BLASTX nr result

ID: Cnidium21_contig00010503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010503
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510949.1| protein binding protein, putative [Ricinus c...   272   8e-71
ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|2...   259   9e-67
ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...   258   2e-66
ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medi...   254   2e-65
ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...   254   3e-65

>ref|XP_002510949.1| protein binding protein, putative [Ricinus communis]
           gi|223550064|gb|EEF51551.1| protein binding protein,
           putative [Ricinus communis]
          Length = 585

 Score =  272 bits (696), Expect = 8e-71
 Identities = 134/226 (59%), Positives = 163/226 (72%)
 Frame = +3

Query: 258 MGVSYVTISLFSTVLSYAGVHCWTTLSPEKLILDGLISQSFVHSESVVQALESLLDSYTS 437
           MG  Y+ IS   T LS+ G+ CWT LS EKL  +GLIS++F++ E+  +ALE LL SY +
Sbjct: 1   MGAGYLAISAACTALSFVGLKCWTELSLEKLKSEGLISENFINPENANRALELLLGSYAT 60

Query: 438 XXXXXXXXXXXXXXXXXSFKTIFFAELHSSESRKLVERLVNYVIYKGTFLPLVVPPTIYQ 617
                            S KTIFFAEL+ SE+RKL+ERLVNYVIYKGTFLPLV+P TI+Q
Sbjct: 61  IALLASFVFNAFILLNLSLKTIFFAELYPSETRKLMERLVNYVIYKGTFLPLVIPATIFQ 120

Query: 618 GSLWTAWLVILCSLKMFQALARDRLDRLNASPSATPWTYFRVYSXXXXXXXXXXXWIRTC 797
             LW++WL +LCSLKMFQALARDRL+RLNASPSA PWTYFRVYS           WIR C
Sbjct: 121 AGLWSSWLTVLCSLKMFQALARDRLERLNASPSAMPWTYFRVYSVLLLVLSVDFFWIRLC 180

Query: 798 LMLYGTIVSSMFFLLFYEPLSILFETLQAIVVHGVQLLDIWLHNSS 935
            ++Y T+ +SMF LLFYEP SI FET+QA++VHG QLLDIW H+S+
Sbjct: 181 WLIYRTLDTSMFMLLFYEPFSIAFETMQAMLVHGFQLLDIWFHHSA 226


>ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|222871161|gb|EEF08292.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  259 bits (661), Expect = 9e-67
 Identities = 129/230 (56%), Positives = 163/230 (70%)
 Frame = +3

Query: 258 MGVSYVTISLFSTVLSYAGVHCWTTLSPEKLILDGLISQSFVHSESVVQALESLLDSYTS 437
           MGVSY+ IS   T LS+ G+  WT +S ++L  DGLI ++F++SE+V +ALE L  SY +
Sbjct: 1   MGVSYIAISAVCTALSFVGLQWWTEVSLDRLRSDGLIGENFINSENVNRALELLFSSYAT 60

Query: 438 XXXXXXXXXXXXXXXXXSFKTIFFAELHSSESRKLVERLVNYVIYKGTFLPLVVPPTIYQ 617
                            +  TIFF EL+SSE+RKLVERL+NY IYKGTFLPLV+PPTI Q
Sbjct: 61  I----------------ALLTIFFGELYSSETRKLVERLINYAIYKGTFLPLVIPPTISQ 104

Query: 618 GSLWTAWLVILCSLKMFQALARDRLDRLNASPSATPWTYFRVYSXXXXXXXXXXXWIRTC 797
             LW+ WL +LCSLKMFQALARDRL+RLNASPSATPWTY RVYS           WI+ C
Sbjct: 105 TGLWSIWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLLVLSVDFFWIQMC 164

Query: 798 LMLYGTIVSSMFFLLFYEPLSILFETLQAIVVHGVQLLDIWLHNSSKDNT 947
            ++Y +  SSMF LLF+EP SI FET+QA++VHG QLL+IW H+S+ ++T
Sbjct: 165 FVIYRSTGSSMFLLLFFEPFSIAFETMQAMLVHGFQLLEIWFHHSAGNST 214


>ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera]
           gi|296084203|emb|CBI24591.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  258 bits (659), Expect = 2e-66
 Identities = 130/225 (57%), Positives = 156/225 (69%)
 Frame = +3

Query: 258 MGVSYVTISLFSTVLSYAGVHCWTTLSPEKLILDGLISQSFVHSESVVQALESLLDSYTS 437
           MG SY+ +S   TV S+ G+  WT  S  +L  DGLIS +++HS +  + L+ LL S+ +
Sbjct: 1   MGASYLLVSAACTVFSFVGLQWWTEQSLHRLKSDGLISDNYIHSGNASRVLDLLLSSHAT 60

