BLASTX nr result

ID: Cnidium21_contig00010434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010434
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257...   194   2e-47
ref|XP_002521877.1| zinc finger protein, putative [Ricinus commu...   188   2e-45
ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...   158   2e-36
ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251...   157   3e-36

>ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257993 [Vitis vinifera]
          Length = 587

 Score =  194 bits (494), Expect = 2e-47
 Identities = 145/342 (42%), Positives = 178/342 (52%), Gaps = 24/342 (7%)
 Frame = -3

Query: 974  DCGTLFSRRDSFITHRAFCDALAQETARHPPGLSSIGSHLFGNNHMNMNLSQVGNQIS-- 801
            DCGTLFSRRDSFITHRAFCDALAQE+AR+PP L+++G HL+G + M + LSQVG+QI+  
Sbjct: 177  DCGTLFSRRDSFITHRAFCDALAQESARNPPSLTNMGGHLYGTSQMTLGLSQVGSQIASL 236

Query: 800  ------SNNMLRLDTPGATAKLEQLIPSSNNPNSPLFTAQQHPQSMSSSPFYMPQDHSNQ 639
                  S+N+LRLD+ GA AK E L+P    P++P F   + PQ M SS FYMP   SNQ
Sbjct: 237  HDQNHPSSNILRLDSAGA-AKYEHLLP----PSNPSF--GKPPQPMPSSAFYMPD--SNQ 287

Query: 638  AYQEMQ-------NKPLHHGLMQLPDLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
             YQE Q       NKP  HGLMQ PD Q                                
Sbjct: 288  GYQEHQSHHTLLGNKPF-HGLMQFPDHQ-GNANNSPSAAANLFNLGFFPNNSTSSSISNS 345

Query: 479  XXXNASNNMSSSSYLMPDHPFNNTNAXXXXXXXXXXXXXXXXXXXXXXXXNHENQG---S 309
               N S  +  S +L PD  FNN NA                        +   Q    +
Sbjct: 346  NNANNSTTLPPSGFLSPDQ-FNNGNASGQGTTLFSSSMSDHVGSGLSSLYSTSMQQESLA 404

Query: 308  PHMSATALLQKAAQMGSTTSNTSATFFKGLGSSSSSMNGANKFARSFSVNSENIES---- 141
            PHMSATALLQKAAQMG TTS+ S++  +GLG SSS+  GA    +  S N  ++ S    
Sbjct: 405  PHMSATALLQKAAQMGPTTSSNSSSLLRGLGGSSST--GAKSDRQLLSSNFSSLRSQMEN 462

Query: 140  -NHLQGXXXXXXXXXXXXXMFGGNEQENTNYGGFSG-GVRLE 21
             NHLQG                G+ QEN N+GGF+G G+ LE
Sbjct: 463  ENHLQGLMNSLANGNSSIFGGSGHAQEN-NFGGFNGRGITLE 503


>ref|XP_002521877.1| zinc finger protein, putative [Ricinus communis]
            gi|223538915|gb|EEF40513.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 571

 Score =  188 bits (477), Expect = 2e-45
 Identities = 141/349 (40%), Positives = 180/349 (51%), Gaps = 31/349 (8%)
 Frame = -3

Query: 974  DCGTLFSRRDSFITHRAFCDALAQETARHPPGLSSIGSHLFGNNHMNMNLSQVGNQI--- 804
            DCGTLFSRRDSFITHRAFCDALAQE+ARHP GL++IGSHL+GNNHM++ LSQVG+ I   
Sbjct: 186  DCGTLFSRRDSFITHRAFCDALAQESARHPTGLNTIGSHLYGNNHMSLGLSQVGSPISSL 245

Query: 803  -----SSNNMLRLDTPGATAKLEQLIPSSNNPNSPLFTAQQHPQSMSSSPFYMPQDHSNQ 639
                 SS+N+LRL + GA AK E +IP SN+ + P         +M +S F+M    +NQ
Sbjct: 246  QDQNHSSSNLLRLGSAGA-AKFEHIIPPSNSTSLP---------TMPASAFFM--SDANQ 293

