BLASTX nr result

ID: Cnidium21_contig00010631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010631
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   433   e-119
ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   428   e-117
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              428   e-117
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   405   e-110
ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109

>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
            gi|223527332|gb|EEF29478.1| rRNA methylase, putative
            [Ricinus communis]
          Length = 334

 Score =  433 bits (1114), Expect = e-119
 Identities = 213/285 (74%), Positives = 243/285 (85%), Gaps = 1/285 (0%)
 Frame = -3

Query: 1086 QSDENCNRDTVEQLLNKTDDVSTFMKMERRPEGESGFTESTRWFPYLNEFRAGDVVLNSD 907
            +S ++   +TVE LL+  DDV   MKMERRP+ E      +RWFPYL+ ++ G   L+  
Sbjct: 53   ESADDSKNETVEHLLSNRDDVLRLMKMERRPDAEKS---GSRWFPYLDRYKCGSGELSGS 109

Query: 906  QVLESVDSYIMESRKSRFVNAVNNRSYAVCLVVEGLSDFGNVSAVFRSADALGIQSLHVV 727
            +VLE+V  YIME RK RF N V NRSY+VCLVVEGLSDFGNVSA FRSADALG QS+HVV
Sbjct: 110  EVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVV 169

Query: 726  SCNSSKRYRENRHVSMGAEKWLDIELWDSTKECFEVLKSRGYRIATTHVGMDAVSVHDMD 547
            SC+SSKRYR+NRHVSMGAEKWLDIELWDST+ECFEVLKSRGYRIATTHVGMDAVS++DMD
Sbjct: 170  SCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVGMDAVSIYDMD 229

Query: 546  WTCPTAIVLGNEKRGISDEALSLSDLHCSIPMRGMVDSFNVSVAAGILMYHAVCDRTSRM 367
            W+CPTAIV+GNE RGISDEAL LSDLHCSIPM+GMVDSFNVSVAAGILM+ AVCDRTSR+
Sbjct: 230  WSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHQAVCDRTSRL 289

Query: 366  GFHGDLTPSESKILLAEFSLRHSRSALSIAHEYAKRK-VKPTPKL 235
            G HGDLT +ES++LLAEFSLRHS+SA+SIAHEYAKRK   P PKL
Sbjct: 290  GSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334


>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
            vinifera]
          Length = 372

 Score =  428 bits (1101), Expect = e-117
 Identities = 214/298 (71%), Positives = 250/298 (83%), Gaps = 4/298 (1%)
 Frame = -3

Query: 1116 YATESI-LDEQQSDENCNRDTVEQLLNKTDDVSTFMKMERRP-EGESG-FTESTRWFPYL 946
            +  ES+ ++    +++ N+D VE LL  TDDV   MKMERR   G+ G   +S RWFPYL
Sbjct: 75   HVAESVGVETTDLEDDSNKDIVEHLLTNTDDVGRLMKMERRSMTGDGGELIQSKRWFPYL 134

Query: 945  NEFRAGDVVLNSDQVLESVDSYIMESRKSRFVNAVNNRSYAVCLVVEGLSDFGNVSAVFR 766
            ++F+ G   L+S ++LE++D YIME RK RF N V +RSY+VCLVVEGL DFGNVSA FR
Sbjct: 135  DKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFR 194

Query: 765  SADALGIQSLHVVSCNSSKRYRENRHVSMGAEKWLDIELWDSTKECFEVLKSRGYRIATT 586
            SADALG QS+HVVSC+SSKRY++NRHVSMGAEKWLDIELW+ST+ECFEVLKSRGYRIATT
Sbjct: 195  SADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATT 254

Query: 585  HVGMDAVSVHDMDWTCPTAIVLGNEKRGISDEALSLSDLHCSIPMRGMVDSFNVSVAAGI 406
            HVGMDAVS++DMDWTCPTAIV+GNE RGISDEAL LSDLHCSIPM+GMVDSFNVSVAAGI
Sbjct: 255  HVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGI 314

Query: 405  LMYHAVCDRTSRMGFHGDLTPSESKILLAEFSLRHSRSALSIAHEYAKRK-VKPTPKL 235
            LM+HAVCDRTSR+G HGDL+  ES+ILLAEFSLRHS+SA SIAHE+AKRK   P  KL
Sbjct: 315  LMHHAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 372


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  428 bits (1101), Expect = e-117
 Identities = 214/298 (71%), Positives = 250/298 (83%), Gaps = 4/298 (1%)
 Frame = -3

Query: 1116 YATESI-LDEQQSDENCNRDTVEQLLNKTDDVSTFMKMERRP-EGESG-FTESTRWFPYL 946
            +  ES+ ++    +++ N+D VE LL  TDDV   MKMERR   G+ G   +S RWFPYL
Sbjct: 72   HVAESVGVETTDLEDDSNKDIVEHLLTNTDDVGRLMKMERRSMTGDGGELIQSKRWFPYL 131

Query: 945  NEFRAGDVVLNSDQVLESVDSYIMESRKSRFVNAVNNRSYAVCLVVEGLSDFGNVSAVFR 766
            ++F+ G   L+S ++LE++D YIME RK RF N V +RSY+VCLVVEGL DFGNVSA FR
Sbjct: 132  DKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFR 191

Query: 765  SADALGIQSLHVVSCNSSKRYRENRHVSMGAEKWLDIELWDSTKECFEVLKSRGYRIATT 586
            SADALG QS+HVVSC+SSKRY++NRHVSMGAEKWLDIELW+ST+ECFEVLKSRGYRIATT
Sbjct: 192  SADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATT 251

