BLASTX nr result

ID: Cnidium21_contig00010835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010835
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32381.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [...   122   2e-26
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric...   121   5e-26
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha...   121   7e-26

>emb|CBI32381.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/88 (71%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   KGSGFVAFSSPEEASRALSEMNGKMVFNKPLYVALAQRKDDRRARLQAQFSQMRPIAMVP 182
           +GSGFVAFSSPEEASRAL+EMN KMV +KPLYVALAQRK+DRRARLQAQFSQMRP+ M P
Sbjct: 491 RGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMRPVPMPP 550

Query: 183 PVXXXXXXXXXXXXXXXQQMFYGQAPPA 266
            V               QQMFYGQAPPA
Sbjct: 551 SVVPRLPMYPPSGPGLGQQMFYGQAPPA 578


>ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147839912|emb|CAN65906.1| hypothetical protein
           VITISV_004873 [Vitis vinifera]
          Length = 648

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/88 (71%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   KGSGFVAFSSPEEASRALSEMNGKMVFNKPLYVALAQRKDDRRARLQAQFSQMRPIAMVP 182
           +GSGFVAFSSPEEASRAL+EMN KMV +KPLYVALAQRK+DRRARLQAQFSQMRP+ M P
Sbjct: 352 RGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMRPVPMPP 411

Query: 183 PVXXXXXXXXXXXXXXXQQMFYGQAPPA 266
            V               QQMFYGQAPPA
Sbjct: 412 SVVPRLPMYPPSGPGLGQQMFYGQAPPA 439


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/88 (70%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   KGSGFVAFSSPEEASRALSEMNGKMVFNKPLYVALAQRKDDRRARLQAQFSQMRPIAMVP 182
           +GSGFVAFS+PEEASRAL EMNGK+V +KPLYVALAQRK+DRRARLQAQFSQMRP+AM P
Sbjct: 347 RGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAP 406

Query: 183 PVXXXXXXXXXXXXXXXQQMFYGQAPPA 266
            V               QQ+FYGQAPPA
Sbjct: 407 SVGPRMPMYPPAGPGLGQQIFYGQAPPA 434


>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223542114|gb|EEF43658.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 644

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/88 (69%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   KGSGFVAFSSPEEASRALSEMNGKMVFNKPLYVALAQRKDDRRARLQAQFSQMRPIAMVP 182
           +GSGFVAFS+PEEAS+AL EMNGKMV +KPLYVALAQRK+DRRARLQAQFSQ+RP+AM P
Sbjct: 346 RGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAP 405

Query: 183 PVXXXXXXXXXXXXXXXQQMFYGQAPPA 266
            V               QQ+FYGQAPPA
Sbjct: 406 SVAPRMPMYPPGGPGLGQQIFYGQAPPA 433


>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
          Length = 643

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/88 (71%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   KGSGFVAFSSPEEASRALSEMNGKMVFNKPLYVALAQRKDDRRARLQAQFSQMRPIAMVP 182
           KGSGFVAFS+PEEASRALSEMNGKMV +KPLYVALAQRK++RRARLQAQFSQMRPIAM  
Sbjct: 349 KGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMAS 408

Query: 183 PVXXXXXXXXXXXXXXXQQMFYGQAPPA 266
            V               QQ+FYGQ PPA
Sbjct: 409 SVAPRMPMYPPGGPGLGQQIFYGQPPPA 436


Top