BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010680
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144885.1| PREDICTED: ubiquilin-2-like isoform 2 [Cucum...   143   1e-37
ref|XP_002886102.1| ubiquitin family protein [Arabidopsis lyrata...   143   3e-37
ref|NP_565407.1| ubiquilin [Arabidopsis thaliana] gi|13430494|gb...   144   4e-37
ref|XP_001759037.1| predicted protein [Physcomitrella patens sub...   125   3e-26
gb|ABX75362.1| hypothetical protein LBL8 [Panax quinquefolius]         92   7e-25

>ref|XP_004144885.1| PREDICTED: ubiquilin-2-like isoform 2 [Cucumis sativus]
            gi|449473220|ref|XP_004153821.1| PREDICTED:
            ubiquilin-2-like isoform 2 [Cucumis sativus]
          Length = 546

 Score =  143 bits (361), Expect(2) = 1e-37
 Identities = 119/377 (31%), Positives = 169/377 (44%), Gaps = 92/377 (24%)
 Frame = -2

Query: 1173 GVQDGHVIHLARRFVPATSCTSASVAAPPPVGGNITFDVLTGAGSVHSQGFESEA--SSL 1000
            G+Q  H IH+ R F  A+S  SA  +       +    V  G GS  S  F +    +SL
Sbjct: 82   GLQADHTIHMVRGFAQASSTPSAPASNVNTRSSDTAPGVTRGVGSNESGAFGNGGLGASL 141

Query: 999  F-----------GYGLPDFEQVEQQMLGNPNMISEMMNIPATRNLLINDPHIVYITVTNN 853
            F           G GLP+FEQV+QQ+  NPNM+ E+MN+PA +NL+ N+P ++   + +N
Sbjct: 142  FPGLGFNPLGGGGAGLPEFEQVQQQLTQNPNMMREIMNMPAIQNLM-NNPDLMRTLIMSN 200

Query: 852  MWIHESIDHEPEFVYILNNPGI------------------------MSNNESLPEGYEGS 745
              + + ID  PE  +ILN+PGI                        MSN ES PEG+   
Sbjct: 201  PQMRDIIDRNPELAHILNDPGILRQTLEAARNPELMREMMRNTDRAMSNIESSPEGF--- 257

Query: 744  NMLRQRYENVHEPLLNA-----------QHDPWGSNAATRGFL-----SNN------TLR 631
            NMLR+ YENV EP LNA             +P+ +  A +G       SNN      T  
Sbjct: 258  NMLRRMYENVQEPFLNATTMAGNAGNDSSSNPFAALLANQGGAQARNESNNSTTGSETTG 317

Query: 630  NRAAGSN-----------------------VPGFAGLGIPGLSGLDAQSRSFIDPAMRIQ 520
            N A  +N                        PG  GLG  G + +D  + +  DPA   Q
Sbjct: 318  NAAPNTNPLPNPWGGTQTTTTQPTPAGDTRAPGIGGLGGAGRTNMDRFAGAVPDPAQLNQ 377

Query: 519  ALQHPATFQITDEVIHN----------DPQSSSLVDFNPQVLDALQNPGMSMSQLASRRR 370
             LQ+PA  Q+   ++ N          +PQ  S+VD NPQ+ + +QNP   + QL +   
Sbjct: 378  FLQNPAISQMMQSLLSNPQYMNQILNLNPQLRSMVDMNPQLREMMQNPEF-VRQLTNPEM 436

Query: 369  FQQSRAFLSSPIGSMPR 319
             QQ  +   S + ++ R
Sbjct: 437  MQQMLSIQQSLLSTLNR 453



 Score = 40.8 bits (94), Expect(2) = 1e-37
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = -1

Query: 226 MFDGLTARGA-------VRPEEIHGNHLSELQEMGFNDNCANLRALIAT 101
           +F GL A G        V PEE++   LS+LQEMGF D   N+RAL AT
Sbjct: 481 LFGGLGAGGLAAPHNPNVPPEELYATQLSQLQEMGFFDTQENIRALRAT 529


