BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010817
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX49609.1| RPGR [Sus scrofa]                                       57   2e-06

>gb|AAX49609.1| RPGR [Sus scrofa]
          Length = 578

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
 Frame = +2

Query: 2   GEKSDFGGVKNDGVGEKNDFEGGMKDQGAEDEVNEAKGEESEVEG--GNGDEFKGVKEGG 175
           GE+ +  G + +G GE  + EGG ++   E +  E   EE + EG  G G E +G  EG 
Sbjct: 255 GERQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQ 314

Query: 176 FXXXXXXXXXXXXXXXXXXXXXXXXXXDEWVTGEREDVNGYGDGWDEQWNDGAGKNEANE 355
                                      DE   GE E+  G G+G +E+  +  G  E  E
Sbjct: 315 EGEGGEEEENGEGQEGEGEEEEEEGERDEGQEGEEEEEEGDGEGQEEEGEEEEGGEEGQE 374

Query: 356 GQRYYDDYENGGYRKEQYDG 415
           G+   ++ + GG  +E+ +G
Sbjct: 375 GEGEEEEGDGGGEEEEEQEG 394