FR ++  IL +PYD+ EYE +   +  RK ++ +R+LRG +KSYS
Sbjct: 111 DSSRIKNRNRTGHSQFRDNLMVILKKPYDQLEYEELLQEIIQRKPLERHRDLRGRIKSYS 170

Query: 358 KDAMGKSYLDEY 323
            +   KSYLD +
Sbjct: 171 VEICSKSYLDHH 182


Top