BLASTX nr result
ID: Cnidium21_contig00010644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010644
(935 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|2... 478 e-132
ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 466 e-129
emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera] 465 e-129
ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig... 463 e-128
ref|XP_002525919.1| Protein pim1, putative [Ricinus communis] gi... 460 e-127
>ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|222873146|gb|EEF10277.1|
predicted protein [Populus trichocarpa]
Length = 462
Score = 478 bits (1229), Expect = e-132
Identities = 224/262 (85%), Positives = 242/262 (92%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIAQVSCGEYHSAAISDKGEVYT 323
GYNE+GQLGRG TCEGLQGARVI AYAKFLDEAPELVKI QVSCGEYH+AAIS+KGEVYT
Sbjct: 190 GYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISEKGEVYT 249
Query: 324 WGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWKGALYVWGSSR 503
WGLGNMGQLGH SLQSGDKELLPRRVVALDGIFIK++ACGGVHTCA + KGALY WG +
Sbjct: 250 WGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQKGALYAWGGGQ 309
Query: 504 AGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGY 683
AGQLGLGPQTG FS +P++S + LRNIP L +P+ V+HVACGHSHTL+S RDGRIHGWGY
Sbjct: 310 AGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDVQHVACGHSHTLVSMRDGRIHGWGY 369
Query: 684 NSYGQAANEKCTYAWYPSPVDWCVGEIRKLAAGGGHSAVLTDACSLKELCEFRLAEGVTL 863
NSYGQAANEK TYAWYPSPVDWCVGE+RKLAAGGGHSAVLTDACSLKELCEFRLAE VTL
Sbjct: 370 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAENVTL 429
Query: 864 SNASQIVDVASRTGSDALARLC 929
SNAS+I DVASRTG+DALARLC
Sbjct: 430 SNASEIEDVASRTGADALARLC 451
Score = 79.0 bits (193), Expect = 2e-12
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGA-RVIKAYAKFLDEAPE--LVKIAQVSCGEYHSAAISDKGE 314
GYN+ GQ GR +G G R+ K L P + ++CG H+AA++ G
Sbjct: 26 GYNQSGQTGR----KGKDGQLRIPKQLPPELFGCPAGANARWLDIACGREHTAAVASDGS 81
Query: 315 VYTWGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWK------- 473
++TWG GQLG + D P++V L+ F+K+++CG T A++
Sbjct: 82 LFTWGANEFGQLGD---GTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTI 138
Query: 474 -GALYVWGSSRAGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLIS 650
L+VWG ++ P+ + PN + + V+CG H +
Sbjct: 139 LSRLWVWGQNQGSNY---PRLFCGAFSPN---------------TIICQVSCGAVHVVAL 180
Query: 651 TRDGRIHGWGYNSYGQ 698
+ DG + WGYN YGQ
Sbjct: 181 SEDGLLQAWGYNEYGQ 196
>ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 466 bits (1200), Expect = e-129
Identities = 217/262 (82%), Positives = 237/262 (90%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIAQVSCGEYHSAAISDKGEVYT 323
GYNE GQLGRG+TCEGLQGA +I +YAKFLDEAPELVKIA+VSCGEYH+AAISDKGEVYT
Sbjct: 190 GYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELVKIAKVSCGEYHTAAISDKGEVYT 249
Query: 324 WGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWKGALYVWGSSR 503
WGLGNMGQLGH SLQ GDKELLPRRVV LDGIFIK++ACGGVHTCAL+ GALY WG +
Sbjct: 250 WGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQGGALYTWGGGQ 309
Query: 504 AGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGY 683
+GQLGLGPQTGLFSCV NDS T RNIPVL +P GV+ VACGHSHTLIS DGRIHGWGY
Sbjct: 310 SGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGHSHTLISMSDGRIHGWGY 369
Query: 684 NSYGQAANEKCTYAWYPSPVDWCVGEIRKLAAGGGHSAVLTDACSLKELCEFRLAEGVTL 863
N+YGQAANEKCTYAWYPSPVDWCVGE+RKLAAGGGHSAVLTDACSLKELCEF LA+ +TL
Sbjct: 370 NNYGQAANEKCTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFVLADSMTL 429
Query: 864 SNASQIVDVASRTGSDALARLC 929
SNA+++ D+A RTGSDAL RLC
Sbjct: 430 SNAAKVEDIAYRTGSDALVRLC 451
