BLASTX nr result

ID: Cnidium21_contig00010807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010807
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...    62   2e-07
ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Popu...    61   3e-07
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...    61   3e-07

>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
           gi|223543945|gb|EEF45471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3502

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
 Frame = +1

Query: 25  QGVSLPAAHDASNNRGTWNQAKTGTPFEKSQVPRFAFNXXXXXXXAETLLHQ------SA 186
           QGVSLP+AH+  ++R  WNQ KTG P E+SQVPRF+ N       AE  L Q       A
Sbjct: 254 QGVSLPSAHENLSSRTAWNQNKTGLPLERSQVPRFSSNSLSGNMMAEVPLQQPTTSSLGA 313

Query: 187 GATVAGHG--------MAMGTPGLPGSVQFSNT 261
           G     HG         +MG  G  G V F ++
Sbjct: 314 GPISKVHGGMPIISSSYSMGELGFSGQVPFGSS 346


>ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Populus trichocarpa]
           gi|222851626|gb|EEE89173.1| hypothetical protein
           POPTRDRAFT_766749 [Populus trichocarpa]
          Length = 539

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
 Frame = +1

Query: 25  QGVSLPAAHDASNNRGTWNQAKTGTPFEKSQVPRFAFNXXXXXXXAETLLHQSAGATVAG 204
           QG SLP+AH++  +RG WNQ K G P E+S +PRF+ N       AE  L QSA +++  
Sbjct: 64  QGGSLPSAHESLTSRGMWNQNKAGLPLERSHIPRFSSNAVSGNTTAEIQLQQSAISSLGS 123

Query: 205 HGMA---------------MGTPGLPGSVQFSNT 261
              +               MG  G  G VQ+S++
Sbjct: 124 SAFSKVHGGMPVTSNPTGPMGELGFAGPVQYSSS 157


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851625|gb|EEE89172.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 3427

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
 Frame = +1

Query: 25  QGVSLPAAHDASNNRGTWNQAKTGTPFEKSQVPRFAFNXXXXXXXAETLLHQSAGATVAG 204
           QG SLP+AH++  +RG WNQ K G P E+S +PRF+ N       AE  L QSA +++  
Sbjct: 201 QGGSLPSAHESLTSRGMWNQNKAGLPLERSHIPRFSSNAVSGNTTAEIQLQQSAISSLGS 260

Query: 205 HGMA---------------MGTPGLPGSVQFSNT 261
              +               MG  G  G VQ+S++
Sbjct: 261 SAFSKVHGGMPVTSNPTGPMGELGFAGPVQYSSS 294


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