Query: 438 XXXXXXXXXXXXXXXXXSFKTIFFAELHSSESRKLVERLVNYVIYKGTFLPLVVPPTIYQ 617
                              KTIFFAEL+ SE+RKLV RL+NYVIYKGTFLPLVVP TI+Q
Sbjct: 61  IALLVNFALNIFVLLILCLKTIFFAELYPSETRKLVGRLINYVIYKGTFLPLVVPSTIFQ 120

Query: 618 GSLWTAWLVILCSLKMFQALARDRLDRLNASPSATPWTYFRVYSXXXXXXXXXXXWIRTC 797
             LW+ WL ILCSLKMFQALARDRL+RLNASPSATPWTYFRV+S           WI  C
Sbjct: 121 AGLWSMWLTILCSLKMFQALARDRLERLNASPSATPWTYFRVFSVLLLVLSVDLFWIWLC 180

Query: 798 LMLYGTIVSSMFFLLFYEPLSILFETLQAIVVHGVQLLDIWLHNS 932
           L++Y T+ S MF LLF+EP SI FETLQAIVVHG QL+DIWLH+S
Sbjct: 181 LVIYRTLSSPMFLLLFFEPWSIAFETLQAIVVHGFQLIDIWLHDS 225


>ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula]
           gi|355487192|gb|AES68395.1| E3 ubiquitin-protein ligase
           synoviolin [Medicago truncatula]
          Length = 589

 Score =  254 bits (649), Expect = 2e-65
 Identities = 130/226 (57%), Positives = 156/226 (69%)
 Frame = +3

Query: 258 MGVSYVTISLFSTVLSYAGVHCWTTLSPEKLILDGLISQSFVHSESVVQALESLLDSYTS 437
           M + ++ IS  STVLS+ G+   T LS EKL  DGLI  + +H ++V   +E  L  YT+
Sbjct: 1   MALKFIAISAVSTVLSFVGLQFCTDLSLEKLKSDGLIGWNSIHLDNVDHDIELPLGLYTT 60

Query: 438 XXXXXXXXXXXXXXXXXSFKTIFFAELHSSESRKLVERLVNYVIYKGTFLPLVVPPTIYQ 617
                              K +FF+EL+ SE+RKL+ERLVNYVIYKGTFLPLVV PT+YQ
Sbjct: 61  IVLLTNCMINVFVLLNLCLKAMFFSELYPSETRKLIERLVNYVIYKGTFLPLVVLPTLYQ 120

Query: 618 GSLWTAWLVILCSLKMFQALARDRLDRLNASPSATPWTYFRVYSXXXXXXXXXXXWIRTC 797
             LW+ WL +LCSLKMFQALARDRL+RLNASPSATPWTY RVYS           WIR C
Sbjct: 121 AGLWSTWLAVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLFIFLVDVLWIRLC 180

Query: 798 LMLYGTIVSSMFFLLFYEPLSILFETLQAIVVHGVQLLDIWLHNSS 935
           L +Y T  SSMF LLF+EPLSI FETLQAI+VHG QLLDIW+H+S+
Sbjct: 181 LEIYSTHGSSMFLLLFFEPLSIAFETLQAILVHGFQLLDIWIHHSA 226


>ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
          Length = 586

 Score =  254 bits (648), Expect = 3e-65
 Identities = 127/233 (54%), Positives = 159/233 (68%), Gaps = 1/233 (0%)
 Frame = +3

Query: 258 MGVSYVTISLFSTVLSYAGVHCWTTLSPEKLILDGLISQSFVHSESVVQALESLLDSYTS 437
           M +  + IS+ STVLS+ G+   T LS +KL  DGL+  + +H ++  Q +E  L  YT+
Sbjct: 1   MALRVIAISVVSTVLSFVGLQFCTDLSLDKLTSDGLVGWNLIHLDNASQDIELPLGLYTT 60

Query: 438 XXXXXXXXXXXXXXXXXSFKTIFFAELHSSESRKLVERLVNYVIYKGTFLPLVVPPTIYQ 617
                              K +FF EL++SE+RKLVERL+NYVIYKG FLPL+VPPTIYQ
Sbjct: 61  IGLLVNCMINVFILLNLCLKAVFFTELYASETRKLVERLINYVIYKGMFLPLIVPPTIYQ 120

Query: 618 GSLWTAWLVILCSLKMFQALARDRLDRLNASPSATPWTYFRVYSXXXXXXXXXXXWIRTC 797
             LW+ WL +LCSLKMFQALARDRL+RLNASP+ATPWTY RVYS           WIR C
Sbjct: 121 AGLWSTWLTVLCSLKMFQALARDRLERLNASPAATPWTYLRVYSALLFVFMVDVLWIRFC 180

Query: 798 LMLYGTIVSSMFFLLFYEPLSILFETLQAIVVHGVQLLDIWLHNSS-KDNTYR 953
           L +Y T  SSM+ LLF+EP SI+FETLQAI++HG QLLDIWLH+S+   N +R
Sbjct: 181 LTIYRTHGSSMYLLLFFEPFSIVFETLQAILIHGFQLLDIWLHHSACNSNDFR 233


Top