BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010798
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V...   400   e-109
ref|XP_003538176.1| PREDICTED: exosome complex component MTR3-li...   392   e-107
gb|AFK37792.1| unknown [Lotus japonicus]                              384   e-104
ref|XP_003539769.1| PREDICTED: exosome complex component MTR3-li...   383   e-104
ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago t...   382   e-104

>ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera]
           gi|147834996|emb|CAN61380.1| hypothetical protein
           VITISV_037546 [Vitis vinifera]
           gi|297746275|emb|CBI16331.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  400 bits (1028), Expect = e-109
 Identities = 194/256 (75%), Positives = 226/256 (88%)
 Frame = +1

Query: 100 MAGKDSATPSTYSPSPKIQNKKRAPVFTDVDWVRPDGRGFHQCRPAYLRTGAVNSASGSA 279
           MAGK +ATPSTYSPSP  + K+  P+F DVDWVRPDGRGFHQCRPA+L+TGAVN+ASGSA
Sbjct: 1   MAGKSAATPSTYSPSPAPKTKR--PIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSA 58

Query: 280 YIEIGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPTRGQVSDCKEISARLHK 459
           Y E GNTKVIVSVFGPRESKKAM YS  GRLNCNVSYTTFA P RGQ SD K  S+ LHK
Sbjct: 59  YAEFGNTKVIVSVFGPRESKKAMAYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHK 118

Query: 460 ALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLISSVSASCL 639
           ALEGAII+++FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIM+YDL++SVS SCL
Sbjct: 119 ALEGAIIVESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCL 178

Query: 640 GKNIVIDPVSEEESYQEGGLMITSMASRKEITQLAISGEWSTPNLHEAMELCLMACSKLG 819
           GKN+VIDP+ EEESYQ+G L+IT M SR E+TQL ++GEWSTP +HEAM++CL ACSKL 
Sbjct: 179 GKNLVIDPILEEESYQDGSLLITCMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSKLA 238

Query: 820 EVMRACLKESSSASQE 867
           +++R+CLKE++SA ++
Sbjct: 239 KIIRSCLKETASAPKD 254


>ref|XP_003538176.1| PREDICTED: exosome complex component MTR3-like [Glycine max]
          Length = 255

 Score =  392 bits (1007), Expect = e-107
 Identities = 194/256 (75%), Positives = 219/256 (85%)
 Frame = +1

Query: 100 MAGKDSATPSTYSPSPKIQNKKRAPVFTDVDWVRPDGRGFHQCRPAYLRTGAVNSASGSA 279
           MAGK  ATP+TYSPSP    KK+ P+F + DWVRPDGRGFHQCRPA+ RTGAVN+ASGSA
Sbjct: 1   MAGKGGATPATYSPSPTTNRKKKPPIFKE-DWVRPDGRGFHQCRPAFFRTGAVNAASGSA 59

Query: 280 YIEIGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPTRGQVSDCKEISARLHK 459
           Y E GNTKVIVSVFGPRESKKAMMYSDIGRLNCNVS+TTFATP RGQ SD KE  A LHK
Sbjct: 60  YAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYCAMLHK 119

Query: 460 ALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLISSVSASCL 639
           ALEGAIIL+TFPKTTVDVFALVLES GSDLPVVISCASLALADAGIM+YD+++SVS SC 
Sbjct: 120 ALEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDIVASVSVSCF 179

Query: 640 GKNIVIDPVSEEESYQEGGLMITSMASRKEITQLAISGEWSTPNLHEAMELCLMACSKLG 819
            KN+VIDP+ EEE  Q+G LMIT M SR EITQL ++GEWST  ++E M+LCL AC+KL 
Sbjct: 180 NKNLVIDPILEEEIGQDGSLMITCMPSRYEITQLTVTGEWSTTKINEGMQLCLDACAKLA 239

Query: 820 EVMRACLKESSSASQE 867
           ++MR+CLKE +S SQE
Sbjct: 240 KIMRSCLKEVASDSQE 255


>gb|AFK37792.1| unknown [Lotus japonicus]
          Length = 253

 Score =  384 bits (987), Expect = e-104
 Identities = 190/253 (75%), Positives = 218/253 (86%)
 Frame = +1

Query: 100 MAGKDSATPSTYSPSPKIQNKKRAPVFTDVDWVRPDGRGFHQCRPAYLRTGAVNSASGSA 279
           MAGK  ATP+TYSPSP    KK + +    DWVRPDGRGFHQCRPA+ RTGAVN+ASGSA
Sbjct: 1   MAGKAGATPATYSPSPTTDKKKTSLI--KEDWVRPDGRGFHQCRPAFFRTGAVNAASGSA 58

