BLASTX nr result

ID: Cnidium21_contig00010548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010548
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   568   e-160
ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|2...   559   e-157
ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   534   e-149
ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   533   e-149
ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arab...   530   e-148

>ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis vinifera]
            gi|297733638|emb|CBI14885.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  568 bits (1465), Expect = e-160
 Identities = 273/370 (73%), Positives = 309/370 (83%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1321 MKRFFKPVEKEGSSKKPTIHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTKFLTWN 1142
            MKR+F+P+ K+GSSKKP++                                EP KFLTWN
Sbjct: 1    MKRYFQPIGKDGSSKKPSLSK--------------EDGDENTDQVSEEEKKEPLKFLTWN 46

Query: 1141 ANSFLLRVKNNWPEFTKLLQESDPDVIAIQEVRLPAAGTKGNPKNPRELKDDTSSSREEK 962
            ANSFL+RVKNNWPEFTK + + DPDVIA+QEVR+PAAG+KG PKN  ELKDDTSSSREEK
Sbjct: 47   ANSFLIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGELKDDTSSSREEK 106

Query: 961  QILMRAISNSPLKDYNFWWSLSDTKYAGTALFVKKCFNPK-VSFSLNQTASKHEPDGRVI 785
            +ILM A+S  P  +Y  WWSL+D+KYAGTALFVKKCF PK VSFS++Q ASKHEP+GRVI
Sbjct: 107  KILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKASKHEPEGRVI 166

Query: 784  LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLDFVSQTLDKPLIWCGDLNVSHEE 605
            LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRML+FV Q+ DKPLIWCGDLNVSHEE
Sbjct: 167  LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLEFVVQSSDKPLIWCGDLNVSHEE 226

Query: 604  TDVSHPEFFSSAKLNGYIPPNKEDCGQPGFTLSERKRFGALLKQGKLLDAYRLLHENKDM 425
             DVSHPEFFS+AK NGY+PPNKEDCGQPGFTL+ER+RFG +LK+GKL+DAYRLLH+ KDM
Sbjct: 227  IDVSHPEFFSAAKHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYRLLHKEKDM 286

Query: 424  ERGFSWSGNPVGKYRGKRMRIDYFIVSDTLKDRIVACEMHGQGIELQGFYGSDHCPVSLE 245
            E GFSWSGNP+GKYRGKRMRIDYFIV + LKDRIVACE+HGQGIEL+GFYGSDHCPVSLE
Sbjct: 287  EGGFSWSGNPIGKYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGFYGSDHCPVSLE 346

Query: 244  LSETDTNSDQ 215
            LSET + S+Q
Sbjct: 347  LSETSSGSNQ 356


>ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  559 bits (1441), Expect = e-157
 Identities = 266/370 (71%), Positives = 307/370 (82%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1321 MKRFFKPVEKEGSSKKPTIHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTKFLTWN 1142
            MKRFFKP+EK+GS+KKPT+ +                              EP KF+TWN
Sbjct: 1    MKRFFKPIEKDGSAKKPTLST-----NQEDNEKKEASESEETNNNGNTMKKEPLKFITWN 55

Query: 1141 ANSFLLRVKNNWPEFTKLLQESDPDVIAIQEVRLPAAGTKGNPKNPRELKDDTSSSREEK 962
            ANS LLRVKNNWP F+K + + DPDVI IQEVR+PAAG+KG PKN  E+KDDT+SSREEK
Sbjct: 56   ANSLLLRVKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGSKGAPKNSGEIKDDTNSSREEK 115

Query: 961  QILMRAISNSPLKDYNFWWSLSDTKYAGTALFVKKCFNP-KVSFSLNQTASKHEPDGRVI 785
            +ILMRA+S+SP  +YN WWSL+D+KYAGTAL VKKCF P KVSF+L+QTASKHEPDGRVI
Sbjct: 116  KILMRALSSSPFGNYNVWWSLADSKYAGTALLVKKCFQPVKVSFALDQTASKHEPDGRVI 175

Query: 784  LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLDFVSQTLDKPLIWCGDLNVSHEE 605
            LAEF++FRLLNTY PNNGWK+EE SFQRRRKWDKRML+ V Q  DKPLIWCGDLNVSHEE
Sbjct: 176  LAEFKTFRLLNTYAPNNGWKEEEKSFQRRRKWDKRMLEVVVQLSDKPLIWCGDLNVSHEE 235