Query: 638  AYQEMQNKPLHHGLMQLPDLQT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAS 462
                  NKPL HGLMQLPDLQ+                                    A+
Sbjct: 294  G--SFSNKPL-HGLMQLPDLQSATNNSSVATNLFNLSFFSNNSPGNRISNSDNGNSSTAA 350

Query: 461  NNMSSSSYLMPDHPFNNTNAXXXXXXXXXXXXXXXXXXXXXXXXNHENQG--SPHMSATA 288
             N+ +S +L P +PFN  N                         N   Q   +PHMSATA
Sbjct: 351  TNLVNSGFLSP-NPFNGGNGGQGSTIFANNMGDPVGSGIPSLYSNSMQQENITPHMSATA 409

Query: 287  LLQKAAQMGSTT-SNTSATFFKGLGSSSSSMNGANK-------FARSF-----------S 165
            LLQKAAQMGSTT SN ++T  +GLGSSSS+ N +++       F  SF            
Sbjct: 410  LLQKAAQMGSTTSSNNNSTLLRGLGSSSSTGNKSDRSPLVSANFGSSFGNAKIGDHHHQG 469

Query: 164  VNSENIESNHLQGXXXXXXXXXXXXXMFGGNEQENTNYGGF-SGGVRLE 21
            + ++    N LQG             +FGG   ++  +GGF S G+ LE
Sbjct: 470  LGTQIESENQLQG--LMNSLANGGSSIFGGGHGQDNGFGGFTSSGISLE 516


>ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|222863785|gb|EEF00916.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  162 bits (411), Expect = 9e-38
 Identities = 119/292 (40%), Positives = 146/292 (50%), Gaps = 13/292 (4%)
 Frame = -3

Query: 974 DCGTLFSRRDSFITHRAFCDALAQETARHPPGLSSIGSHLFGNNHMNMNLSQVGNQI--- 804
           DCGTLFSRRDSFITHRAFCDALAQE+ARHP  L++IGSHL+GNNHM++  SQVG+QI   
Sbjct: 160 DCGTLFSRRDSFITHRAFCDALAQESARHPTSLNTIGSHLYGNNHMSLGFSQVGSQISHL 219

Query: 803 -----SSNNMLRLDTPGATAKLEQLIPSSNNPNSPLFTAQQHPQSMSSSPFYMPQDHSNQ 639
                S NNMLRL + GA A  E LIP  N P+ P+         M  S F+M    +NQ
Sbjct: 220 QDHHPSGNNMLRLGSAGA-ANFEHLIPPPNPPSMPM---------MPPSGFFM--GDANQ 267

Query: 638 AYQEMQNKPLHHGLMQLPDLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNASN 459
                 NK L HGLMQLPDLQ+                                   ++ 
Sbjct: 268 G--PFPNKSL-HGLMQLPDLQSNTNNPSSASNLFNFGFFSNNSNTGRTSNNDNANTGSTT 324

Query: 458 NMSSSSYLMPDHPFNNTNAXXXXXXXXXXXXXXXXXXXXXXXXNH----ENQGSPHMSAT 291
              +S  L+    FNN N                          +    +   +PH+SAT
Sbjct: 325 TNLASPGLLNATQFNNVNGAGQRTSVFPTNMSGDHVGSAMSSFFNTSMQQENITPHVSAT 384

Query: 290 ALLQKAAQMGSTT-SNTSATFFKGLGSSSSSMNGANKFARSFSVNSENIESN 138
           ALLQKAAQMGSTT SN+ +   + LGSSS++  GA       S N  +  SN
Sbjct: 385 ALLQKAAQMGSTTSSNSPSGLLRSLGSSSTT--GAKSIRPLVSTNFGSSFSN 434


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538916|gb|EEF40514.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 589

 Score =  158 bits (400), Expect = 2e-36
 Identities = 114/299 (38%), Positives = 150/299 (50%), Gaps = 24/299 (8%)
 Frame = -3

Query: 974  DCGTLFSRRDSFITHRAFCDALAQETARHPP-GLSSIGSHLFGNNHMNMNLSQVGNQIS- 801
            DCGTLFSRRDSFITHRAFCDALAQE+AR+PP  L++IGSHL+G ++M++ LSQV  QIS 
Sbjct: 178  DCGTLFSRRDSFITHRAFCDALAQESARNPPTNLNTIGSHLYGGSNMSLGLSQVNTQISS 237

