BLASTX nr result

ID: Cnidium21_contig00010522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010522
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...    62   2e-07
emb|CBI16571.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...    59   2e-06
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    59   2e-06
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    59   2e-06

>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -3

Query: 932  GTTAQVPS-GGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGQP 807
            G TAQ P+  GFG  AQ GAGQQALGSVLG+FGQSRQ GAG P
Sbjct: 1550 GITAQAPARSGFGQLAQIGAGQQALGSVLGAFGQSRQFGAGLP 1592


>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -3

Query: 932  GTTAQVPS-GGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGQP 807
            G TAQ P+  GFG  AQ GAGQQALGSVLG+FGQSRQ GAG P
Sbjct: 1539 GITAQAPARSGFGQLAQIGAGQQALGSVLGAFGQSRQFGAGLP 1581


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1819

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 929  TTAQVPS-GGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGQP 807
            T +Q P+  GFG  +Q G GQQALGSVLGSFGQSRQ+GAG P
Sbjct: 1627 TPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLP 1668


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 929  TTAQVPS-GGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGQP 807
            T +Q P+  GFG  +Q G GQQALGSVLGSFGQSRQ+GAG P
Sbjct: 1624 TPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLP 1665


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 929  TTAQVPS-GGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGQP 807
            T +Q P+  GFG  +Q G GQQALGSVLGSFGQSRQ+GAG P
Sbjct: 1634 TPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLP 1675


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