BLASTX nr result

ID: Cnidium21_contig00010409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010409
         (2279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]             276   1e-71
ref|YP_740155.1| ribosomal protein L16 [Daucus carota] gi|122221...   269   2e-69
ref|YP_588155.1| ribosomal protein L16 [Helianthus annuus] gi|18...   268   6e-69
gb|ABD47270.1| ribosomal protein L16 [Lactuca sativa]                 268   6e-69
ref|YP_004376457.1| ribosomal protein L16 [Olea europaea subsp. ...   266   2e-68

>gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]
          Length = 136

 Score =  276 bits (707), Expect = 1e-71
 Identities = 135/136 (99%), Positives = 136/136 (100%)
 Frame = +3

Query: 219 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 398
           +NYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 399 RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 578
           RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS
Sbjct: 61  RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 120

Query: 579 IASSKMPIRTQFIISG 626
           IASSKMPIRTQFIISG
Sbjct: 121 IASSKMPIRTQFIISG 136


>ref|YP_740155.1| ribosomal protein L16 [Daucus carota]
           gi|122221302|sp|Q0G9S4.1|RK16_DAUCA RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|113200945|gb|ABI32461.1| ribosomal protein L16
           [Daucus carota]
          Length = 135

 Score =  269 bits (688), Expect = 2e-69
 Identities = 132/133 (99%), Positives = 133/133 (100%)
 Frame = +3

Query: 228 NPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 407
           +PKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 408 KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAS 587
           KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAS
Sbjct: 63  KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAS 122

Query: 588 SKMPIRTQFIISG 626
           SKMPIRTQFIISG
Sbjct: 123 SKMPIRTQFIISG 135


>ref|YP_588155.1| ribosomal protein L16 [Helianthus annuus]
           gi|183217778|ref|YP_001837398.1| ribosomal protein L16
           [Guizotia abyssinica] gi|441403331|ref|YP_007353804.1|
           ribosomal protein L16 (chloroplast) [Chrysanthemum x
           morifolium] gi|452849089|ref|YP_007474767.1| ribosomal
           protein L16 (chloroplast) [Chrysanthemum indicum]
           gi|115502622|sp|Q1KXS1.1|RK16_HELAN RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|215275566|sp|B2LMN1.1|RK16_GUIAB RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|88656932|gb|ABD47183.1| ribosomal protein L16
           [Helianthus annuus] gi|179366293|gb|ACB86564.1|
           ribosomal protein L16 [Guizotia abyssinica]
           gi|372863244|gb|AEX99316.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum indicum]
           gi|372863483|gb|AEX99552.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum indicum]
           gi|375298874|gb|AFA45313.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 136

 Score =  268 bits (684), Expect = 6e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)
 Frame = +3

Query: 219 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 398
           +NYNPKRTRFRKQHRGRMKGISYRGN I FGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNTICFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 399 RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 578
           RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS
Sbjct: 61  RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 120

Query: 579 IASSKMPIRTQFIISG 626
           IA+SKMPIR QFIISG
Sbjct: 121 IAASKMPIRAQFIISG 136


>gb|ABD47270.1| ribosomal protein L16 [Lactuca sativa]
          Length = 136

 Score =  268 bits (684), Expect = 6e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)
 Frame = +3

Query: 219 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 398
           +NYNPKRTRFRKQHRGRMKGISYRGN I FGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNAICFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 399 RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 578
           RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS
Sbjct: 61  RGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAIS 120

Query: 579 IASSKMPIRTQFIISG 626
           IA+SKMPIR QFIISG
Sbjct: 121 IAASKMPIRAQFIISG 136


>ref|YP_004376457.1| ribosomal protein L16 [Olea europaea subsp. europaea]
           gi|334700318|ref|YP_004563817.1| ribosomal protein L16
           [Olea europaea subsp. cuspidata]
           gi|334701924|ref|YP_004564533.1| ribosomal protein L16
           [Olea europaea subsp. maroccana]
           gi|291059290|gb|ADD72126.1| ribosomal protein L16 [Olea
           europaea] gi|328795469|emb|CBR30351.1| ribosomal protein
           L16 [Olea europaea subsp. europaea]
           gi|334084437|emb|CBR23866.1| ribosomal protein L16 [Olea
           europaea subsp. cuspidata] gi|334084523|emb|CBR24660.1|
           ribosomal protein L16 [Olea europaea subsp. europaea]
           gi|334084609|emb|CBR30444.1| ribosomal protein L16 [Olea
           europaea subsp. europaea] gi|334084900|emb|CBS29278.1|
           ribosomal protein L16 [Olea europaea subsp. maroccana]
           gi|334084986|emb|CBJ04334.1| ribosomal protein L16 [Olea
           europaea subsp. cuspidata] gi|334085072|emb|CBR23775.1|
           ribosomal protein L16 [Olea europaea subsp. cuspidata]
          Length = 135

 Score =  266 bits (680), Expect = 2e-68
 Identities = 130/133 (97%), Positives = 132/133 (99%)
 Frame = +3

Query: 228 NPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 407
           +PKRTRFRKQHRGRMKGISYRGNHI FGKYALQALEPAWITSRQIEAGRRAMTRNARRGG
Sbjct: 3   SPKRTRFRKQHRGRMKGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGG 62

Query: 408 KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAS 587
           KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIA+
Sbjct: 63  KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAA 122

Query: 588 SKMPIRTQFIISG 626
           SKMPIRTQFIISG
Sbjct: 123 SKMPIRTQFIISG 135