BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010588
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528699.1| transcription elongation factor s-II, putati...   380   e-103
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   375   e-101
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea ma...   363   6e-98
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   358   1e-96

>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
            gi|223531871|gb|EEF33688.1| transcription elongation
            factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  380 bits (975), Expect = e-103
 Identities = 196/361 (54%), Positives = 256/361 (70%)
 Frame = -1

Query: 1128 AAAAENDAVEGLSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGKRLRHLTKHPRKKIQALA 949
            A AA +D V    PE  RC+D LKQL+  P++YD+LVS+QVGKRLR LTKHPR+KIQ +A
Sbjct: 16   ADAAASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVA 75

Query: 948  SQLIETWKNIVVEETLKKNRMGSLDNKVDLNSQPISAGSLEGIKVENVETLKVEKNESSA 769
            S L+E WK IV++ET +K   G++DNK  + ++           V  VET+KVEK + ++
Sbjct: 76   SDLLEMWKKIVIDETTRKKN-GTVDNKSSVKAE-----------VSKVETIKVEKVQKAS 123

Query: 768  ALRSENFVKYENNSDEDRIEIYDDVRIEGTASGKREAVVTLASKGKQNVDVIKSTQSMSS 589
             ++ E         D +R      V++E  +  K++A+           DV K +Q+  +
Sbjct: 124  TVKVEKI-------DRERT-----VKVEKKSEEKQQAI-----------DVKKPSQASVT 160

Query: 588  APKLSSLIRCNDPVRDKIRELLLQALNKVPAEVEERQRGEVDACDPIRVAVCLESAMFEK 409
             PKL+++++CND +RDKIRELL++AL+KV +E  E  R E+  CDPIRVAV +ESAMFEK
Sbjct: 161  PPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMFEK 220

Query: 408  WGRSTGAQKVKYRSIIFNIGDSSNPDFRRKVLLGRVKPEKVLEMKPEEMASHERQRQNKQ 229
             GRS GAQK KYRSI+FN+ D +NPD RRKVLLG VKPE+++ M PEEMAS ERQ +  Q
Sbjct: 221  MGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQ 280

Query: 228  IKDKALFECERGKQAEATTNSFKCGRCGKRKCTYYQLQTRSADEPMTTFVTCVNCNKRWK 49
            IK+KALF+CERG  A+ATT+ FKC RCG+RKCTYYQ+QTRSADEPMTT+VTCVNCNK WK
Sbjct: 281  IKEKALFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNKHWK 340

Query: 48   F 46
            F
Sbjct: 341  F 341


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
            vinifera]
          Length = 367

 Score =  375 bits (963), Expect = e-101
 Identities = 197/372 (52%), Positives = 250/372 (67%), Gaps = 11/372 (2%)
 Frame = -1

Query: 1128 AAAAENDAVEGLSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGKRLRHLTKHPRKKIQALA 949
            A AA  D V    PE  RC+D LKQL+  PV Y+ L STQVGKRLRHLTKHP+ KIQ+LA
Sbjct: 16   ADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLA 75

Query: 948  SQLIETWKNIVVEETLKKNRMGSLDNKVDLNSQPISAGSLE--------GIKVEN---VE 802
            S L+E WK +V++ET  K   G LDN     ++     +++        G+KVE    VE
Sbjct: 76   SDLLEMWKKVVIDETRNKKN-GGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVE 134

Query: 801  TLKVEKNESSAALRSENFVKYENNSDEDRIEIYDDVRIEGTASGKREAVVTLASKGKQNV 622
            T+K+EK +  ++ +  +  + E    E R+E  D+                     KQ  
Sbjct: 135  TVKIEKFDRGSSTKPGSVSRSETIKVEKRVENVDE--------------------RKQFS 174

Query: 621  DVIKSTQSMSSAPKLSSLIRCNDPVRDKIRELLLQALNKVPAEVEERQRGEVDACDPIRV 442
             V K  Q+ +  PKL+++I+CND +RDK+RELL +AL KV +E +E  + EV+ACDPIRV
Sbjct: 175  SVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRV 234

