BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010623
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   524   e-146
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   524   e-146
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   521   e-145
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   520   e-145
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]       518   e-144

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  524 bits (1350), Expect = e-146
 Identities = 277/340 (81%), Positives = 283/340 (83%)
 Frame = +1

Query: 202  VSGFDMAPPGPAMLXXXXXXXXXXXXXXXXXXXXXXXXMLPNMFPITPGQFGALPAAMPV 381
            VSGFDMAPP  AML                        M PNMFP+  GQFGALP  MPV
Sbjct: 166  VSGFDMAPPASAMLAGAAAAADFTGQIPGTTPTIPG--MFPNMFPLASGQFGALPV-MPV 222

Query: 382  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK 561
            QAMTQQATRHARRVYVGGLSPTANEQSVATFFS VMSAIGGNTAGPGDAVVNVYINHEKK
Sbjct: 223  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKK 282

Query: 562  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGL 741
            FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL AVGL
Sbjct: 283  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 342

Query: 742  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 921
            TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 343  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 402

Query: 922  QDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQECVLLHAQQQIALQRLMLQPT 1101
            QDLSVTDIACAALNGIKMGDKTLTVRRANQG +QPKPEQE VLLHAQQQIALQRLM QP 
Sbjct: 403  QDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPG 462

Query: 1102 SVAASKVLCLTQVVTXXXXXXXXXXXXXXXXMRTECGKFG 1221
            ++ A+KV+CLTQVV                 MR E GKFG
Sbjct: 463  AL-ATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFG 501


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  524 bits (1350), Expect = e-146
 Identities = 277/340 (81%), Positives = 283/340 (83%)
 Frame = +1

Query: 202  VSGFDMAPPGPAMLXXXXXXXXXXXXXXXXXXXXXXXXMLPNMFPITPGQFGALPAAMPV 381
            VSGFDMAPP  AML                        M PNMFP+  GQFGALP  MPV
Sbjct: 166  VSGFDMAPPASAMLAGAAAAAGQIPGTTPTIPG-----MFPNMFPLASGQFGALPV-MPV 219

Query: 382  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK 561
            QAMTQQATRHARRVYVGGLSPTANEQSVATFFS VMSAIGGNTAGPGDAVVNVYINHEKK
Sbjct: 220  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKK 279

Query: 562  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGL 741
            FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL AVGL
Sbjct: 280  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 339

Query: 742  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 921
            TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 340  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 399

Query: 922  QDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQECVLLHAQQQIALQRLMLQPT 1101
            QDLSVTDIACAALNGIKMGDKTLTVRRANQG +QPKPEQE VLLHAQQQIALQRLM QP 
Sbjct: 400  QDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPG 459

Query: 1102 SVAASKVLCLTQVVTXXXXXXXXXXXXXXXXMRTECGKFG 1221
            ++ A+KV+CLTQVV                 MR E GKFG
Sbjct: 460  AL-ATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFG 498


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  521 bits (1341), Expect = e-145
 Identities = 272/340 (80%), Positives = 284/340 (83%)
 Frame = +1

Query: 202  VSGFDMAPPGPAMLXXXXXXXXXXXXXXXXXXXXXXXXMLPNMFPITPGQFGALPAAMPV 381
            +SGFDMAPP  AML                        M PNMFP+  GQFGALP  MP+
Sbjct: 174  ISGFDMAPPTSAMLPGITAAAGQVPGTNPPIPG-----MFPNMFPLASGQFGALPV-MPI 227

Query: 382  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK 561
            QAMTQQATRHARRVYVGGL   ANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKK
Sbjct: 228  QAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKK 287

Query: 562  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGL 741
            FAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQPNPNLNL AVGL
Sbjct: 288  FAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 347

Query: 742  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 921
            +PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 348  SPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 407

Query: 922  QDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQECVLLHAQQQIALQRLMLQPT 1101
            QD+SVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQE VLLHAQQQIALQRLMLQP 
Sbjct: 408  QDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPA 467

Query: 1102 SVAASKVLCLTQVVTXXXXXXXXXXXXXXXXMRTECGKFG 1221
            ++ A+KVL LT+V++                MRTECGKFG
Sbjct: 468  TL-ATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFG 506


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223535572|gb|EEF37240.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 549

 Score =  520 bits (1338), Expect = e-145
 Identities = 276/340 (81%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
 Frame = +1

Query: 202  VSGFDMAPPGPAMLXXXXXXXXXXXXXXXXXXXXXXXXMLPNMFPITPGQ-FGALPAAMP 378
            +SGFDMAPP  AML                        M PNMFP+  GQ FG LP  MP
Sbjct: 187  ISGFDMAPPPSAMLTGAAAVAAAAGQIPGTAPAIPG--MFPNMFPLGTGQQFGTLPV-MP 243

Query: 379  VQAMTQQATRHARRVYVGGLSPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEK 558
            VQAMTQQATRHARRVYVGGL PTANEQSVATFFSHVM+AIGGNTAGPGDAVVNVYINHEK
Sbjct: 244  VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEK 303

Query: 559  KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVG 738
            KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVG
Sbjct: 304  KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVG 363

Query: 739  LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 918
            LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV
Sbjct: 364  LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 423

Query: 919  YQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQECVLLHAQQQIALQRLMLQP 1098
            YQDLSVTDIACAALNGIKMGDKTLTVRRANQG  QPKPEQE VLLHAQQQIALQRLMLQP
Sbjct: 424  YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQETVLLHAQQQIALQRLMLQP 483

Query: 1099 TSVAASKVLCLTQVVTXXXXXXXXXXXXXXXXMRTECGKF 1218
                 +KV+CLTQVVT                MRTE GKF
Sbjct: 484  ---VPTKVVCLTQVVTADELKDDDEYEDILEDMRTEGGKF 520


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score =  518 bits (1333), Expect = e-144
 Identities = 271/339 (79%), Positives = 281/339 (82%)
 Frame = +1

Query: 202  VSGFDMAPPGPAMLXXXXXXXXXXXXXXXXXXXXXXXXMLPNMFPITPGQFGALPAAMPV 381
            +SGFDMAPP   ++                        + PNMF +  GQ GALP  MPV
Sbjct: 173  ISGFDMAPPTNPLMTGATSLPQVTGAAPAVPG------VFPNMFSLPTGQLGALPV-MPV 225

Query: 382  QAMTQQATRHARRVYVGGLSPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK 561
            QAMTQQATRHARRVYVGGL PTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK
Sbjct: 226  QAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKK 285

Query: 562  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGL 741
            FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL AVGL
Sbjct: 286  FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 345

Query: 742  TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 921
            TPGSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 346  TPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 405

Query: 922  QDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQECVLLHAQQQIALQRLMLQPT 1101
            QDLSVTDIACAALNGIKMGDKTLTVRRANQG TQPKPEQE VLLHAQQQIALQ+LMLQP 
Sbjct: 406  QDLSVTDIACAALNGIKMGDKTLTVRRANQGVTQPKPEQESVLLHAQQQIALQKLMLQPG 465

Query: 1102 SVAASKVLCLTQVVTXXXXXXXXXXXXXXXXMRTECGKF 1218
            ++ A+KVLCLTQVV+                MR ECGKF
Sbjct: 466  TL-ATKVLCLTQVVSADELRDDEDYADILEDMRLECGKF 503