BLASTX nr result

ID: Cnidium21_contig00010756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010756
         (1696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   469   e-130
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   458   e-126
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   454   e-125
ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   444   e-122
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   444   e-122

>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
            sativus]
          Length = 404

 Score =  469 bits (1208), Expect = e-130
 Identities = 235/332 (70%), Positives = 263/332 (79%)
 Frame = -1

Query: 1525 SASGDEIRTLWIGDLQYFMDENYLLGCFSQSGEVVSAKVIRNKSSGQPEGYGFIEFVSRA 1346
            SA+GDE+RTLWIGDLQY+MDENY+  CF+ +GEV S KVIRNK +GQ EGYGFIEF++R 
Sbjct: 59   SANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRP 118

Query: 1345 AAERSLQTYNGTPMPTVQQNFRLNWASFGVGEKRPDDMIDYTIFVGDLAADVSDYTLQET 1166
            AAER LQTYNGT MP   QNFRLNWAS   GEKR DD  DYTIFVGDLA DV+DY LQET
Sbjct: 119  AAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 176

Query: 1165 FRAYYPSVRGAKVVIDKETSRSKGYGFVKFGDESEQLRAMTEMNGIMCSSRPMRIGPAAN 986
            FRA Y SV+GAKVVID+ T R+KGYGFVKFGDESEQ+RAMTEMNG+ CSSRPMRIGPAAN
Sbjct: 177  FRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAAN 236

Query: 985  KKSTGIQQPTKATYQNTQGAQSEDDPNNTTIFVGGLDPSVSEEHLRQVFGTYGQLDHVKI 806
            K ++G QQ +K +YQN QGAQ+E+DPNNTTIFVG LD +V++EHLRQVFG YG+L HVKI
Sbjct: 237  KNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKI 296

Query: 805  PVGKRCGFVQFXXXXXXXXALSRLNGTQLGGQNIRLSWGRTPSNKQPQVDPNQWNXXXXX 626
            PVGKRCGFVQF        AL  LNGTQ+GGQNIRLSWGR+PSNKQPQ DPNQWN     
Sbjct: 297  PVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN--GGG 354

Query: 625  XXXXXXXXXXXXYAPPSQGPNLSYGGYPGYGN 530
                        YAP  Q PN+ Y GY GYGN
Sbjct: 355  YYGYGQGYENYSYAPAPQDPNMFYSGYGGYGN 386


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis sativus]
            gi|449472157|ref|XP_004153511.1| PREDICTED:
            polyadenylate-binding protein RBP45-like [Cucumis
            sativus]
          Length = 408

 Score =  458 bits (1179), Expect = e-126
 Identities = 229/334 (68%), Positives = 258/334 (77%), Gaps = 3/334 (0%)
 Frame = -1

Query: 1522 ASGDEIRTLWIGDLQYFMDENYLLGCFSQSGEVVSAKVIRNKSSGQPEGYGFIEFVSRAA 1343
            A+GDE+RTLWIGDLQY+MDENY+  CF+ +GEV S KVIRNK +GQ EGYGFIEF++R A
Sbjct: 60   ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 119

Query: 1342 AERSLQTYNGTPMPTVQQNFRLNWASFGVGEKRPDDMIDYTIFVGDLAADVSDYTLQETF 1163
            AER LQTYNGT MP   QNFRLNWAS   GEKR DD  DYTIFVGDLA DV+DY LQETF
Sbjct: 120  AERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETF 177

Query: 1162 RAYYPSVRGAKVVIDKETSRSKGYGFVKFGDESEQLRAMTEMNGIMCSSRPMRIGPAANK 983
            RA Y SV+GAKVVID+ T R+KGYGFVKFGDESEQ+RAMTEMNG+ CSSRPMRIGPAANK
Sbjct: 178  RARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANK 237

Query: 982  KSTGIQQPTKATYQNTQGAQSEDDPNNTTIFVGGLDPSVSEEHLRQVFGTYGQLDHVKIP 803
             ++G QQ +K +YQN  G Q+E+DPNNTTIFVG LD +V++EHLRQVF  YG+L HVKIP
Sbjct: 238  NTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIP 297

Query: 802  VGKRCGFVQFXXXXXXXXALSRLNGTQLGGQNIRLSWGRTPSNKQPQVDPNQWN---XXX 632
             GKRCGFVQF        AL  LNGT +GGQNIRLSWGR+PSNKQPQ DPNQWN      
Sbjct: 298  AGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGG 357

Query: 631  XXXXXXXXXXXXXXYAPPSQGPNLSYGGYPGYGN 530
                          YAP +Q PN+ Y GY GYGN
Sbjct: 358  GGYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGN 391


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  454 bits (1169), Expect = e-125
 Identities = 226/332 (68%), Positives = 259/332 (78%)
 Frame = -1

Query: 1525 SASGDEIRTLWIGDLQYFMDENYLLGCFSQSGEVVSAKVIRNKSSGQPEGYGFIEFVSRA 1346
            +++ +EIR+LWIGDLQ +M+ENYL GCFSQ+GEVVS KVIRNK +GQ EGYGFIE  +RA
Sbjct: 83   ASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRA 142

Query: 1345 AAERSLQTYNGTPMPTVQQNFRLNWASFGVGEKRPDDMIDYTIFVGDLAADVSDYTLQET 1166
            AAER LQTYNGT MP  +QNFRLNWA+ G GE+R DD  DYTIFVGDLA+DV+DY LQET
Sbjct: 143  AAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQET 202