Query: 604  TDVSHPEFFSSAKLNGYIPPNKEDCGQPGFTLSERKRFGALLKQGKLLDAYRLLHENKDM 425
             DVSHPEFFS+AK+NGY+PPNKEDCGQPGFTLSERKRFGA+LK+GKL+DAYR LH+ +DM
Sbjct: 236  IDVSHPEFFSAAKVNGYVPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRFLHKERDM 295

Query: 424  ERGFSWSGNPVGKYRGKRMRIDYFIVSDTLKDRIVACEMHGQGIELQGFYGSDHCPVSLE 245
            ERGFSWSGNP+GKYRGKRMRID+FIVS+ LKDRI+ CEMHG GIEL+GFYGSDHCPVSLE
Sbjct: 296  ERGFSWSGNPIGKYRGKRMRIDFFIVSEKLKDRIIQCEMHGHGIELEGFYGSDHCPVSLE 355

Query: 244  LSETDTNSDQ 215
            LS    +S++
Sbjct: 356  LSPASPDSNE 365


>ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
            lyase-like [Cucumis sativus]
          Length = 361

 Score =  534 bits (1375), Expect = e-149
 Identities = 258/366 (70%), Positives = 297/366 (81%), Gaps = 1/366 (0%)
 Frame = -2

Query: 1321 MKRFFKPVEKEGSSKKPTIHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTKFLTWN 1142
            MKRFFKP+EKEGSSKK  +                                EP KF+TWN
Sbjct: 1    MKRFFKPIEKEGSSKKVALSP------------SLKDGDDGDSEASVPDKKEPLKFVTWN 48

Query: 1141 ANSFLLRVKNNWPEFTKLLQESDPDVIAIQEVRLPAAGTKGNPKNPRELKDDTSSSREEK 962
            ANS LLRVKN+W EFTK +   DPD IAIQEVR+PAAG+KG  KN  ELKDDT++SREEK
Sbjct: 49   ANSLLLRVKNDWSEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEK 108

Query: 961  QILMRAISNSPLKDYNFWWSLSDTKYAGTALFVKKCFNPK-VSFSLNQTASKHEPDGRVI 785
            Q+LMRA+S+ P  +Y  WWSLSD+KYAGTALF+KKCF PK V F+L++ ASKHE DGRVI
Sbjct: 109  QMLMRALSSPPFANYRVWWSLSDSKYAGTALFIKKCFQPKKVXFNLDRIASKHEVDGRVI 168

Query: 784  LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLDFVSQTLDKPLIWCGDLNVSHEE 605
            LAEFE+FRLLNTY PNNGWK+EE SF+RRRKWDKRML+FV Q+ DKPLIWCGDLNVSHEE
Sbjct: 169  LAEFETFRLLNTYSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEE 228

Query: 604  TDVSHPEFFSSAKLNGYIPPNKEDCGQPGFTLSERKRFGALLKQGKLLDAYRLLHENKDM 425
             DVSHP+FFS+AKLNGYIPPNKEDCGQPGFTL+ER RF A+LK+GKL+DA+R LH+ KDM
Sbjct: 229  IDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDM 288

Query: 424  ERGFSWSGNPVGKYRGKRMRIDYFIVSDTLKDRIVACEMHGQGIELQGFYGSDHCPVSLE 245
            ERGFSWSG+P+GKYRGKRMRIDYF+VS++L  RIV+CEMHGQGIEL+GFYGSDHCPVSLE
Sbjct: 289  ERGFSWSGHPIGKYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLE 348

Query: 244  LSETDT 227
            LSE  +
Sbjct: 349  LSEASS 354


>ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Cucumis
            sativus]
          Length = 361

 Score =  533 bits (1374), Expect = e-149
 Identities = 258/366 (70%), Positives = 297/366 (81%), Gaps = 1/366 (0%)
 Frame = -2

Query: 1321 MKRFFKPVEKEGSSKKPTIHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTKFLTWN 1142
            MKRFFKP+EKEGSSKK  +                                EP KF+TWN
Sbjct: 1    MKRFFKPIEKEGSSKKVALSP------------SLKDGDDGDSEASVPDKKEPLKFVTWN 48

Query: 1141 ANSFLLRVKNNWPEFTKLLQESDPDVIAIQEVRLPAAGTKGNPKNPRELKDDTSSSREEK 962
            ANS LLRVKN+W EFTK +   DPD IAIQEVR+PAAG+KG  KN  ELKDDT++SREEK
Sbjct: 49   ANSLLLRVKNDWSEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEK 108