>ref|XP_002886102.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297331942|gb|EFH62361.1| ubiquitin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  143 bits (360), Expect(2) = 3e-37
 Identities = 114/367 (31%), Positives = 161/367 (43%), Gaps = 89/367 (24%)
 Frame = -2

Query: 1173 GVQDGHVIHLARRFVPATSCTSASVA-----APPPVGGNITFDVLTGAGSVHSQGFE--- 1018
            G+Q  H +H+ R FVP++    A+ A     AP  V  N + ++  G       GF    
Sbjct: 77   GLQADHTVHMVRGFVPSSPSAPAANAGNQTTAPQAVSSNDSSNLGGGESLFPGLGFNPLG 136

Query: 1017 --SEASSLFGYGLPDFEQVEQQMLGNPNMISEMMNIPATRNLLINDPHIVYITVTNNMWI 844
              +  + LFG GLPD EQ +QQ+  NPNMI +MMN PA +NL+ N+P  +   + NN  +
Sbjct: 137  GGNAMAGLFGSGLPDLEQAQQQLAQNPNMIRDMMNTPAIQNLM-NNPEFMRSMIMNNPQM 195

Query: 843  HESIDHEPEFVYILNNPGI------------------------MSNNESLPEGYEGSNML 736
             E +D  PE  ++LN+P I                        MSN ES+PEG+   NML
Sbjct: 196  RELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGF---NML 252

Query: 735  RQRYENVHEPLLNA--QHDPWGSNAATRGF---------------LSNNTLRNRA----- 622
            R+ YENV EPL+NA       GSN  +  F               +SNNT    A     
Sbjct: 253  RRMYENVQEPLMNATTMSGNAGSNTGSNPFAALLGNQGVTTQGSDVSNNTSTPNAETGTP 312

Query: 621  -----------------------AGSNVPGFAGLGIPGLSGLDAQSRSFIDPAMRIQALQ 511
                                   AG  + G  GL   G+ G D+   +  D +   Q LQ
Sbjct: 313  NANPLPNPWGATAGQTTAPGWTNAGGGLGGLGGLAGLGMLGADSPLGATPDASQLSQILQ 372

Query: 510  HPATFQITDEVIHN----------DPQSSSLVDFNPQVLDALQNPGMSMSQLASRRRFQQ 361
            +PA  Q+   V+ N          +PQ  S++D NPQ+ + +QNP   + Q +S    QQ
Sbjct: 373  NPAMSQMMQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMMQNPEF-LRQFSSPEMMQQ 431

Query: 360  SRAFLSS 340
              +   S
Sbjct: 432  MMSLQQS 438



 Score = 39.7 bits (91), Expect(2) = 3e-37
 Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = -1

Query: 226 MFDGLTARGA-------VRPEEIHGNHLSELQEMGFNDNCANLRALIAT 101
           MF  L A G        V PEE +   L +LQEMGF D   N+RAL+AT
Sbjct: 472 MFGSLGAGGLSGTNQPNVPPEERYATQLQQLQEMGFYDRAENIRALLAT 520


>ref|NP_565407.1| ubiquilin [Arabidopsis thaliana] gi|13430494|gb|AAK25869.1|AF360159_1
            putative ubiquitin protein [Arabidopsis thaliana]
            gi|14596081|gb|AAK68768.1| putative ubiquitin-like
            protein [Arabidopsis thaliana] gi|20148243|gb|AAM10012.1|
            putative ubiquitin-like protein [Arabidopsis thaliana]
            gi|20198103|gb|AAD25137.2| putative ubiquitin-like
            protein [Arabidopsis thaliana] gi|21280931|gb|AAM44934.1|
            putative ubiquitin protein [Arabidopsis thaliana]
            gi|110735106|gb|ABG89123.1| Dsk2b [synthetic construct]
            gi|110737155|dbj|BAF00527.1| ubiquitin-like protein
            [Arabidopsis thaliana] gi|330251502|gb|AEC06596.1|
            ubiquilin [Arabidopsis thaliana]
          Length = 538