Query: 280 YIEIGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPTRGQVSDCKEISARLHK 459
           Y E GNTKVIVSVFGPRESKKAM+YSD+GRLNCNVSYTTFATP RGQ SD K+ SA L K
Sbjct: 59  YAEFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFATPVRGQGSDHKDYSAMLDK 118

Query: 460 ALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLISSVSASCL 639
           AL GAIIL++FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIM+YDL++SVS SCL
Sbjct: 119 ALGGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCL 178

Query: 640 GKNIVIDPVSEEESYQEGGLMITSMASRKEITQLAISGEWSTPNLHEAMELCLMACSKLG 819
            KN+VIDP+SEEE+ Q+G +MIT M SR EITQL ++GEWSTP ++E M+LCL AC+KL 
Sbjct: 179 SKNLVIDPISEEENCQDGSIMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLA 238

Query: 820 EVMRACLKESSSA 858
           +VMR+CLKE+S +
Sbjct: 239 KVMRSCLKEASDS 251


>ref|XP_003539769.1| PREDICTED: exosome complex component MTR3-like [Glycine max]
          Length = 254

 Score =  383 bits (983), Expect = e-104
 Identities = 192/256 (75%), Positives = 217/256 (84%)
 Frame = +1

Query: 100 MAGKDSATPSTYSPSPKIQNKKRAPVFTDVDWVRPDGRGFHQCRPAYLRTGAVNSASGSA 279
           MAGK  +TP+TYSPSP    KK  P   + D  RPDGR FHQCRPA+ RTGAVN+ASGSA
Sbjct: 1   MAGKGGSTPATYSPSPTTDKKK--PSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSA 58

Query: 280 YIEIGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPTRGQVSDCKEISARLHK 459
           Y E+GNTKVIVSVFGPRESKKAMMYSDIGRLNCNVS+TTFATP RGQ SD KE S+ LHK
Sbjct: 59  YAEVGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYSSMLHK 118

Query: 460 ALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLISSVSASCL 639
           ALEGAIIL+TFPKTTVDVFALVLES GSDLPVVISCASLALADAGIM+YDL++SVS SC 
Sbjct: 119 ALEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCF 178

Query: 640 GKNIVIDPVSEEESYQEGGLMITSMASRKEITQLAISGEWSTPNLHEAMELCLMACSKLG 819
            KN+VIDPV EEE+ Q+G LMIT M SR EITQL ++GEWSTP ++E M+LCL AC+KL 
Sbjct: 179 NKNLVIDPVLEEENGQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLA 238

Query: 820 EVMRACLKESSSASQE 867
           ++MR+CLKE+ S SQE
Sbjct: 239 KIMRSCLKEAVSDSQE 254


>ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago truncatula]
           gi|355507420|gb|AES88562.1| Exosome complex exonuclease
           MTR3 [Medicago truncatula]
          Length = 258

 Score =  382 bits (981), Expect = e-104
 Identities = 189/256 (73%), Positives = 218/256 (85%)
 Frame = +1

Query: 100 MAGKDSATPSTYSPSPKIQNKKRAPVFTDVDWVRPDGRGFHQCRPAYLRTGAVNSASGSA 279
           MAGK   TP+TYSPS     KK+  +  + DW RPDGRGFHQCRPA+ RTGAVN+ASGSA
Sbjct: 1   MAGKSGTTPATYSPS-LTTGKKKPLLLKEEDWTRPDGRGFHQCRPAFFRTGAVNAASGSA 59

Query: 280 YIEIGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPTRGQVSDCKEISARLHK 459
           Y E GNTKVIVSVFGPRESKKAMMYSD GRLNCNVSYTTF+TP RGQ SD KE S+ LHK
Sbjct: 60  YAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLHK 119

Query: 460 ALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLISSVSASCL 639
           ALEGAIILD+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI++YDL++SVS SCL
Sbjct: 120 ALEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCL 179

Query: 640 GKNIVIDPVSEEESYQEGGLMITSMASRKEITQLAISGEWSTPNLHEAMELCLMACSKLG 819
           GKN+VIDP+ EEE+ Q+G LMIT M SR EITQL ++GEWSTP ++E M+LCL AC+KL 
Sbjct: 180 GKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLA 239

Query: 820 EVMRACLKESSSASQE 867
           ++MR+CLKES+S +Q+
Sbjct: 240 KIMRSCLKESASDAQD 255