BLASTX nr result

ID: Cnidium21_contig00010458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010458
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medica...    65   3e-08
ref|XP_002535452.1| conserved hypothetical protein [Ricinus comm...    64   6e-08

>ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477395|gb|AES58598.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 339

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 42/90 (46%), Positives = 44/90 (48%)
 Frame = -3

Query: 306 LMMKHNFYLSADDDVHSWLDALNEKELSRLRKNFLRN*AASFK*VGGRLCIVGVRRTADE 127
           LMMK +  LSADDDVHSW                             R  I+G       
Sbjct: 25  LMMKQDPDLSADDDVHSWG-------------------------APDRRRIIGT------ 53

Query: 126 **VPPPQAEFVSRVIGDHFARFGGHLSQPP 37
              P PQAE VSRVIGDHFARFGGHLSQPP
Sbjct: 54  ---PTPQAELVSRVIGDHFARFGGHLSQPP 80


>ref|XP_002535452.1| conserved hypothetical protein [Ricinus communis]
           gi|223523063|gb|EEF26931.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 55

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   QKLDRGQDAVGRRRLTQVPPEPREMVAYYTAH 96
           QK DRGQDAVGRRRLTQVP EPREMVAYYTAH
Sbjct: 24  QKWDRGQDAVGRRRLTQVPLEPREMVAYYTAH 55


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