Query: 1165 FRAYYPSVRGAKVVIDKETSRSKGYGFVKFGDESEQLRAMTEMNGIMCSSRPMRIGPAAN 986
            FR +YPSV+GAKVV D+ T RSKGYGFV+FGDE EQLRAM EMNG+ CS+RPMRIGPAA 
Sbjct: 203  FRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAAT 262

Query: 985  KKSTGIQQPTKATYQNTQGAQSEDDPNNTTIFVGGLDPSVSEEHLRQVFGTYGQLDHVKI 806
            KK  G QQ  KA++QNTQG Q E DPNNTTIFVGGLD +V++++LRQVF  YG+L HVKI
Sbjct: 263  KKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI 322

Query: 805  PVGKRCGFVQFXXXXXXXXALSRLNGTQLGGQNIRLSWGRTPSNKQPQVDPNQWNXXXXX 626
            PVGKRCGFVQF        AL+ LNGTQLG Q+IRLSWGR+PSNKQ Q D  QWN     
Sbjct: 323  PVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWN---GG 379

Query: 625  XXXXXXXXXXXXYAPPSQGPNLSYGGYPGYGN 530
                        YAPP Q PN+ YG YPGYGN
Sbjct: 380  YYGYAQGYEAYGYAPPPQDPNMYYGAYPGYGN 411


>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 402

 Score =  444 bits (1143), Expect = e-122
 Identities = 223/332 (67%), Positives = 254/332 (76%), Gaps = 2/332 (0%)
 Frame = -1

Query: 1519 SGDEIRTLWIGDLQYFMDENYLLGCFSQSGEVVSAKVIRNKSSGQPEGYGFIEFVSRAAA 1340
            S DE+RTLWIGDLQY+MDENYL  CF+ +GE+ S KVIRNK + Q EGYGFIEF SRA A
Sbjct: 60   SADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTSRAGA 119

Query: 1339 ERSLQTYNGTPMPTVQQNFRLNWASFGVGEKRPDDMIDYTIFVGDLAADVSDYTLQETFR 1160
            ER LQTYNGT MP   QNFRLNWA+F  GE+R DD  D+TIFVGDLAADV+DY LQETFR
Sbjct: 120  ERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFR 179

Query: 1159 AYYPSVRGAKVVIDKETSRSKGYGFVKFGDESEQLRAMTEMNGIMCSSRPMRIGPAANKK 980
            A YPS +GAKVVID+ T R+KGYGFV+FGDESEQ+RAM+EM G++CS+RPMRIGPA+NK 
Sbjct: 180  ARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGPASNKN 239

Query: 979  STGIQQPTKATYQNTQGAQSEDDPNNTTIFVGGLDPSVSEEHLRQVFGTYGQLDHVKIPV 800
             +   QP KA+YQN QGAQ+E DPNNTTIFVG LDP+V+++HLRQVFG YG+L HVKIP 
Sbjct: 240  PSTQSQP-KASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPA 298

Query: 799  GKRCGFVQFXXXXXXXXALSRLNGTQLGGQNIRLSWGRTPSNKQPQVDPNQWN--XXXXX 626
            GKRCGFVQF        AL  LNGT LGGQN+RLSWGR+PSNKQ Q D NQWN       
Sbjct: 299  GKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSGGGGY 358

Query: 625  XXXXXXXXXXXXYAPPSQGPNLSYGGYPGYGN 530
                        YAP  Q PN+ YG YPGY N
Sbjct: 359  YGYAQGGYENYGYAPAGQDPNM-YGSYPGYAN 389


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  444 bits (1142), Expect = e-122
 Identities = 222/332 (66%), Positives = 255/332 (76%)
 Frame = -1

Query: 1525 SASGDEIRTLWIGDLQYFMDENYLLGCFSQSGEVVSAKVIRNKSSGQPEGYGFIEFVSRA 1346
            +++ +EIR+LWIGDLQ +M+ENY  GCFSQ+GEVVS KVIRNK +GQ EGYGFIE  +RA
Sbjct: 68   ASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRA 127

Query: 1345 AAERSLQTYNGTPMPTVQQNFRLNWASFGVGEKRPDDMIDYTIFVGDLAADVSDYTLQET 1166
            AAER LQTYNGT MP  +QNFRLNWA+ G GE+R DD  DYTIFVGDLA+DV+DY LQET
Sbjct: 128  AAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQET 187

Query: 1165 FRAYYPSVRGAKVVIDKETSRSKGYGFVKFGDESEQLRAMTEMNGIMCSSRPMRIGPAAN 986
            FR +YPSV+GAKVV D+ T RSKGYGFV+FGDE EQLRAM EMNG+ CS+RPMRIGPAA 
Sbjct: 188  FRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAAT 247

Query: 985  KKSTGIQQPTKATYQNTQGAQSEDDPNNTTIFVGGLDPSVSEEHLRQVFGTYGQLDHVKI 806
            KK      P  A++QNTQG Q E DPNNTTIFVGGLD +V++++LRQVF  YG+L HVKI
Sbjct: 248  KK------PVGASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI 301

Query: 805  PVGKRCGFVQFXXXXXXXXALSRLNGTQLGGQNIRLSWGRTPSNKQPQVDPNQWNXXXXX 626
            PVGKRCGFVQF        AL+ LNGTQLG Q+IRLSWGR+PSNKQ Q D  QWN     
Sbjct: 302  PVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWN---GG 358

Query: 625  XXXXXXXXXXXXYAPPSQGPNLSYGGYPGYGN 530
                        YAPP Q PN+ YG YPGYGN
Sbjct: 359  YYGYAQGYEAYGYAPPPQDPNMYYGAYPGYGN 390


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