BLASTX nr result

ID: Cnidium21_contig00010444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010444
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Br...   127   1e-27
ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [S...   125   3e-27
dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]          125   4e-27
ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group] g...   125   4e-27
gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indi...   125   4e-27

>ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Brachypodium distachyon]
          Length = 1218

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/104 (65%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -2

Query: 399  QRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVIIFDPDWNPSTDLQARERDRYIG 223
            QRM LIDEFNN  E+FIFILT KVGGLGTNL GAN VIIFDPDWNPSTD+QARER   IG
Sbjct: 799  QRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIG 858

Query: 222  QTKDVTVFSVIGILVRQKMS*FSAWNNRKKVYHRQIYKHFSLTK 91
            QT+DVTV+ +I           +     +KVYHRQIYKHF   K
Sbjct: 859  QTRDVTVYRLI-----------TRGTIEEKVYHRQIYKHFLTNK 891



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
 Frame = -1

Query: 199  QRDWYIGQTKDVIVFSVEQ----SKKGVSPTNL*AFLTNKIVKNSQQKRFFKSRDMKVIF 32
            +R W IGQT+DV V+ +       +K         FLTNK++KN QQ+RFFK+RDMK +F
Sbjct: 852  ERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMKDLF 911

Query: 31   ILTD 20
             L D
Sbjct: 912  TLQD 915


>ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
            gi|241929513|gb|EES02658.1| hypothetical protein
            SORBIDRAFT_03g009030 [Sorghum bicolor]
          Length = 1208

 Score =  125 bits (315), Expect = 3e-27
 Identities = 68/114 (59%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = -2

Query: 399  QRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVIIFDPDWNPSTDLQARERDRYIG 223
            QRM LIDEFNN  E+F+FILT KVGGLGTNL GAN +II+DPDWNPSTD+QARER   IG
Sbjct: 789  QRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIG 848

Query: 222  QTKDVTVFSVIGILVRQKMS*FSAWNNRKKVYHRQIYKHFSLTK**KIRSKKGF 61
            QT+DVTV+ +I           +     +KVYHRQIYKHF   K  K   +K F
Sbjct: 849  QTRDVTVYRLI-----------TRGTIEEKVYHRQIYKHFLTNKVLKNPQQKRF 891



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
 Frame = -1

Query: 199  QRDWYIGQTKDVIVFSVEQ----SKKGVSPTNL*AFLTNKIVKNSQQKRFFKSRDMKVIF 32
            +R W IGQT+DV V+ +       +K         FLTNK++KN QQKRFFK+RDMK +F
Sbjct: 842  ERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQKRFFKARDMKDLF 901

Query: 31   ILTD 20
             L D
Sbjct: 902  TLQD 905


>dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]
          Length = 789

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/104 (63%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -2

Query: 399 QRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVIIFDPDWNPSTDLQARERDRYIG 223
           QRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II+DPDWNPSTD+QARER   IG
Sbjct: 369 QRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIG 428

Query: 222 QTKDVTVFSVIGILVRQKMS*FSAWNNRKKVYHRQIYKHFSLTK 91
           QT+DVTV+ +I           +     +KVYHRQIYKHF   K
Sbjct: 429 QTRDVTVYRLI-----------TRGTIEEKVYHRQIYKHFLTNK 461


>ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group]
            gi|15128457|dbj|BAB62641.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|20804446|dbj|BAB92143.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B
            [Oryza sativa Japonica Group]
            gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa
            Japonica Group]
          Length = 1187

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/104 (63%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -2

Query: 399  QRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVIIFDPDWNPSTDLQARERDRYIG 223
            QRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II+DPDWNPSTD+QARER   IG
Sbjct: 767  QRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIG 826

Query: 222  QTKDVTVFSVIGILVRQKMS*FSAWNNRKKVYHRQIYKHFSLTK 91
            QT+DVTV+ +I           +     +KVYHRQIYKHF   K
Sbjct: 827  QTRDVTVYRLI-----------TRGTIEEKVYHRQIYKHFLTNK 859


>gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group]
            gi|222617568|gb|EEE53700.1| hypothetical protein
            OsJ_00022 [Oryza sativa Japonica Group]
          Length = 1355

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/104 (63%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -2

Query: 399  QRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVIIFDPDWNPSTDLQARERDRYIG 223
            QRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II+DPDWNPSTD+QARER   IG
Sbjct: 935  QRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIG 994

Query: 222  QTKDVTVFSVIGILVRQKMS*FSAWNNRKKVYHRQIYKHFSLTK 91
            QT+DVTV+ +I           +     +KVYHRQIYKHF   K
Sbjct: 995  QTRDVTVYRLI-----------TRGTIEEKVYHRQIYKHFLTNK 1027


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