Query: 961  QILMRAISNSPLKDYNFWWSLSDTKYAGTALFVKKCFNPK-VSFSLNQTASKHEPDGRVI 785
            Q+LMRA+S+ P  +Y  WWSLSD+KYAGTALF+KKCF PK V F+L++ ASKHE DGRVI
Sbjct: 109  QMLMRALSSPPFANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVI 168

Query: 784  LAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLDFVSQTLDKPLIWCGDLNVSHEE 605
            LAEFE+FRLLNTY PNNGWK+EE SF+RRRKWDKRML+FV Q+ DKPLIWCGDLNVSHEE
Sbjct: 169  LAEFETFRLLNTYSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEE 228

Query: 604  TDVSHPEFFSSAKLNGYIPPNKEDCGQPGFTLSERKRFGALLKQGKLLDAYRLLHENKDM 425
             DVSHP+FFS+AKLNGYIPPNKEDCGQPGFTL+ER RF A+LK+GKL+DA+R LH+ KDM
Sbjct: 229  IDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDM 288

Query: 424  ERGFSWSGNPVGKYRGKRMRIDYFIVSDTLKDRIVACEMHGQGIELQGFYGSDHCPVSLE 245
            ERGFSWSG+P+GKYRGKRMRIDYF+VS++L  RIV+CEMHGQGIEL+GFYGSDHCPVSLE
Sbjct: 289  ERGFSWSGHPIGKYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLE 348

Query: 244  LSETDT 227
            LSE  +
Sbjct: 349  LSEASS 354


>ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp.
            lyrata] gi|297321739|gb|EFH52160.1| hypothetical protein
            ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata]
          Length = 684

 Score =  530 bits (1364), Expect = e-148
 Identities = 252/375 (67%), Positives = 302/375 (80%), Gaps = 3/375 (0%)
 Frame = -2

Query: 1330 AERMKRFFKPVEKEGSS--KKPTIHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTK 1157
            A+ MKRFFKP+EKEGS+  KKP +                                EP+K
Sbjct: 318  AKAMKRFFKPIEKEGSTAAKKPCLSP-------------EKREGDGDGVEEEKNQKEPSK 364

Query: 1156 FLTWNANSFLLRVKNNWPEFTKLLQESDPDVIAIQEVRLPAAGTKGNPKNPRELKDDTSS 977
            F+TWNANSFLLRVKN+W +F+K + + DPDVIA+QEVR+PAAG KG PKNP EL DDT  
Sbjct: 365  FVTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGGKGKPKNPEELSDDTKV 424

Query: 976  SREEKQILMRAISNSPLKDYNFWWSLSDTKYAGTALFVKKCFNPK-VSFSLNQTASKHEP 800
             REEKQIL RA+S+ P  +Y  WWSL+D+KYAGTAL VKKCF PK V F+L++ ASKHEP
Sbjct: 425  LREEKQILTRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKKVYFNLDKLASKHEP 484

Query: 799  DGRVILAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLDFVSQTLDKPLIWCGDLN 620
            DGRVILAEFE+FRLLNTY PNNGWK+EE SFQRRRKWDKR+++F+++T DKPLIWCGDLN
Sbjct: 485  DGRVILAEFETFRLLNTYSPNNGWKEEENSFQRRRKWDKRIVEFLNKTSDKPLIWCGDLN 544

Query: 619  VSHEETDVSHPEFFSSAKLNGYIPPNKEDCGQPGFTLSERKRFGALLKQGKLLDAYRLLH 440
            VSHEE DVSHPEFF++AKLNGY+PPNKEDCGQPGFT SER+RFG  +K+G L+DAYR LH
Sbjct: 545  VSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERRRFGETMKEGMLVDAYRYLH 604

Query: 439  ENKDMERGFSWSGNPVGKYRGKRMRIDYFIVSDTLKDRIVACEMHGQGIELQGFYGSDHC 260
            + +DME GFSWSGNP+GKYRGKRMRIDYF+VS+ LKDRIV+C+MHG+GIEL+GFYGSDHC
Sbjct: 605  KEQDMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFYGSDHC 664

Query: 259  PVSLELSETDTNSDQ 215
            PV+LELS+  + ++Q
Sbjct: 665  PVTLELSKPSSETEQ 679


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