Query: 800  ----SNNMLRLDTPGATAKLEQLIPSSNNPNSPLFTAQQHPQSMSSSPFYMPQDHSN--- 642
                S+++LRL     T + + L+PSS      +      PQ M S  F+M + + N   
Sbjct: 238  MQDQSSDILRLGGGSRTGQFDHLLPSS--MGGSVSFRPSPPQPMPSPAFFMQEPNQNYHD 295

Query: 641  --QAYQE-MQNKPLHHGLMQLPDLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
              QA Q  +QNKP HHGLMQ  +L                                    
Sbjct: 296  EHQAQQGLLQNKPFHHGLMQFAELHN-------TTNTNPPASNIFNLSFLSNSSTTSSIT 348

Query: 470  NASNNMSSSSYLMPDHPFNNTN---------AXXXXXXXXXXXXXXXXXXXXXXXXNHEN 318
            N++N  +S++ L+  + F+N N                                    ++
Sbjct: 349  NSNNANNSNNSLLMSNQFSNQNGASGGGDGSTMFSNHIMGDHHQMNSGVPSLFTSSVQKD 408

Query: 317  QGSPHMSATALLQKAAQMGSTTSNTSATFFKGLGSSSSS---MNGANKFARSFSVNSEN 150
               PHMSATALLQKAAQMGST+S  SA+  +  GSSSSS    + A  F   FS N +N
Sbjct: 409  NTVPHMSATALLQKAAQMGSTSSTYSASLLRSFGSSSSSTGMKSAAANFGEIFSENDQN 467


>ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251079 [Vitis vinifera]
          Length = 603

 Score =  157 bits (398), Expect = 3e-36
 Identities = 132/344 (38%), Positives = 166/344 (48%), Gaps = 32/344 (9%)
 Frame = -3

Query: 974  DCGTLFSRRDSFITHRAFCDALAQETARHPPGLSSIGSHLFGNNHMNMNLSQVGNQISS- 798
            DCGTLFSRRDSFITHRAFCDALAQE+ARHP  +S+IGSHL+G+++M + LSQVG QISS 
Sbjct: 176  DCGTLFSRRDSFITHRAFCDALAQESARHPTPMSTIGSHLYGSSNMGLGLSQVGPQISSM 235

Query: 797  -------NNMLRLDTPGATA-KLEQLIPSSNNPNSPLFTAQQHPQSMSSSPFYMPQD--- 651
                    +MLRL   GA A + + LIP +   +S      + PQ M S  FY+P+    
Sbjct: 236  PDQSHQPGDMLRLG--GARAGQFDHLIPPAIGSSS-----FRTPQPMPSQAFYIPEPNQE 288

Query: 650  -HSNQAYQE---MQNKPLHHGLMQLPDLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 483
             H +Q  Q    + NKP  HGL+ LPDLQ                               
Sbjct: 289  FHEDQQSQHGGLLTNKPF-HGLVHLPDLQNNTNNPSSAANLFNLSFFSNSSNTNSMLSNT 347

Query: 482  XXXXNASNNMSSSSYLMPDHPFNNTNA-------XXXXXXXXXXXXXXXXXXXXXXXXNH 324
                N S NM SS  L+ D  FN  N                                 +
Sbjct: 348  NNANN-STNMPSSGLLISDQ-FNTVNGGSGSERNNLFPSNIIGDQISSGVPSLFSTSLQN 405

Query: 323  ENQGSPHMSATALLQKAAQMGSTTSNTSATFFKGLGSSSSSMNGANK------FARSFSV 162
            EN  S HMSATALLQKAAQMGST+SN SA+  +G   SSS+   +++      F   F  
Sbjct: 406  ENAVS-HMSATALLQKAAQMGSTSSNNSASLLRGFAGSSSANAKSDRPLVGPNFGGVFGE 464

Query: 161  NSENIES--NHL-QGXXXXXXXXXXXXXMFGGNEQENTNYGGFS 39
            N  +++   N L  G              + G+E ENT YGGF+
Sbjct: 465  NESHLQDLMNSLGGGSSSIFGGGSGGVNAYSGHENENT-YGGFN 507


Top