Query: 441  AVCLESAMFEKWGRSTGAQKVKYRSIIFNIGDSSNPDFRRKVLLGRVKPEKVLEMKPEEM 262
            AV +ES MFEK GRS G QK KYRSI+FNI D +NPD RRKVLLG VKP++++ M PEEM
Sbjct: 235  AVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEM 294

Query: 261  ASHERQRQNKQIKDKALFECERGKQAEATTNSFKCGRCGKRKCTYYQLQTRSADEPMTTF 82
            AS++RQR+N QIK+KALF+CERG   +ATT+ FKCGRCG+RK TYYQLQTRSADEPMTTF
Sbjct: 295  ASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354

Query: 81   VTCVNCNKRWKF 46
            VTCVNCN  WKF
Sbjct: 355  VTCVNCNNHWKF 366


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  372 bits (956), Expect = e-101
 Identities = 197/361 (54%), Positives = 252/361 (69%)
 Frame = -1

Query: 1128 AAAAENDAVEGLSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGKRLRHLTKHPRKKIQALA 949
            A A+ ND V    PE  RC+D LKQL K  V  ++LVSTQVGK+LR L KHP++KI+A+A
Sbjct: 16   ADASLNDDVSSSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVA 75

Query: 948  SQLIETWKNIVVEETLKKNRMGSLDNKVDLNSQPISAGSLEGIKVENVETLKVEKNESSA 769
            S L+E WK +V++ET KKN  GS+D+K  + ++           V   ET+KVEK     
Sbjct: 76   SDLLEMWKKMVIDETRKKN--GSIDSKSSVKAE-----------VSKSETVKVEK----- 117

Query: 768  ALRSENFVKYENNSDEDRIEIYDDVRIEGTASGKREAVVTLASKGKQNVDVIKSTQSMSS 589
             LR  + VK E  S  +       V++E     K   V  ++ +  Q   V + +QS   
Sbjct: 118  -LRKTSVVKVERASTSET------VKVEKMDQDKTVKVEKMSKQEIQTSSVKQPSQSPIG 170

Query: 588  APKLSSLIRCNDPVRDKIRELLLQALNKVPAEVEERQRGEVDACDPIRVAVCLESAMFEK 409
             PKL +L++CND +RDKIRELL +AL+KV +E +E  R EV+ACDPIRVAV +ES MFEK
Sbjct: 171  PPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESMMFEK 230

Query: 408  WGRSTGAQKVKYRSIIFNIGDSSNPDFRRKVLLGRVKPEKVLEMKPEEMASHERQRQNKQ 229
             GRS GAQK+KYRSI+FNI D +NPDFRRKVLLG V+PE+++ M PEEMAS +R+R+N Q
Sbjct: 231  LGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQ 290

Query: 228  IKDKALFECERGKQAEATTNSFKCGRCGKRKCTYYQLQTRSADEPMTTFVTCVNCNKRWK 49
            IK+K LF+CER  QA+ATT+ FKCGRC +RKCTYYQ+QTRSADEPMTT+VTCVNCN  WK
Sbjct: 291  IKEKVLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWK 350

Query: 48   F 46
            F
Sbjct: 351  F 351


>ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
            gi|194688540|gb|ACF78354.1| unknown [Zea mays]
            gi|194707892|gb|ACF88030.1| unknown [Zea mays]
          Length = 367

 Score =  363 bits (931), Expect = 6e-98
 Identities = 199/369 (53%), Positives = 249/369 (67%), Gaps = 10/369 (2%)
 Frame = -1

Query: 1122 AAENDAVEGLSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGKRLRHLTKHPRKKIQALASQ 943
            AA+  A +G SPE  RC+D L +L    VN D+LVSTQVGKRLR LTKHP   IQA+AS 
Sbjct: 15   AADATAGQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVASD 74

Query: 942  LIETWKNIVVEETLKKNRMGSLDNKVDLNSQPISAGSLEGIKVENVETLKVEKNESSAAL 763
            L   WK +V+EET KKN  GS +N+  ++S           KVE V  +KVEKN +SA++
Sbjct: 75   LFGYWKKVVLEETGKKN--GSSENEKSMDSSG---------KVEKVRPMKVEKNSASASM 123