Query: 585  HVGMDAVSVHDMDWTCPTAIVLGNEKRGISDEALSLSDLHCSIPMRGMVDSFNVSVAAGI 406
            HVGMDAVS++DMDWTCPTAIV+GNE RGISDEAL LSDLHCSIPM+GMVDSFNVSVAAGI
Sbjct: 252  HVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGI 311

Query: 405  LMYHAVCDRTSRMGFHGDLTPSESKILLAEFSLRHSRSALSIAHEYAKRK-VKPTPKL 235
            LM+HAVCDRTSR+G HGDL+  ES+ILLAEFSLRHS+SA SIAHE+AKRK   P  KL
Sbjct: 312  LMHHAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 369


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Cucumis
            sativus]
          Length = 370

 Score =  405 bits (1042), Expect = e-110
 Identities = 204/302 (67%), Positives = 243/302 (80%), Gaps = 3/302 (0%)
 Frame = -3

Query: 1152 TAC-ASTQLDVSDYATESILDEQQSDENCNRDTVEQLLNKTDDVSTFMKMERRPEGESG- 979
            T C AS     S    E I+ + +  E   +DTVE LL  ++DV+  MKMERR     G 
Sbjct: 58   TRCFASISAATSPLEVEDIVADVEPPEVRTQDTVEHLLTHSNDVARLMKMERRSVELDGA 117

Query: 978  -FTESTRWFPYLNEFRAGDVVLNSDQVLESVDSYIMESRKSRFVNAVNNRSYAVCLVVEG 802
             +    RWFPYL+++  G   LNS ++LE++DS I++SRK RF N V NRSY+VCLVVEG
Sbjct: 118  EYPHKGRWFPYLDKYSCGSSWLNSGEILEALDSLILDSRKERFKNVVRNRSYSVCLVVEG 177

Query: 801  LSDFGNVSAVFRSADALGIQSLHVVSCNSSKRYRENRHVSMGAEKWLDIELWDSTKECFE 622
            L+DFGNVSA FRSADALG QS+HVVSC++SKRYRENRHVSMGAEKWLDIELW+ST ECF+
Sbjct: 178  LTDFGNVSAAFRSADALGFQSVHVVSCDASKRYRENRHVSMGAEKWLDIELWNSTPECFK 237

Query: 621  VLKSRGYRIATTHVGMDAVSVHDMDWTCPTAIVLGNEKRGISDEALSLSDLHCSIPMRGM 442
            +LKSRGYRI +TH+G +AVSV+DMDW+CPTAIV+GNE RGIS+EAL LSDLHCSIPM GM
Sbjct: 238  ILKSRGYRIVSTHLGANAVSVYDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGM 297

Query: 441  VDSFNVSVAAGILMYHAVCDRTSRMGFHGDLTPSESKILLAEFSLRHSRSALSIAHEYAK 262
            VDSFNVSVAAGILM+HAVC+RTSR+G HGDLT  E +ILLAEFSLRHS+SA+SIA+E AK
Sbjct: 298  VDSFNVSVAAGILMHHAVCNRTSRLGCHGDLTSEERQILLAEFSLRHSKSAISIANELAK 357

Query: 261  RK 256
            RK
Sbjct: 358  RK 359


>ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  401 bits (1031), Expect = e-109
 Identities = 196/268 (73%), Positives = 228/268 (85%), Gaps = 2/268 (0%)
 Frame = -3

Query: 1032 DDVSTFMKMERR-PEGESGFTESTRWFPYLNEFRAGDVVLNSDQVLESVDSYIMESRKSR 856
            DDV   MKMERR  +        + WFPY + F+   V L+S +VLE+V  Y+ME RK R
Sbjct: 2    DDVLRLMKMERRITKTHDDTVLGSHWFPYFDRFKCEGVDLSSSEVLEAVGPYMMEERKER 61

Query: 855  FVNAVNNRSYAVCLVVEGLSDFGNVSAVFRSADALGIQSLHVVSCNSSKRYRENRHVSMG 676
              N V +RSY++CLVVEGL+DFGNVSAVFRSADALG QS+HV+SC+SSKRY+ENRHVSMG
Sbjct: 62   IRNTVKSRSYSLCLVVEGLTDFGNVSAVFRSADALGFQSVHVISCDSSKRYKENRHVSMG 121

Query: 675  AEKWLDIELWDSTKECFEVLKSRGYRIATTHVGMDAVSVHDMDWTCPTAIVLGNEKRGIS 496
            AEKWLDIELWDS K+CF+VLKSRGYRIATTHVG+DAVS++DMDW+CPTAIV+GNE RGIS
Sbjct: 122  AEKWLDIELWDSAKDCFQVLKSRGYRIATTHVGIDAVSIYDMDWSCPTAIVVGNENRGIS 181

Query: 495  DEALSLSDLHCSIPMRGMVDSFNVSVAAGILMYHAVCDRTSRMGFHGDLTPSESKILLAE 316
            DEAL LSDLHCSIPM+GMVDSFNVSVAAGILM+HAVCDRTSR+G HGDLTP E++ILLAE
Sbjct: 182  DEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLTPEETQILLAE 241

Query: 315  FSLRHSRSALSIAHEYAKRK-VKPTPKL 235
            FSLRHS++ +SIAH+YAKRK   P PKL
Sbjct: 242  FSLRHSKNMISIAHDYAKRKAATPKPKL 269


Top