BLASTX nr result

ID: Cnidium21_contig00010509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010509
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucum...   560   e-157
ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricin...   556   e-156
ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glyci...   555   e-156
ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glyci...   555   e-156
ref|XP_002322192.1| histone deacetylase [Populus trichocarpa] gi...   548   e-154

>ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
           gi|449523768|ref|XP_004168895.1| PREDICTED: histone
           deacetylase 6-like [Cucumis sativus]
          Length = 465

 Score =  560 bits (1444), Expect = e-157
 Identities = 267/308 (86%), Positives = 284/308 (92%)
 Frame = +2

Query: 41  MANDDFSGASLPTPGSDASKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYNLH 220
           M++D   GASLP+ G D  KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY LH
Sbjct: 1   MSDDIHGGASLPS-GPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLH 59

Query: 221 RKMEIICPFPAGPTDIGKFHSPDYVDFLASVTPESLHDHGHARHLKRFNVGEDCPVFDGM 400
           R+MEI  P+PAGP DI +FHS DYVDFLASV+PE+L DH  +RHLKRFNVGEDCPVFDG+
Sbjct: 60  RRMEINRPYPAGPEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGL 119

Query: 401 FSFCQASAGGSIGAAVKLNLQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKR 580
           F FCQASAGGSIGAAVKLN  DADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLK 
Sbjct: 120 FGFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKY 179

Query: 581 HRRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGHGQGKNYALNV 760
           H+RVLYIDID+HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVG G GKNYALNV
Sbjct: 180 HKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGTGKNYALNV 239

Query: 761 PLNDGIDDDSFRELFRPVIRKVMEAYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLR 940
           PLNDG+DDDSFR LFRP+I+KVME YQP+AVVLQCGADSL+GDRLGCFNLSVKGHADCLR
Sbjct: 240 PLNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR 299

Query: 941 FLRSFNVP 964
           FLRSFNVP
Sbjct: 300 FLRSFNVP 307


>ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 468

 Score =  556 bits (1433), Expect = e-156
 Identities = 262/305 (85%), Positives = 280/305 (91%)
 Frame = +2

Query: 50  DDFSGASLPTPGSDASKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYNLHRKM 229
           D+  GASLP+ G+DA KRRVTYFYEPTIG+YYYGQGHPMKPHRIRMAHNLIVHY+LHR+M
Sbjct: 3   DETGGASLPSTGTDAKKRRVTYFYEPTIGNYYYGQGHPMKPHRIRMAHNLIVHYSLHRRM 62

Query: 230 EIICPFPAGPTDIGKFHSPDYVDFLASVTPESLHDHGHARHLKRFNVGEDCPVFDGMFSF 409
           EI  PFPA   DI KFHS DYVDFL+SV+PESL D  H RHLKRFNVGEDCPVFDG+F F
Sbjct: 63  EINRPFPASTIDIRKFHSDDYVDFLSSVSPESLADPAHNRHLKRFNVGEDCPVFDGLFGF 122

Query: 410 CQASAGGSIGAAVKLNLQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKRHRR 589
           CQASAGGS+GAAVKLN  DADIA+NWAGGLHHAKKSEASGFCYVNDIVLGILELLK HRR
Sbjct: 123 CQASAGGSMGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRR 182

Query: 590 VLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGHGQGKNYALNVPLN 769
           VLY+DID+HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKD G GQGKNYALN+PLN
Sbjct: 183 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGAGQGKNYALNIPLN 242

Query: 770 DGIDDDSFRELFRPVIRKVMEAYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLR 949
           DG+DD SFR LFRP+I+KVME YQP+AVVLQCGADSL GDRLGCFNLSVKGHADCLRFLR
Sbjct: 243 DGMDDVSFRALFRPIIQKVMEVYQPDAVVLQCGADSLTGDRLGCFNLSVKGHADCLRFLR 302

Query: 950 SFNVP 964
           SFNVP
Sbjct: 303 SFNVP 307


>ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score =  555 bits (1431), Expect = e-156
 Identities = 259/301 (86%), Positives = 280/301 (93%)
 Frame = +2

Query: 62  GASLPTPGSDASKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYNLHRKMEIIC 241
           GASLP+ GSDA KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY+LHR+MEI  
Sbjct: 13  GASLPSSGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINR 72

