BLASTX nr result

ID: Cnidium21_contig00010485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010485
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866413.1| hypothetical protein ARALYDRAFT_919346 [Arab...   218   1e-54
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   217   2e-54
ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arab...   216   5e-54
ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   215   6e-54
ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucum...   215   8e-54

>ref|XP_002866413.1| hypothetical protein ARALYDRAFT_919346 [Arabidopsis lyrata subsp.
           lyrata] gi|297312248|gb|EFH42672.1| hypothetical protein
           ARALYDRAFT_919346 [Arabidopsis lyrata subsp. lyrata]
          Length = 793

 Score =  218 bits (554), Expect = 1e-54
 Identities = 98/163 (60%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
 Frame = +3

Query: 192 YDDGKFYPCTTDGSHIMIGEGPGAGYTINVPWQGDGCGDADYNAVWDEILMPVARKFDPN 371
           YD G FYP + DG + M+GEGPG G+ INVPW+  GCGDADY A WD IL+PV ++F+P+
Sbjct: 252 YDHGSFYPASDDGDYNMVGEGPGKGFNINVPWEQGGCGDADYLAAWDHILIPVTKEFNPD 311

Query: 372 LVMVSAGFDAAVGDPLGGCYVTPRGYGVMLKKIMELADGRLVMALEGGYNIESLEESSLA 551
           ++++SAGFDAA+GDPLGGC +TP GY VMLKK+ME A G++V+ALEGGYN+ESL +SSLA
Sbjct: 312 IILLSAGFDAAIGDPLGGCCITPDGYSVMLKKLMEFAQGKIVLALEGGYNLESLAKSSLA 371

Query: 552 CVKVLLGDT-VLSSFEERPLDSTHQLINLVRKNLCGFWPVLAD 677
           CV+VLL +  +  S    PL+ST ++I  VR+ LC +WP LAD
Sbjct: 372 CVQVLLEEKGIQCSSGAYPLESTRRVIRAVRERLCTYWPSLAD 414


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
           gi|222848818|gb|EEE86365.1| histone deacetylase [Populus
           trichocarpa]
          Length = 646

 Score =  217 bits (552), Expect = 2e-54
 Identities = 103/171 (60%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = +3

Query: 177 FNL*WYDDGKFYPCTTDGSHIMIGEGPGAGYTINVPWQGDGCGDADYNAVWDEILMPVAR 356
           F++  ++ G FYP   DG + MIGEGPG GY INVPW+   CGDADY AVWD IL+PVA+
Sbjct: 199 FSVHRHEFGSFYPGNDDGFYTMIGEGPGTGYNINVPWEHARCGDADYLAVWDHILIPVAK 258

Query: 357 KFDPNLVMVSAGFDAAVGDPLGGCYVTPRGYGVMLKKIMELADGRLVMALEGGYNIESLE 536
           KFDP++++VSAGFDAAVGDPLGGC VTP GY VMLKK+M+ A G++++ALEGGYN++S+ 
Sbjct: 259 KFDPDMIIVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMDFAQGKIMLALEGGYNLDSIA 318

Query: 537 ESSLACVKVLLGDTVLS-SFEERPLDSTHQLINLVRKNLCGFWPVLADSAP 686
            S LAC+KVLL D  +S S E  P +ST ++I  VRK L  +WP LAD  P
Sbjct: 319 NSFLACMKVLLEDKPVSGSVEAYPFESTWRVIQAVRKKLSPYWPALADELP 369


>ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
           lyrata] gi|297312247|gb|EFH42671.1| hypothetical protein
           ARALYDRAFT_919345 [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score =  216 bits (549), Expect = 5e-54
 Identities = 100/168 (59%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = +3

Query: 177 FNL*WYDDGKFYPCTTDGSHIMIGEGPGAGYTINVPWQGDGCGDADYNAVWDEILMPVAR 356
           F++  ++ G FYP   DG + M+GEGPG G+ INVPW    CGDADY A WD IL+PVAR
Sbjct: 218 FSVHRHEYGSFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAR 277

Query: 357 KFDPNLVMVSAGFDAAVGDPLGGCYVTPRGYGVMLKKIMELADGRLVMALEGGYNIESLE 536
           +F+P+++++SAGFDAA+GDPLGGC VTP  Y VMLKK+ME A G++VMALEGGYN++S+ 
Sbjct: 278 EFNPDIILLSAGFDAAIGDPLGGCRVTPYAYSVMLKKLMEFAHGKIVMALEGGYNLDSIA 337

Query: 537 ESSLACVKVLLGD-TVLSSFEERPLDSTHQLINLVRKNLCGFWPVLAD 677
           +SSLACV+VLLGD  +  S E  P +ST ++I  VRK LC +WP LAD
Sbjct: 338 KSSLACVQVLLGDKQIHGSSEAYPFESTWRVIQAVRKRLCAYWPSLAD 385


>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
           gi|297733877|emb|CBI15124.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  215 bits (548), Expect = 6e-54
 Identities = 100/171 (58%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = +3

Query: 177 FNL*WYDDGKFYPCTTDGSHIMIGEGPGAGYTINVPWQGDGCGDADYNAVWDEILMPVAR 356
           F++  ++ G FYP   +G + M GEGPGAGY INVPW+   CGDADY AVWD IL+PVA+
Sbjct: 203 FSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAK 262

Query: 357 KFDPNLVMVSAGFDAAVGDPLGGCYVTPRGYGVMLKKIMELADGRLVMALEGGYNIESLE 536
            F+P++V++SAGFDAA+GDPLGGC+VTP GY VMLKK+ME ++G+++MALEGGYN+ SL 
Sbjct: 263 DFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLA 322

Query: 537 ESSLACVKVLLGD-TVLSSFEERPLDSTHQLINLVRKNLCGFWPVLADSAP 686
            S LACV+VLL D  +  S E  P +ST ++I  VR+ L  FWP LAD  P
Sbjct: 323 NSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTLADELP 373


>ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucumis sativus]
          Length = 659

 Score =  215 bits (547), Expect = 8e-54
 Identities = 100/171 (58%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = +3

Query: 177 FNL*WYDDGKFYPCTTDGSHIMIGEGPGAGYTINVPWQGDGCGDADYNAVWDEILMPVAR 356
           F++  ++ G FYP T DG +  +GEGPGAGY INVPW+   CGDADY AVWD IL+PVA 
Sbjct: 212 FSVHRHEYGSFYPATHDGFYTKVGEGPGAGYNINVPWENGRCGDADYLAVWDHILLPVAE 271

Query: 357 KFDPNLVMVSAGFDAAVGDPLGGCYVTPRGYGVMLKKIMELADGRLVMALEGGYNIESLE 536
           +++P+++MVSAGFDAAVGDPLGGC VTP GY +MLKK+M LA G++V+ALEGGYN++S+ 
Sbjct: 272 EYNPDMIMVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLMNLAQGKIVLALEGGYNLDSIA 331

Query: 537 ESSLACVKVLL-GDTVLSSFEERPLDSTHQLINLVRKNLCGFWPVLADSAP 686
            S LAC ++LL G TV    E  P +ST Q+I  VR+ L  FWP+L+D  P
Sbjct: 332 SSMLACAELLLDGRTVNKPQETYPFESTWQVIQAVRQELSPFWPILSDEIP 382


Top