BLASTX nr result

ID: Cnidium21_contig00010531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010531
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, c...   102   4e-20
emb|CBI35324.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002274963.1| PREDICTED: ATP synthase delta chain, chlorop...    88   8e-16
gb|AAA34024.1| ATP synthase delta subunit precursor [Spinacia ol...    86   4e-15
ref|XP_002327324.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, chloroplastic; AltName:
           Full=F-ATPase delta chain; Flags: Precursor
           gi|19787|emb|CAA45153.1| chloroplast ATP synthase (delta
           subunit) [Nicotiana tabacum]
          Length = 248

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
 Frame = +3

Query: 12  PCAQYTPCKTHTLSFSGGLRLPKLTLNVKSRG---RGGGA---RMSDSVASSYANALADV 173
           P  Q     T  LSFSGGL+LPKLT+ ++S     RGGGA   +M  S A SYANALAD+
Sbjct: 17  PPTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGSKMVASAAGSYANALADI 76

Query: 174 AQSNGTLEATAADLEKVNQLFSEEAVFKYFINPTVSVQDKNNLVD 308
           A+SNGTLE T ADLEK+ ++  +EAVF +F++P V  + K  LVD
Sbjct: 77  AKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVD 121


>emb|CBI35324.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = +3

Query: 6   RSP--CAQYTPCKTHTLSFSGGLRLPKLTLNVKSRGRGGG--ARMSDSVASSYANALADV 173
           RSP   A+    K   LSFSG     +LT  V  + R G   ARMS + A SYA ALADV
Sbjct: 14  RSPPSAAKSLSNKPLNLSFSGNFPSFRLTNKVAGKSRSGASSARMSATAAGSYATALADV 73

Query: 174 AQSNGTLEATAADLEKVNQLFSEEAVFKYFINPTVSVQDKNNLVDAYTK 320
           A+SNGTL+ TA D+EK+ ++ S+E V  +F NPT+ ++ K N++D   K
Sbjct: 74  AKSNGTLDTTAEDVEKIEKVLSDEQVLGFFCNPTIDIEKKRNVLDEIAK 122


>ref|XP_002274963.1| PREDICTED: ATP synthase delta chain, chloroplastic [Vitis vinifera]
          Length = 244

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = +3

Query: 6   RSP--CAQYTPCKTHTLSFSGGLRLPKLTLNVKSRGRGGG--ARMSDSVASSYANALADV 173
           RSP   A+    K   LSFSG     +LT  V  + R G   ARMS + A SYA ALADV
Sbjct: 14  RSPPSAAKSLSNKPLNLSFSGNFPSFRLTNKVAGKSRSGASSARMSATAAGSYATALADV 73

Query: 174 AQSNGTLEATAADLEKVNQLFSEEAVFKYFINPTVSVQDKNNLVDAYTK 320
           A+SNGTL+ TA D+EK+ ++ S+E V  +F NPT+ ++ K N++D   K
Sbjct: 74  AKSNGTLDTTAEDVEKIEKVLSDEQVLGFFCNPTIDIEKKRNVLDEIAK 122


>gb|AAA34024.1| ATP synthase delta subunit precursor [Spinacia oleracea]
           gi|226262|prf||1503275A ATP synthase delta
          Length = 257

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/103 (48%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
 Frame = +3

Query: 27  TPCKTHTLSFSGG------LRLPKLT---LNVKSRGRGGGARMSDSVASSYANALADVAQ 179
           +P K  +LSFS        LRL  LT   L  K RG   G RM DS AS YA+ALADVA 
Sbjct: 28  SPPKPFSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVAD 87

Query: 180 SNGTLEATAADLEKVNQLFSEEAVFKYFINPTVSVQDKNNLVD 308
             GTLEAT +D+EK+ ++FSEE V+ +F NP +S+ +K +++D
Sbjct: 88  VTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLD 130


>ref|XP_002327324.1| predicted protein [Populus trichocarpa] gi|222835694|gb|EEE74129.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = +3

Query: 24  YTPCKTHTLSFSGGLRLPKLTLNVKSRGRGG---GARMSDSVASSYANALADVAQSNGTL 194
           +T  K   LSFS       L+     R RGG   G +MS + A SYA ALADVA+SN TL
Sbjct: 26  FTSPKPLNLSFSATFPSLNLSTTTTLRLRGGSALGTKMSAAAAGSYAAALADVAKSNNTL 85

Query: 195 EATAADLEKVNQLFSEEAVFKYFINPTVSVQDKNNLVDAYTK 320
           +AT++D+ KV++LFS+ AV+ +F NPTV  + K  +VD + K
Sbjct: 86  DATSSDMGKVDKLFSDTAVYDFFANPTVDTEKKRQMVDEFAK 127


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