Score = 78.2 bits (191), Expect = 3e-12
Identities = 79/284 (27%), Positives = 110/284 (38%), Gaps = 58/284 (20%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIA--QVSCGEYHSAAISDKGEV 317
GYN+ GQ GR + L R+ K L P V+CG H+AAI+ G +
Sbjct: 25 GYNQSGQTGRKGKEDQL---RIPKQLPPELFGCPAGTNACWLDVACGREHTAAIASDGSL 81
Query: 318 YTWGLGNMGQLG----------------------------HCSL-----QSGDKELLPRR 398
+TWG + GQLG HCS + D + RR
Sbjct: 82 FTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGSISTRR 141
Query: 399 VVA--------LDGIF---------IKNIACGGVHTCALSWKGALYVWGSSRAGQLGLGP 527
+ L +F I+ ++CG VH ALS +G L WG + GQLG G
Sbjct: 142 LWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVVALSDEGLLQAWGYNECGQLGRGV 201
Query: 528 Q-TGLFSC-VPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGYNSYGQA 701
GL + + L P L + V+CG HT + G ++ WG + GQ
Sbjct: 202 TCEGLQGAHIISSYAKFLDEAPELV---KIAKVSCGEYHTAAISDKGEVYTWGLGNMGQL 258
Query: 702 ANEKCTYA---WYPSPVDWCVG-EIRKLAAGGGHSAVLTDACSL 821
+ Y P V G I+ +A GG H+ LT +L
Sbjct: 259 GHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQGGAL 302
>emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
Length = 461
Score = 465 bits (1196), Expect = e-129
Identities = 220/264 (83%), Positives = 243/264 (92%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIAQVSCGEYHSAAISDKGEVYT 323
GYNE+GQLGRGITCEGLQGARVI AY+KFL+EAPELVKI QVSCGEYH+AAIS+ GEVYT
Sbjct: 190 GYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYHTAAISENGEVYT 249
Query: 324 WGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWKGALYVWGSSR 503
WGLGNMGQLGHCSLQ GDKEL+PRRVVALDGI IK+IACGGVHTCAL+ KGALY WG +
Sbjct: 250 WGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALTSKGALYAWGGGQ 309
Query: 504 AGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGY 683
AGQLGLGPQ+GLFSC N+S LL+NIPVL +P+GV+ +ACGHSHTLIS +DGRI GWGY
Sbjct: 310 AGQLGLGPQSGLFSCNLNESDMLLQNIPVLVVPTGVQLIACGHSHTLISMKDGRICGWGY 369
Query: 684 NSYGQAANEKCTYAWYPSPVDWCVGEIRKLAAGGGHSAVLTDACSLKELCEFRLAEGVTL 863
NSYGQAANEK TYAWYPSP+DWCVGE+R+LAAGGGHSAVLTDACSLKELCEFRLA+ VT
Sbjct: 370 NSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTP 429
Query: 864 SNASQIVDVASRTGSDALARLCEK 935
SNAS+I DVASRTGSDALARLCE+
Sbjct: 430 SNASEIEDVASRTGSDALARLCER 453
Score = 77.4 bits (189), Expect = 4e-12
Identities = 78/287 (27%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELV--KIAQVSCGEYHSAAISDKGEV 317
GYN+ GQ GR + LQ R+ K L P + ++CG H+AA++ G +
Sbjct: 25 GYNQRGQTGRN--GKELQ-LRIPKQLPPELFGCPAGANSRWLSIACGREHTAAVASDGSL 81
Query: 318 YTWGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKN---------------------- 431
+TWG + GQLG + G K P++V L F+K+
Sbjct: 82 FTWGANDFGQLGD-GTEDGRKH--PKKVKQLQTEFVKSXSCGAHCTAAIAEPREKNGIVS 138
Query: 432 -------------------------------IACGGVHTCALSWKGALYVWGSSRAGQLG 518
++CG VHT ALS +G + WG + GQLG
Sbjct: 139 TSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTVALSEEGLVQAWGYNEYGQLG 198
Query: 519 LG-PQTGLFSC-VPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGYNSY 692
G GL V N L P L + V+CG HT + +G ++ WG +
Sbjct: 199 RGITCEGLQGARVINAYSKFLNEAPELV---KITQVSCGEYHTAAISENGEVYTWGLGNM 255
Query: 693 GQAANEKCTYA---WYPSPVDWCVG-EIRKLAAGGGHSAVLTDACSL 821
GQ + Y P V G I+ +A GG H+ LT +L
Sbjct: 256 GQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALTSKGAL 302
>ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera] gi|298204453|emb|CBI16933.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 463 bits (1191), Expect = e-128
Identities = 219/264 (82%), Positives = 241/264 (91%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIAQVSCGEYHSAAISDKGEVYT 323
