BLASTX nr result

ID: Cnidium21_contig00010662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010662
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis...   329   6e-88
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87
ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [...   327   2e-87
ref|XP_002526504.1| protein with unknown function [Ricinus commu...   327   3e-87
ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thalian...   326   5e-87

>ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
          Length = 208

 Score =  329 bits (844), Expect = 6e-88
 Identities = 176/208 (84%), Positives = 177/208 (85%), Gaps = 1/208 (0%)
 Frame = +3

Query: 174 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 353
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 354 QLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTVKWIEEVRSERGSDVIIVLV 533
           QLWDTAGQERFRSLIPSYIR             RQSFLNT KWIEEVR+ERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120

Query: 534 GNKTDLVDKRQVSIEEAEAKAGDQNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 713
           GNKTDLVDKRQVSIEE EAKA D NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 714 QEDMVDVNLK-XXXXXXXXXXXXGGCYC 794
           QEDMVDVNLK             GGC C
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQAGGCSC 208


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  328 bits (842), Expect = 1e-87
 Identities = 176/208 (84%), Positives = 177/208 (85%), Gaps = 1/208 (0%)
 Frame = +3

Query: 174 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 353
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 354 QLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTVKWIEEVRSERGSDVIIVLV 533
           QLWDTAGQERFRSLIPSYIR             RQSFLNT KWIEEVRSERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLV 120

Query: 534 GNKTDLVDKRQVSIEEAEAKAGDQNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 713
           GNKTDLVDKRQVSIEE EAKA D NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSK 180

Query: 714 QEDMVDVNLK-XXXXXXXXXXXXGGCYC 794
           QEDMVDVNLK             GGC C
Sbjct: 181 QEDMVDVNLKSSNANASQSQQQSGGCAC 208


>ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
          Length = 207

 Score =  327 bits (839), Expect = 2e-87
 Identities = 172/207 (83%), Positives = 176/207 (85%)
 Frame = +3

Query: 174 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 353
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 354 QLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTVKWIEEVRSERGSDVIIVLV 533
           QLWDTAGQERFRSLIPSYIR             RQ+FLNT KWIEEVR+ERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120

Query: 534 GNKTDLVDKRQVSIEEAEAKAGDQNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 713
           GNKTDLV+KRQVSIEE EAKA + NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 714 QEDMVDVNLKXXXXXXXXXXXXGGCYC 794
           QEDMVDVNLK             GC C
Sbjct: 181 QEDMVDVNLKSTTGSAQSQPQPSGCAC 207


>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
           gi|223534179|gb|EEF35895.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score =  327 bits (838), Expect = 3e-87
 Identities = 175/208 (84%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
 Frame = +3

Query: 174 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 353
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 354 QLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTVKWIEEVRSERGSDVIIVLV 533
           QLWDTAGQERFRSLIPSYIR             RQSFLNT KWIEEVR+ERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 534 GNKTDLVDKRQVSIEEAEAKAGDQNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 713
           GNKTDLVDKRQVSIEE EAKA D NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 714 QEDMVDVNLK-XXXXXXXXXXXXGGCYC 794
           QEDMVDVNLK             GGC C
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQSGGCAC 208


>ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
           gi|297828175|ref|XP_002881970.1| hypothetical protein
           ARALYDRAFT_903887 [Arabidopsis lyrata subsp. lyrata]
           gi|75318653|sp|O80501.1|RAH1B_ARATH RecName:
           Full=Ras-related protein RABH1b; Short=AtRABH1b;
           AltName: Full=Ras-related protein Rab6A; Short=AtRab6A
           gi|3341681|gb|AAC27463.1| putative small GTP-binding
           protein [Arabidopsis thaliana]
           gi|21593488|gb|AAM65455.1| putative small GTP-binding
           protein [Arabidopsis thaliana]
           gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis
           thaliana] gi|110742258|dbj|BAE99055.1| putative small
           GTP-binding protein [Arabidopsis thaliana]
           gi|297327809|gb|EFH58229.1| hypothetical protein
           ARALYDRAFT_903887 [Arabidopsis lyrata subsp. lyrata]
           gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B
           [Arabidopsis thaliana] gi|741994|prf||2008312A
           GTP-binding protein
          Length = 208

 Score =  326 bits (836), Expect = 5e-87
 Identities = 173/208 (83%), Positives = 177/208 (85%), Gaps = 1/208 (0%)
 Frame = +3

Query: 174 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 353
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 354 QLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTVKWIEEVRSERGSDVIIVLV 533
           QLWDTAGQERFRSLIPSYIR             RQSFLNT KWI+EVR+ERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 534 GNKTDLVDKRQVSIEEAEAKAGDQNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 713
           GNKTDLVDKRQVSIEEAEAKA + NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 714 QEDMVDVNLK-XXXXXXXXXXXXGGCYC 794
           QEDMVDVNLK             GGC C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208


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