BLASTX nr result

ID: Cnidium21_contig00010595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010595
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...   191   5e-47
gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis a...   191   5e-47
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   190   9e-47
ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arab...   190   1e-46

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/133 (70%), Positives = 115/133 (86%)
 Frame = +3

Query: 3   LAMNGTSEAFLHAVATENQLKRSNDSLLIFSLVYLVLNVLLIRSAGAIGLILANSLNMLF 182
           LAMNGTSEAFLHAVATE+QLKRSNDSLL+FSL+Y+V+NVLLI+SAGA+GLILANSLNM+ 
Sbjct: 324 LAMNGTSEAFLHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVGLILANSLNMIL 383

Query: 183 RIIYSAVFIGKYFQGTSSFSFRKCLPSGWMILPGFCLATLISERIFLDRDKFWPTFSIHL 362
           RIIYSAVFI  YFQ +S+FSF  CLPSGW +L    + TLISE++FLD + FWPTF IH 
Sbjct: 384 RIIYSAVFIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHENFWPTFLIHF 443

Query: 363 TVGVTCFSIAASV 401
           ++G+TCF I++ +
Sbjct: 444 SIGLTCFCISSFI 456


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/133 (69%), Positives = 107/133 (80%)
 Frame = +3

Query: 3   LAMNGTSEAFLHAVATENQLKRSNDSLLIFSLVYLVLNVLLIRSAGAIGLILANSLNMLF 182
           LAMNGTSEAFLHAV TEN+LKRSND LL+FSL+Y+ LN+LLIRSAGAIGLI+ANSLNM+F
Sbjct: 324 LAMNGTSEAFLHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIF 383

Query: 183 RIIYSAVFIGKYFQGTSSFSFRKCLPSGWMILPGFCLATLISERIFLDRDKFWPTFSIHL 362
           RIIYS  FI +YFQGTSSFSFRKC P GW IL    + TLISE+  LDR  FW TF +H 
Sbjct: 384 RIIYSGKFIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHF 443

Query: 363 TVGVTCFSIAASV 401
            +G  CF ++A V
Sbjct: 444 AIGFICFCLSAIV 456


>gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/133 (69%), Positives = 107/133 (80%)
 Frame = +3

Query: 3   LAMNGTSEAFLHAVATENQLKRSNDSLLIFSLVYLVLNVLLIRSAGAIGLILANSLNMLF 182
           LAMNGTSEAFLHAV TEN+LKRSND LL+FSL+Y+ LN+LLIRSAGAIGLI+ANSLNM+F
Sbjct: 324 LAMNGTSEAFLHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIF 383

Query: 183 RIIYSAVFIGKYFQGTSSFSFRKCLPSGWMILPGFCLATLISERIFLDRDKFWPTFSIHL 362
           RIIYS  FI +YFQGTSSFSFRKC P GW IL    + TLISE+  LDR  FW TF +H 
Sbjct: 384 RIIYSGKFIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHF 443

Query: 363 TVGVTCFSIAASV 401
            +G  CF ++A V
Sbjct: 444 AIGFICFCLSAIV 456


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/133 (69%), Positives = 113/133 (84%)
 Frame = +3

Query: 3   LAMNGTSEAFLHAVATENQLKRSNDSLLIFSLVYLVLNVLLIRSAGAIGLILANSLNMLF 182
           LAMNGTSEAF+HAVATE+QLKRSNDSLL+FSL+Y+VLNVLLIRSAGA+GLI+ANSLNM  
Sbjct: 366 LAMNGTSEAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTL 425

Query: 183 RIIYSAVFIGKYFQGTSSFSFRKCLPSGWMILPGFCLATLISERIFLDRDKFWPTFSIHL 362
           RI+YSA+FI  YFQG+SSFSF  CLPSGW+ L    + TLISE + LDRD F P+F +HL
Sbjct: 426 RILYSAIFIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNFXPSFILHL 485

Query: 363 TVGVTCFSIAASV 401
           +VG+ CF +++ V
Sbjct: 486 SVGLVCFCVSSYV 498


>ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arabidopsis lyrata subsp.
           lyrata] gi|297317117|gb|EFH47539.1| hypothetical protein
           ARALYDRAFT_325378 [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  190 bits (482), Expect = 1e-46
 Identities = 93/133 (69%), Positives = 106/133 (79%)
 Frame = +3

Query: 3   LAMNGTSEAFLHAVATENQLKRSNDSLLIFSLVYLVLNVLLIRSAGAIGLILANSLNMLF 182
           LAMNGTSEAFLHAV TEN+LKRSND LL+FSL+Y+ LN+LLIRSAGAIGLI+ANSLNM+F
Sbjct: 324 LAMNGTSEAFLHAVGTENELKRSNDMLLVFSLIYVALNILLIRSAGAIGLIMANSLNMIF 383

Query: 183 RIIYSAVFIGKYFQGTSSFSFRKCLPSGWMILPGFCLATLISERIFLDRDKFWPTFSIHL 362
           RIIYS  FI  YFQGTSSFSFRKC P GW IL    + TLISE+  LDR  FW TF +H 
Sbjct: 384 RIIYSGKFIQHYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHF 443

Query: 363 TVGVTCFSIAASV 401
            +G  CF ++A V
Sbjct: 444 AIGFICFCLSAIV 456


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