 Score =  144 bits (362), Expect(2) = 4e-37
 Identities = 114/368 (30%), Positives = 162/368 (44%), Gaps = 90/368 (24%)
 Frame = -2

Query: 1173 GVQDGHVIHLARRFVPATSCTSASVA-----APPPVGGNITFDVLTGAGSVHSQGFE--- 1018
            G+Q  H +H+ R FVP++    A+ A     AP  VG N + ++  G       GF    
Sbjct: 77   GLQADHTVHMVRGFVPSSPSAPAANAGNQTTAPQAVGSNDSSNLGGGESLFPGLGFNPLG 136

Query: 1017 --SEASSLFGYGLPDFEQVEQQMLGNPNMISEMMNIPATRNLLINDPHIVYITVTNNMWI 844
              +  + LFG GLPD EQ +QQ+  NPNMI EMMN PA +NL+ N+P  +   + NN  +
Sbjct: 137  GGNAMAGLFGSGLPDLEQAQQQLAQNPNMIREMMNTPAIQNLM-NNPEFMRSMIMNNPQM 195

Query: 843  HESIDHEPEFVYILNNPGI------------------------MSNNESLPEGYEGSNML 736
             E +D  PE  ++LN+P I                        MSN ES+PEG+   NML
Sbjct: 196  RELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGF---NML 252

Query: 735  RQRYENVHEPLLNA--QHDPWGSNAATRGF---------------LSNNTL--------- 634
            R+ YENV EPL+NA    +  G+N ++  F                SNN           
Sbjct: 253  RRMYENVQEPLMNATTMSENAGNNTSSNPFAALLGNQGVTTQGSDTSNNISAPNAETGTP 312

Query: 633  --------------------RNRAAGSNVPGFAGLGIPGLSGLDAQSRSFIDPAMRIQAL 514
                                R  A    + G  GLG  G+ G D+   +  D +   Q L
Sbjct: 313  NANPLPNPWGATAGQTTAPGRTNAGLGGLGGLGGLGGLGMLGADSPLGATPDASQLSQIL 372

Query: 513  QHPATFQITDEVIHN----------DPQSSSLVDFNPQVLDALQNPGMSMSQLASRRRFQ 364
            Q+PA  Q+   V+ N          +PQ  S++D NPQ+ + +QNP   + Q +S    Q
Sbjct: 373  QNPAMSQMMQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMMQNPDF-LRQFSSPEMMQ 431

Query: 363  QSRAFLSS 340
            Q  +   S
Sbjct: 432  QMMSLQQS 439



 Score = 38.5 bits (88), Expect(2) = 4e-37
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = -1

Query: 226 MFDGLTARGA-------VRPEEIHGNHLSELQEMGFNDNCANLRALIAT 101
           MF  L A G        V PEE     L +LQEMGF D   N+RAL+AT
Sbjct: 473 MFGSLGAGGLSGTNQPNVPPEERFATQLQQLQEMGFYDRAENIRALLAT 521


>ref|XP_001759037.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162689736|gb|EDQ76106.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 531

 Score =  125 bits (313), Expect = 3e-26
 Identities = 112/381 (29%), Positives = 162/381 (42%), Gaps = 97/381 (25%)
 Frame = -2

Query: 1173 GVQDGHVIHLARRFVPA--------TSCTSASVAAPPPVGGNITFDVLTGAGSVHSQGFE 1018
            G+Q  H +HL R   PA        TS  + +VA   PVG       + G G +   G  
Sbjct: 76   GLQSDHTVHLVRGAAPAPAAGTPTLTSTPTPAVAQANPVG----LGSVAGLGGMGFPGIG 131

