BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010701
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   275   8e-72
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   275   8e-72
emb|CBI38762.3| unnamed protein product [Vitis vinifera]              275   8e-72
ref|XP_002511805.1| cleavage and polyadenylation specificity fac...   274   2e-71
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   263   3e-68

>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 365

 Score =  275 bits (704), Expect = 8e-72
 Identities = 128/188 (68%), Positives = 143/188 (76%)
 Frame = -1

Query: 906 ANTMFSFIWWIVGFYWISIGGQNLTHDSPQLYWLCITFLAFDVFFXXXXXXXXXXXXXXX 727
           ANTMFSFIWWI+GFYW+S GGQ+LT DSPQLYWLCI FLAFDVFF               
Sbjct: 176 ANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAV 235

Query: 726 XXXXXCIIAILYAVADQEGASKDDIERLPTYKFQRIGDFEKQNGEVQEAFSGTMTECNTD 547
                CIIAILY VADQEGA+K++IERLP YKF+RIG+ EK NGE+QE+F G MTEC+TD
Sbjct: 236 CCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTD 295

Query: 546 MPTERVLSVEDAECSICLCAYEDGTELRELPCHHHFHSACIDKWLYINATCPLCKFNIVK 367
            P E V+  EDAEC ICL AYED TELRELPC H FH  CIDKWLYINATCPLCK NI+K
Sbjct: 296 TPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILK 355

Query: 366 NGNHSGSD 343
           N + SG +
Sbjct: 356 NASQSGCE 363


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
           [Vitis vinifera]
          Length = 382

 Score =  275 bits (704), Expect = 8e-72
 Identities = 128/188 (68%), Positives = 143/188 (76%)
 Frame = -1

Query: 906 ANTMFSFIWWIVGFYWISIGGQNLTHDSPQLYWLCITFLAFDVFFXXXXXXXXXXXXXXX 727
           ANTMFSFIWWI+GFYW+S GGQ+LT DSPQLYWLCI FLAFDVFF               
Sbjct: 193 ANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAV 252

Query: 726 XXXXXCIIAILYAVADQEGASKDDIERLPTYKFQRIGDFEKQNGEVQEAFSGTMTECNTD 547
                CIIAILY VADQEGA+K++IERLP YKF+RIG+ EK NGE+QE+F G MTEC+TD
Sbjct: 253 CCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTD 312

Query: 546 MPTERVLSVEDAECSICLCAYEDGTELRELPCHHHFHSACIDKWLYINATCPLCKFNIVK 367
            P E V+  EDAEC ICL AYED TELRELPC H FH  CIDKWLYINATCPLCK NI+K
Sbjct: 313 TPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILK 372

Query: 366 NGNHSGSD 343
           N + SG +
Sbjct: 373 NASQSGCE 380


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  275 bits (704), Expect = 8e-72
 Identities = 128/188 (68%), Positives = 143/188 (76%)
 Frame = -1

Query: 906 ANTMFSFIWWIVGFYWISIGGQNLTHDSPQLYWLCITFLAFDVFFXXXXXXXXXXXXXXX 727
           ANTMFSFIWWI+GFYW+S GGQ+LT DSPQLYWLCI FLAFDVFF               
Sbjct: 140 ANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAV 199

Query: 726 XXXXXCIIAILYAVADQEGASKDDIERLPTYKFQRIGDFEKQNGEVQEAFSGTMTECNTD 547
                CIIAILY VADQEGA+K++IERLP YKF+RIG+ EK NGE+QE+F G MTEC+TD
Sbjct: 200 CCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTD 259

Query: 546 MPTERVLSVEDAECSICLCAYEDGTELRELPCHHHFHSACIDKWLYINATCPLCKFNIVK 367
            P E V+  EDAEC ICL AYED TELRELPC H FH  CIDKWLYINATCPLCK NI+K
Sbjct: 260 TPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILK 319

Query: 366 NGNHSGSD 343
           N + SG +
Sbjct: 320 NASQSGCE 327


>ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223548985|gb|EEF50474.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 375

 Score =  274 bits (701), Expect = 2e-71
 Identities = 128/190 (67%), Positives = 142/190 (74%)
 Frame = -1

Query: 906 ANTMFSFIWWIVGFYWISIGGQNLTHDSPQLYWLCITFLAFDVFFXXXXXXXXXXXXXXX 727
           ANTMFSFIWWIVGFYW++ GGQNLT+DSPQLYWLCITFLAFDV F               
Sbjct: 186 ANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVACLIGLAI 245

Query: 726 XXXXXCIIAILYAVADQEGASKDDIERLPTYKFQRIGDFEKQNGEVQEAFSGTMTECNTD 547
                CII ILYA+ D+EGA++++IE+LP YKF+RIGDFEK N + Q  F G MTEC  D
Sbjct: 246 CCCLPCIIGILYAMTDREGATQEEIEQLPMYKFRRIGDFEKVNADFQATFGGMMTECEID 305

Query: 546 MPTERVLSVEDAECSICLCAYEDGTELRELPCHHHFHSACIDKWLYINATCPLCKFNIVK 367
            PTER LS EDAEC ICL AYEDGTELR+LPC HHFHS CIDKWLYINATCPLCK NI+K
Sbjct: 306 TPTERRLSHEDAECCICLSAYEDGTELRQLPCQHHFHSTCIDKWLYINATCPLCKLNILK 365

Query: 366 NGNHSGSDEV 337
             NH    EV
Sbjct: 366 ASNHIAGGEV 375


>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
           [Vitis vinifera]
          Length = 392

 Score =  263 bits (673), Expect = 3e-68
 Identities = 123/190 (64%), Positives = 143/190 (75%)
 Frame = -1

Query: 906 ANTMFSFIWWIVGFYWISIGGQNLTHDSPQLYWLCITFLAFDVFFXXXXXXXXXXXXXXX 727
           ANTMFSFIWWI+GFYW+S GGQ L  DSPQLYWLCI FL FDVFF               
Sbjct: 204 ANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAV 263

Query: 726 XXXXXCIIAILYAVADQEGASKDDIERLPTYKFQRIGDFEKQNGEVQEAFSGTMTECNTD 547
                CIIAILYAVADQEGASK+DI++L  +KF+++GD EK +G++Q A  G MTEC TD
Sbjct: 264 CCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTD 323

Query: 546 MPTERVLSVEDAECSICLCAYEDGTELRELPCHHHFHSACIDKWLYINATCPLCKFNIVK 367
            PTE VLS EDAEC ICL AY+DG ELRELPC HHFH  C+DKWLYINATCPLCK+NI+K
Sbjct: 324 APTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILK 383

Query: 366 NGNHSGSDEV 337
           + + +G +EV
Sbjct: 384 SSS-NGREEV 392