BLASTX nr result

ID: Cnidium21_contig00010498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010498
         (2197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3...   346   1e-92
ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3...   343   8e-92
ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putativ...   342   3e-91
sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation fact...   332   3e-88
ref|XP_002310663.1| predicted protein [Populus trichocarpa] gi|2...   331   4e-88

>ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Vitis vinifera]
          Length = 412

 Score =  346 bits (888), Expect = 1e-92
 Identities = 177/216 (81%), Positives = 195/216 (90%), Gaps = 2/216 (0%)
 Frame = +2

Query: 116 MSAIGGPSVVPANRA--RRSTMDDEKLVFETSQGVEPILSFDHMGIKDDLLRGIYSYGFD 289
           M+A    SVVPANR   R   +DDEKLVFET++GVEPI+SFD MGIKDDLLRGIY+YGF+
Sbjct: 1   MAAAATASVVPANRGGRRNGAVDDEKLVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFE 60

Query: 290 KPSAIQQRAVHPIISGRDVIAQAQSGTGKTSMIALTVCQMVNTSSTEVQALILSPTRELA 469
           KPSAIQQRAV PII GRDVIAQAQSGTGKTSMIALTVCQMV+TS+ EVQALILSPTRELA
Sbjct: 61  KPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQMVDTSNREVQALILSPTRELA 120

Query: 470 AQTEQTIRAIGNHLNIKAHACIGGKSVGEDIRKLESGVQVVSGTPGRVCDMIKRRSLRTR 649
           +QTE+ I AIG+ +NI+AHACIGGKSVGEDIRKLE GV +VSGTPGRVCDMIKRR+LRTR
Sbjct: 121 SQTEKVILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHIVSGTPGRVCDMIKRRTLRTR 180

Query: 650 DIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQPI 757
            IKLL+LDESDEMLSRGFKDQIYDVYRYLPPELQ +
Sbjct: 181 AIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVV 216


>ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Cucumis sativus]
           gi|449508400|ref|XP_004163303.1| PREDICTED: eukaryotic
           initiation factor 4A-3-like [Cucumis sativus]
          Length = 410

 Score =  343 bits (881), Expect = 8e-92
 Identities = 174/214 (81%), Positives = 193/214 (90%)
 Frame = +2

Query: 116 MSAIGGPSVVPANRARRSTMDDEKLVFETSQGVEPILSFDHMGIKDDLLRGIYSYGFDKP 295
           M+A    SVVP NR R  +  ++KL FET++GVEPIL+FD MGIKDDLLRGIY+YGF+KP
Sbjct: 1   MAAAATTSVVPPNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 296 SAIQQRAVHPIISGRDVIAQAQSGTGKTSMIALTVCQMVNTSSTEVQALILSPTRELAAQ 475
           SAIQQRAV PII GRDVIAQAQSGTGKTSMIALTVCQMV+T+S EVQALILSPTRELA Q
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 476 TEQTIRAIGNHLNIKAHACIGGKSVGEDIRKLESGVQVVSGTPGRVCDMIKRRSLRTRDI 655
           TE+ I AIG+++NI+AHACIGGKSVGEDIRKLE GVQVVSGTPGRVCDMIKRR+LRTR I
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 656 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQPI 757
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQ +
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVV 214


>ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539871|gb|EEF41450.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 407

 Score =  342 bits (876), Expect = 3e-91
 Identities = 174/208 (83%), Positives = 192/208 (92%), Gaps = 1/208 (0%)
 Frame = +2

Query: 137 SVVPANR-ARRSTMDDEKLVFETSQGVEPILSFDHMGIKDDLLRGIYSYGFDKPSAIQQR 313
           SVVPA R ARR+  +DEKLVFET++G+EPI SFD MGIK+DLLRGIY+YGF+KPSAIQQR
Sbjct: 4   SVVPAGRSARRAAAEDEKLVFETTEGIEPITSFDEMGIKNDLLRGIYAYGFEKPSAIQQR 63

Query: 314 AVHPIISGRDVIAQAQSGTGKTSMIALTVCQMVNTSSTEVQALILSPTRELAAQTEQTIR 493
           AV PII GRDVIAQAQSGTGKTSMIALT CQ+V+TSS EVQALILSPTRELAAQTE+ I 
Sbjct: 64  AVMPIIKGRDVIAQAQSGTGKTSMIALTACQLVDTSSREVQALILSPTRELAAQTEKVIL 123