Query: 1017 ----SEASSLFGYGLPDFEQVEQQMLGNPNMISEMMNIPATRNLLINDPHIVYITVTNNM 850
                  A   FG G  DF+QV+QQ++ NPN++ EMMN+P  +NL+ N+P ++   + +N 
Sbjct: 132  LGSGGGAFPPFGTGASDFQQVQQQLMQNPNLMREMMNMPVVQNLM-NNPDLMRSLIMSNP 190

Query: 849  WIHESIDHEPEFVYILNNPG------------------------IMSNNESLPEGYEGSN 742
             + E ID  P+  +ILN+PG                         MSN E+ PEG+   N
Sbjct: 191  QMREIIDRNPDLAHILNDPGTLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGF---N 247

Query: 741  MLRQRYENVHEPLLNA-----------QHDPW----GSNAATRGFLSNNTLRNRAAGSNV 607
            MLR+ YENV EPLLNA             +P+    G N A +G        N  AG+ V
Sbjct: 248  MLRRMYENVQEPLLNAATMSGEVGNGVAPNPFAALVGMNGAAQG-QGQGAANNTGAGTTV 306

Query: 606  P---------------------------GF------AGLGIPGLSGLDAQSRSFIDPAMR 526
            P                           GF      AGLG+P L G    S   +DPAM 
Sbjct: 307  PNTAPLPNPWNPTPAQTPPAVPAAIPGGGFPDFSRLAGLGLPDL-GTMGGSGGLMDPAMI 365

Query: 525  IQALQHPATFQITDEVIHN----------DPQSSSLVDFNPQVLDALQNPGMSMSQL--- 385
             Q LQ+P   ++   ++ N           PQ  ++++ NP   D +QNP      +   
Sbjct: 366  QQMLQNPQIQEMMQGILSNPAYMNQIMNMQPQLRAMLNQNPHFRDMMQNPDFIRQMINPE 425

Query: 384  ASRRRFQQSRAFLSSPIGSMP 322
            + ++  Q  +A +    G +P
Sbjct: 426  SLQQLMQLQQAMMGQRGGQLP 446


>gb|ABX75362.1| hypothetical protein LBL8 [Panax quinquefolius]
          Length = 249

 Score = 92.0 bits (227), Expect(2) = 7e-25
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 45/184 (24%)
 Frame = -2

Query: 744 NMLRQRYENVHEPLLNA------QHDPWGSNA--------------------ATRGFLSN 643
           NMLR+ YENV EPLL+A        +  GSN                     +T G  SN
Sbjct: 2   NMLRRMYENVQEPLLSATTMTGSNGNDLGSNPFAALLGSQVGGQVEDRPITPSTMGLDSN 61

Query: 642 --------NTLRN-----------RAAGSNVPGFAGLGIPGLSGLDAQSRSFIDPAMRIQ 520
                   N L N           +A G+NVPG  G    GLSG D      +DP+M IQ
Sbjct: 62  SGSSVPNSNPLPNPWRCASATGGTQAGGANVPGIGGFEALGLSGTDTPFGGLLDPSMMIQ 121

Query: 519 ALQHPATFQITDEVIHNDPQSSSLVDFNPQVLDALQNPGMSMSQLASRRRFQQSRAFLSS 340
            LQ+PA  Q+ ++++  DPQ  ++VD NPQ+ +A+QNP + + QLAS    QQ+ A LSS
Sbjct: 122 LLQNPAVPQLMNQMVDMDPQLRAMVDANPQMREAMQNPELLLGQLAS-PDMQQAMASLSS 180

Query: 339 PIGS 328
             G+
Sbjct: 181 LFGT 184



 Score = 49.3 bits (116), Expect(2) = 7e-25
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = -1

Query: 217 GLTARGAVRPEEIHGNHLSELQEMGFNDNCANLRALIAT 101
           G T RGAV PEE++ + LS+LQEMGF D   N++AL+AT
Sbjct: 194 GQTGRGAVPPEELYASQLSQLQEMGFIDTRENIQALLAT 232