BLASTX nr result

ID: Cnidium21_contig00010450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010450
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD43146.1|AC007504_1 Hypothetical Protein [Arabidopsis thali...   106   6e-21
gb|AAG50652.1|AC073433_4 transposase, putative [Arabidopsis thal...   103   5e-20
gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...   103   5e-20
gb|AAF79782.1|AC020646_5 T32E20.5 [Arabidopsis thaliana]              101   1e-19
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali...   101   2e-19

>gb|AAD43146.1|AC007504_1 Hypothetical Protein [Arabidopsis thaliana]
          Length = 258

 Score =  106 bits (264), Expect = 6e-21
 Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
 Frame = -3

Query: 583 RVSSSKKTQLELYWEEPKVDRKV--HLDVLDFWGGNRFRYPELAAMACDILSIPITTVAL 410
           +V SS K++L++Y  EP +D     H +VL +W  N  R+ EL++MACD+LSIPITTVA 
Sbjct: 139 KVGSSGKSELDIYLGEPTLDMAAFRHFNVLAYWKDNSCRFKELSSMACDVLSIPITTVAS 198

Query: 409 EAAFSAGGRVLNKYRTALLPENAETLICARDWLYG 305
           E++FS G  VL+KYR++LLPEN + LIC R+WL G
Sbjct: 199 ESSFSIGSGVLSKYRSSLLPENIQALICTRNWLRG 233


>gb|AAG50652.1|AC073433_4 transposase, putative [Arabidopsis thaliana]
          Length = 659

 Score =  103 bits (256), Expect = 5e-20
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
 Frame = -3

Query: 577 SSSKKTQLELYWE-EPKVDRKVHLD--VLDFWGGNRFRYPELAAMACDILSIPITTVALE 407
           S S K+ LE+Y + EP+++ K   D  +L FW  N+ RY +LA+MA D+LSIPITTVA E
Sbjct: 533 SKSTKSTLEIYLDDEPRLEMKTFSDMEILSFWKENQHRYGDLASMASDLLSIPITTVASE 592

Query: 406 AAFSAGGRVLNKYRTALLPENAETLICARDWLYG 305
           +AFS GGRVLN +R  LLP+N + LIC R+WL G
Sbjct: 593 SAFSVGGRVLNPFRNRLLPQNVQALICTRNWLLG 626


>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score =  103 bits (256), Expect = 5e-20
 Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = -3

Query: 565 KTQLELYWEEPKVDRKVH--LDVLDFWGGNRFRYPELAAMACDILSIPITTVALEAAFSA 392
           K+ L++Y E+PK++ K H  L+VL +W  NR R+  LA MA D+LSIPIT+VA E++FS 
Sbjct: 496 KSALDMYLEDPKLEMKNHPNLNVLQYWKENRLRFGALAYMAMDVLSIPITSVASESSFSI 555

Query: 391 GGRVLNKYRTALLPENAETLICARDWLYG 305
           G  VLNKYR+ LLP N + L+C R WLYG
Sbjct: 556 GSHVLNKYRSRLLPTNVQALLCTRSWLYG 584


>gb|AAF79782.1|AC020646_5 T32E20.5 [Arabidopsis thaliana]
          Length = 141

 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 3/94 (3%)
 Frame = -3

Query: 577 SSSKKTQLELYWE-EPKVDRKVHLD--VLDFWGGNRFRYPELAAMACDILSIPITTVALE 407
           S S K+ LE+Y + EP+++ K   D  +L FW  N+ RY +LA+MA D+ SIPITTVA E
Sbjct: 38  SKSTKSTLEIYLDDEPRLEMKTFSDMEILSFWKENQHRYTDLASMASDLFSIPITTVASE 97

Query: 406 AAFSAGGRVLNKYRTALLPENAETLICARDWLYG 305
           +AFS GGRVLN +R  LLP+N + LIC R+WL G
Sbjct: 98  SAFSVGGRVLNPFRNRLLPQNVQALICTRNWLRG 131


>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
          Length = 577

 Score =  101 bits (251), Expect = 2e-19
 Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query: 565 KTQLELYWEEPKVDRKVH--LDVLDFWGGNRFRYPELAAMACDILSIPITTVALEAAFSA 392
           K+ L++Y EEP +D      +DV+ +W  N  R+ EL++MACDILSIPITTVA E+AFS 
Sbjct: 454 KSPLDMYLEEPVLDMVSFRDMDVIAYWKNNVSRFKELSSMACDILSIPITTVASESAFSI 513

Query: 391 GGRVLNKYRTALLPENAETLICARDWLYG 305
           G RVLNKYR+ LLP N + L+C R+W  G
Sbjct: 514 GSRVLNKYRSCLLPTNVQALLCTRNWFRG 542


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