Query: 242 PFPAGPTDIGKFHSPDYVDFLASVTPESLHDHGHARHLKRFNVGEDCPVFDGMFSFCQAS 421
           PFPA P DI +FHS DYVDFL+SV+PE+L D   +RHLKRFNVGEDCPVFDG+F FCQAS
Sbjct: 73  PFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQAS 132

Query: 422 AGGSIGAAVKLNLQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKRHRRVLYI 601
           AGGS+GAAVKLN  DADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLK HRRVLY+
Sbjct: 133 AGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKAHRRVLYV 192

Query: 602 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGHGQGKNYALNVPLNDGID 781
           DID+HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGH+KD+G G GKNYA+NVPLNDG+D
Sbjct: 193 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVGSGKNYAVNVPLNDGMD 252

Query: 782 DDSFRELFRPVIRKVMEAYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNV 961
           D+SFR LFR +I+KVME YQPEAVVLQCGADSL+GDRLGCFNLSV+GHADCLRFLRSFNV
Sbjct: 253 DESFRSLFRSIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNV 312

Query: 962 P 964
           P
Sbjct: 313 P 313


>ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score =  555 bits (1429), Expect = e-156
 Identities = 259/301 (86%), Positives = 280/301 (93%)
 Frame = +2

Query: 62  GASLPTPGSDASKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYNLHRKMEIIC 241
           GASLP+ GSDA KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY+LHR+MEI  
Sbjct: 17  GASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINR 76

Query: 242 PFPAGPTDIGKFHSPDYVDFLASVTPESLHDHGHARHLKRFNVGEDCPVFDGMFSFCQAS 421
           PFPA P DI +FHS DYVDFL+SV+PE+L D   +RHLKRFNVGEDCPVFDG+F FCQAS
Sbjct: 77  PFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQAS 136

Query: 422 AGGSIGAAVKLNLQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKRHRRVLYI 601
           AGGS+GAAVKLN  DADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLK HRRVLY+
Sbjct: 137 AGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYV 196

Query: 602 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGHGQGKNYALNVPLNDGID 781
           DID+HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGH+KD+G G GKNYA+NVPLNDG+D
Sbjct: 197 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVGSGKNYAVNVPLNDGMD 256

Query: 782 DDSFRELFRPVIRKVMEAYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNV 961
           D+SFR LFR +I+KVME YQPEAVVLQCGADSL+GDRLGCFNLSV+GHADCLRFLRSFNV
Sbjct: 257 DESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNV 316

Query: 962 P 964
           P
Sbjct: 317 P 317


>ref|XP_002322192.1| histone deacetylase [Populus trichocarpa]
           gi|222869188|gb|EEF06319.1| histone deacetylase [Populus
           trichocarpa]
          Length = 435

 Score =  548 bits (1413), Expect = e-154
 Identities = 257/305 (84%), Positives = 281/305 (92%)
 Frame = +2

Query: 50  DDFSGASLPTPGSDASKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYNLHRKM 229
           D   GASLP+ G+DA KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY LHR+M
Sbjct: 3   DITGGASLPSTGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYALHRRM 62

Query: 230 EIICPFPAGPTDIGKFHSPDYVDFLASVTPESLHDHGHARHLKRFNVGEDCPVFDGMFSF 409
           EI  PFPAGPTDI KFHS +YV+FL+SV+P+S+ D    R LKRFNVGEDCPVFDG+F F
Sbjct: 63  EINRPFPAGPTDIRKFHSDEYVEFLSSVSPQSVGDPAFGRQLKRFNVGEDCPVFDGLFGF 122

Query: 410 CQASAGGSIGAAVKLNLQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKRHRR 589
           CQASAGGSIGAAVKLN  DADIA+NWAGGLHHAKKSEASGFCYVNDIVLGILELLK HRR
Sbjct: 123 CQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRR 182

Query: 590 VLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGHGQGKNYALNVPLN 769
           VLY+DID+HHGDGVEEAFYTTDRVMTVSFHK+GDFFPGTGHIKD G GQGK+YALN+PLN
Sbjct: 183 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGHIKDTGAGQGKSYALNIPLN 242

Query: 770 DGIDDDSFRELFRPVIRKVMEAYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLR 949
           DG+DD++FR LFRP+I+KVME YQP+AVVLQCGADSL+GDRLGCFNLSVKGHADCLRFLR
Sbjct: 243 DGMDDENFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR 302

Query: 950 SFNVP 964
           S+NVP
Sbjct: 303 SYNVP 307


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