Query: 762  RSENFVKYENNSDEDRIEIYDDVRIEGTAS-GKREAVVTL--ASKGKQNVDVIKSTQSMS 592
                  K E    +DR +  D+V++E TAS G R   V +   SK     D  K     +
Sbjct: 124  ------KVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPN 177

Query: 591  SAPKLSSLIRCNDPVRDKIRELLLQALNKVPAEVEERQRGEV-------DACDPIRVAVC 433
              PKL+SL++CNDP RDKIRELL +A  KVP E     R EV       DACDP RVAV 
Sbjct: 178  GPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVT 237

Query: 432  LESAMFEKWGRSTGAQKVKYRSIIFNIGDSSNPDFRRKVLLGRVKPEKVLEMKPEEMASH 253
            +ESA+FE++GRSTGA K KYRSI+FN+   +N DFRR+VL+G+V PE++ ++ P+EMAS 
Sbjct: 238  VESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 297

Query: 252  ERQRQNKQIKDKALFECERGKQAEATTNSFKCGRCGKRKCTYYQLQTRSADEPMTTFVTC 73
             R+++N QIK+KALF+CERG   +ATT+ FKCGRCG+RK TYYQLQTRSADEPMTTFVTC
Sbjct: 298  ARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTC 357

Query: 72   VNCNKRWKF 46
            VNCN  WKF
Sbjct: 358  VNCNNHWKF 366


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis
            sativus]
          Length = 369

 Score =  358 bits (920), Expect = 1e-96
 Identities = 195/367 (53%), Positives = 246/367 (67%), Gaps = 6/367 (1%)
 Frame = -1

Query: 1128 AAAAENDAVEGLSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGKRLRHLTKHPRKKIQALA 949
            AAA  ND       EE RC+D L+QL+K PV Y +LVSTQVGKRLRHLTKHP+KKIQ  A
Sbjct: 19   AAAPSNDG----GAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHA 74

Query: 948  SQLIETWKNIVVEETLKKNRMGSLDNKVDLNSQPISAGSLEGIKVENVE---TLKVE--- 787
            S LIE WK IV++ET K  + G+  +K   +S  I + S E +KVE  +   ++KVE   
Sbjct: 75   SDLIEMWKEIVIKETNKNKKNGNASSK---DSPKIGSPSAESVKVEKFQKSSSMKVERVS 131

Query: 786  KNESSAALRSENFVKYENNSDEDRIEIYDDVRIEGTASGKREAVVTLASKGKQNVDVIKS 607
            K E      + + VKY  +  E  +   + V++E T S  +   V    K        K 
Sbjct: 132  KVEQFDRNGATSSVKYSKS--ESVVSERNSVKVEKTDSMVKVERVVKEEK--------KP 181

Query: 606  TQSMSSAPKLSSLIRCNDPVRDKIRELLLQALNKVPAEVEERQRGEVDACDPIRVAVCLE 427
            +   ++ PKL+S+I+  D  RDKIRELL +A +KVP E +E    EV+A DPIRVAV +E
Sbjct: 182  SSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVE 241

Query: 426  SAMFEKWGRSTGAQKVKYRSIIFNIGDSSNPDFRRKVLLGRVKPEKVLEMKPEEMASHER 247
            S MFE WG STGAQK KYRSI+FN+ D  NPDFRRKVLLG +KPE+++ M   +MAS +R
Sbjct: 242  SVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQR 301

Query: 246  QRQNKQIKDKALFECERGKQAEATTNSFKCGRCGKRKCTYYQLQTRSADEPMTTFVTCVN 67
            +R+N++I  KALF+CERG   +ATT+ FKCGRCG+RK TYYQLQTRSADEPMTTFVTCVN
Sbjct: 302  KRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVN 361

Query: 66   CNKRWKF 46
            CN  WKF
Sbjct: 362  CNNHWKF 368