Query: 494 AIGNHLNIKAHACIGGKSVGEDIRKLESGVQVVSGTPGRVCDMIKRRSLRTRDIKLLILD 673
           AIG+++NI+AHACIGGKSVGEDIRKLE GV VVSGTPGRVCDMIKRR+LRTR IKLL+LD
Sbjct: 124 AIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLD 183

Query: 674 ESDEMLSRGFKDQIYDVYRYLPPELQPI 757
           ESDEMLSRGFKDQIYDVYRYLPPELQ +
Sbjct: 184 ESDEMLSRGFKDQIYDVYRYLPPELQVV 211


>sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation factor 4A-3; Short=eIF-4A-3;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3
           gi|19699|emb|CAA43514.1| nicotiana eukaryotic
           translation initiation factor 4A [Nicotiana
           plumbaginifolia]
          Length = 391

 Score =  332 bits (850), Expect = 3e-88
 Identities = 166/195 (85%), Positives = 184/195 (94%)
 Frame = +2

Query: 173 MDDEKLVFETSQGVEPILSFDHMGIKDDLLRGIYSYGFDKPSAIQQRAVHPIISGRDVIA 352
           M++++LVFETS+GVEPI SF  MGIKDDLLRG+Y YGF+KPSAIQQRAV PIISGRDVIA
Sbjct: 1   MEEDRLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIA 60

Query: 353 QAQSGTGKTSMIALTVCQMVNTSSTEVQALILSPTRELAAQTEQTIRAIGNHLNIKAHAC 532
           QAQSGTGKTSMIALTVCQ+V+T S+EVQALILSPTRELAAQTE+ I AIG+++N++AHAC
Sbjct: 61  QAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHAC 120

Query: 533 IGGKSVGEDIRKLESGVQVVSGTPGRVCDMIKRRSLRTRDIKLLILDESDEMLSRGFKDQ 712
           IGGKSVGEDIRKLE GVQVVSGTPGRVCDMIKRR+LRTR IKLLILDESDEMLSRGFKDQ
Sbjct: 121 IGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQ 180

Query: 713 IYDVYRYLPPELQPI 757
           IYDVYRYLPPELQ +
Sbjct: 181 IYDVYRYLPPELQVV 195


>ref|XP_002310663.1| predicted protein [Populus trichocarpa] gi|222853566|gb|EEE91113.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  331 bits (849), Expect = 4e-88
 Identities = 165/208 (79%), Positives = 189/208 (90%), Gaps = 1/208 (0%)
 Frame = +2

Query: 137 SVVPANR-ARRSTMDDEKLVFETSQGVEPILSFDHMGIKDDLLRGIYSYGFDKPSAIQQR 313
           SVVPA R ARR+  +DEKLVFET++G+EP+ SFD MG+K+D+LRGIY+YGF+KPSAIQQR
Sbjct: 4   SVVPAGRSARRAAAEDEKLVFETTEGIEPVASFDEMGLKEDVLRGIYNYGFEKPSAIQQR 63

Query: 314 AVHPIISGRDVIAQAQSGTGKTSMIALTVCQMVNTSSTEVQALILSPTRELAAQTEQTIR 493
           A+ PII GRDVIAQAQSGTGKTSMIALT CQ+V+T++ EVQALILSPTRELA QTE+ I 
Sbjct: 64  ALMPIIKGRDVIAQAQSGTGKTSMIALTACQLVDTANREVQALILSPTRELAEQTEKVIT 123

Query: 494 AIGNHLNIKAHACIGGKSVGEDIRKLESGVQVVSGTPGRVCDMIKRRSLRTRDIKLLILD 673
           AIG ++NI+ HACIGGKSVGEDIRKLE GV VVSGTPGRVCDMIKRRSLRTR I++L+LD
Sbjct: 124 AIGENINIQVHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRSLRTRAIRVLVLD 183

Query: 674 ESDEMLSRGFKDQIYDVYRYLPPELQPI 757
           ESDEMLSRGFKDQIYDVYRYLPPELQ +
Sbjct: 184 ESDEMLSRGFKDQIYDVYRYLPPELQVV 211


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