GYNE+GQLGRGITCEGLQGARVI AY+KF +EAPELVKI QVSCGEYH+AAIS+ GEVYT
Sbjct: 190 GYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYHTAAISENGEVYT 249
Query: 324 WGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWKGALYVWGSSR 503
WGLGNMGQLGHCSLQ GDKEL+PRRVVALDGI K+IACGGVHTCAL+ KGALY WG +
Sbjct: 250 WGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGVHTCALTSKGALYAWGGGQ 309
Query: 504 AGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGY 683
AGQLGLGPQ+GLFSC N+S LLRNIPVL +P+GV+ +ACGHSHTLIS +DGRI GWGY
Sbjct: 310 AGQLGLGPQSGLFSCNLNESDMLLRNIPVLVVPTGVQLIACGHSHTLISMKDGRICGWGY 369
Query: 684 NSYGQAANEKCTYAWYPSPVDWCVGEIRKLAAGGGHSAVLTDACSLKELCEFRLAEGVTL 863
NSYGQAANEK TYAWYPSP+DWCVGE+R+LAAGGGHSAVLTDACSLKELCEFRLA+ VT
Sbjct: 370 NSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTP 429
Query: 864 SNASQIVDVASRTGSDALARLCEK 935
SNAS+I DVASRTGSDALARLCE+
Sbjct: 430 SNASEIEDVASRTGSDALARLCER 453
Score = 79.3 bits (194), Expect = 1e-12
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELV--KIAQVSCGEYHSAAISDKGEV 317
GYN+ GQ GR + LQ R+ K L P + ++CG H+AA++ G +
Sbjct: 25 GYNQRGQTGRN--GKELQ-LRIPKQLPPELFGCPAGANSRWLSIACGREHTAAVASDGSL 81
Query: 318 YTWGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALS---------W 470
+TWG + GQLG + G K P++V L F+K+I+CG T A++
Sbjct: 82 FTWGANDFGQLGD-GTEDGRKH--PKKVKQLQTEFVKSISCGAHCTAAIAEPREKNGIVS 138
Query: 471 KGALYVWGSSRAGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLIS 650
L+VWG ++ P + PN T++R V+CG HT+
Sbjct: 139 TSRLWVWGQNQGSNY---PHLFWGAFTPN---TIIR------------QVSCGAVHTVAL 180
Query: 651 TRDGRIHGWGYNSYGQ 698
+ +G + WGYN YGQ
Sbjct: 181 SEEGLVQAWGYNEYGQ 196
>ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative
[Ricinus communis]
Length = 478
Score = 460 bits (1183), Expect = e-127
Identities = 217/262 (82%), Positives = 238/262 (90%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGLQGARVIKAYAKFLDEAPELVKIAQVSCGEYHSAAISDKGEVYT 323
GYNE+GQLGRGITCEGLQG RVI AYAKFLDEAPELVKI +VSCGEYH+AAIS+KGEVYT
Sbjct: 192 GYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEKGEVYT 251
Query: 324 WGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALSWKGALYVWGSSR 503
WGLG+ GQLGH SLQSG+KELLPRRVVALDGI I ++ACGGVHTCA++ KGALY WG S+
Sbjct: 252 WGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGALYAWGGSQ 311
Query: 504 AGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLISTRDGRIHGWGY 683
GQLGLGPQTG FS +P+D+ + LRNIP L P+GV+ VACGHSHTLI RDGRIHGWGY
Sbjct: 312 FGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIHGWGY 371
Query: 684 NSYGQAANEKCTYAWYPSPVDWCVGEIRKLAAGGGHSAVLTDACSLKELCEFRLAEGVTL 863
NSYGQAANEK TYAWYPSPVDWCVGE+RKLAAGGGHSAVLTDACSLKELCEFRLA+ VTL
Sbjct: 372 NSYGQAANEKTTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLADSVTL 431
Query: 864 SNASQIVDVASRTGSDALARLC 929
SNAS+I DVASRTG+DALARLC
Sbjct: 432 SNASEIEDVASRTGADALARLC 453
Score = 78.2 bits (191), Expect = 3e-12
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Frame = +3
Query: 144 GYNEFGQLGRGITCEGL-QGARVIKAYAKFLDEAPE--LVKIAQVSCGEYHSAAISDKGE 314
GYN GQ GR +G Q R+ K + L P + ++CG H+AA++ G
Sbjct: 27 GYNHNGQTGR----KGKEQELRIPKQLSPELFGCPAGANARWLDIACGREHTAAVASDGS 82
Query: 315 VYTWGLGNMGQLGHCSLQSGDKELLPRRVVALDGIFIKNIACGGVHTCALS--------- 467
++TWG GQLG + G K P++V L+ F+K+++CG T A++
Sbjct: 83 LFTWGANEFGQLGD-GTEEGKK--YPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTI 139
Query: 468 WKGALYVWGSSRAGQLGLGPQTGLFSCVPNDSPTLLRNIPVLAIPSGVEHVACGHSHTLI 647
L+VWG ++ ++ P L A+ + + V+CG H +
Sbjct: 140 STSRLWVWGQNQG----------------SNYPRLFSG--AFALNTIICQVSCGAVHVVA 181
Query: 648 STRDGRIHGWGYNSYGQ 698
+ DG + WGYN YGQ
Sbjct: 182 LSEDGLLQAWGYNEYGQ 198