BLASTX nr result

ID: Cnidium21_contig00010442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010442
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Br...   154   7e-36
dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]          152   3e-35
ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group] g...   152   3e-35
ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [S...   152   3e-35
gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indi...   152   3e-35

>ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Brachypodium distachyon]
          Length = 1218

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/125 (65%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    ESF*IGCCYTYRRMDGITPVKQRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVII 177
            E+F   C Y YRRMDG+TP KQRM LIDEFNN  E+FIFILT KVGGLGTNL GAN VII
Sbjct: 778  ENFLTACDYPYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVII 837

Query: 178  FDPDWNPSTDLQARERDRYIGQTKDVTVFSVISILVRRKMSQFSAWNN*KKVYHRQIYKH 357
            FDPDWNPSTD+QARER   IGQT+DVTV+ +I+   R  + +        KVYHRQIYKH
Sbjct: 838  FDPDWNPSTDMQARERAWRIGQTRDVTVYRLIT---RGTIEE--------KVYHRQIYKH 886

Query: 358  FSLTK 372
            F   K
Sbjct: 887  FLTNK 891


>dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]
          Length = 789

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   ESF*IGCCYTYRRMDGITPVKQRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVII 177
           E+F   C Y YRRMDG+TP KQRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II
Sbjct: 348 ENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIII 407

Query: 178 FDPDWNPSTDLQARERDRYIGQTKDVTVFSVISILVRRKMSQFSAWNN*KKVYHRQIYKH 357
           +DPDWNPSTD+QARER   IGQT+DVTV+ +I+   R  + +        KVYHRQIYKH
Sbjct: 408 YDPDWNPSTDMQARERAWRIGQTRDVTVYRLIT---RGTIEE--------KVYHRQIYKH 456

Query: 358 FSLTK 372
           F   K
Sbjct: 457 FLTNK 461


>ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group]
            gi|15128457|dbj|BAB62641.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|20804446|dbj|BAB92143.1| putative DNA repair and
            recombination protein [Oryza sativa Japonica Group]
            gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B
            [Oryza sativa Japonica Group]
            gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa
            Japonica Group]
          Length = 1187

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    ESF*IGCCYTYRRMDGITPVKQRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVII 177
            E+F   C Y YRRMDG+TP KQRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II
Sbjct: 746  ENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIII 805

Query: 178  FDPDWNPSTDLQARERDRYIGQTKDVTVFSVISILVRRKMSQFSAWNN*KKVYHRQIYKH 357
            +DPDWNPSTD+QARER   IGQT+DVTV+ +I+   R  + +        KVYHRQIYKH
Sbjct: 806  YDPDWNPSTDMQARERAWRIGQTRDVTVYRLIT---RGTIEE--------KVYHRQIYKH 854

Query: 358  FSLTK 372
            F   K
Sbjct: 855  FLTNK 859


>ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
            gi|241929513|gb|EES02658.1| hypothetical protein
            SORBIDRAFT_03g009030 [Sorghum bicolor]
          Length = 1208

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/125 (63%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    ESF*IGCCYTYRRMDGITPVKQRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVII 177
            E+F   C Y YRRMDG+TP KQRM LIDEFNN  E+F+FILT KVGGLGTNL GAN +II
Sbjct: 768  ENFLTACDYQYRRMDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIII 827

Query: 178  FDPDWNPSTDLQARERDRYIGQTKDVTVFSVISILVRRKMSQFSAWNN*KKVYHRQIYKH 357
            +DPDWNPSTD+QARER   IGQT+DVTV+ +I+   R  + +        KVYHRQIYKH
Sbjct: 828  YDPDWNPSTDMQARERAWRIGQTRDVTVYRLIT---RGTIEE--------KVYHRQIYKH 876

Query: 358  FSLTK 372
            F   K
Sbjct: 877  FLTNK 881


>gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group]
            gi|222617568|gb|EEE53700.1| hypothetical protein
            OsJ_00022 [Oryza sativa Japonica Group]
          Length = 1355

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    ESF*IGCCYTYRRMDGITPVKQRMTLIDEFNNLGEVFIFILT-KVGGLGTNLIGANMVII 177
            E+F   C Y YRRMDG+TP KQRM LIDEFNN  E+FIFILT KVGGLGTNL GAN +II
Sbjct: 914  ENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIII 973

Query: 178  FDPDWNPSTDLQARERDRYIGQTKDVTVFSVISILVRRKMSQFSAWNN*KKVYHRQIYKH 357
            +DPDWNPSTD+QARER   IGQT+DVTV+ +I+   R  + +        KVYHRQIYKH
Sbjct: 974  YDPDWNPSTDMQARERAWRIGQTRDVTVYRLIT---RGTIEE--------KVYHRQIYKH 1022

Query: 358  FSLTK 372
            F   K
Sbjct: 1023 FLTNK 1027


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