BLASTX nr result
ID: Cnidium21_contig00010402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00010402 (975 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN39916.1| unknown [Picea sitchensis] 48 9e-07 ref|XP_001763089.1| predicted protein [Physcomitrella patens sub... 47 4e-06 ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 47 4e-06 ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2... 47 4e-06 ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 47 5e-06 >gb|ACN39916.1| unknown [Picea sitchensis] Length = 593 Score = 48.1 bits (113), Expect(2) = 9e-07 Identities = 20/28 (71%), Positives = 23/28 (82%) Frame = +3 Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKVNN 515 QIRKI+ QIR D QTLYWS TWP++V N Sbjct: 337 QIRKIITQIRPDRQTLYWSATWPREVEN 364 Score = 31.6 bits (70), Expect(2) = 9e-07 Identities = 16/23 (69%), Positives = 17/23 (73%) Frame = +2 Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382 GVEIVIA +LIDM RHTNL Sbjct: 293 GVEIVIATPGRLIDMLEARHTNL 315 >ref|XP_001763089.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685572|gb|EDQ71966.1| predicted protein [Physcomitrella patens subsp. patens] Length = 514 Score = 47.0 bits (110), Expect(2) = 4e-06 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +3 Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509 QIRKIV QIR D QTLYWS TWPK+V Sbjct: 261 QIRKIVSQIRPDRQTLYWSATWPKEV 286 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382 GVE+VIA +LIDM RHTNL Sbjct: 217 GVEVVIATPGRLIDMLEGRHTNL 239 >ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] Length = 505 Score = 47.0 bits (110), Expect(2) = 4e-06 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +3 Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509 QIRKIV QIR D QTLYWS TWPK+V Sbjct: 266 QIRKIVSQIRPDRQTLYWSATWPKEV 291 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382 GVEIVIA +LIDM + HTNL Sbjct: 222 GVEIVIATPGRLIDMMESHHTNL 244 >ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1| predicted protein [Populus trichocarpa] Length = 497 Score = 47.0 bits (110), Expect(2) = 4e-06 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +3 Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509 QIRKIV QIR D QTLYWS TWPK+V Sbjct: 258 QIRKIVSQIRPDRQTLYWSATWPKEV 283 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382 GVEIVIA +LIDM + HTNL Sbjct: 214 GVEIVIATPGRLIDMMESHHTNL 236 >ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera] gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera] Length = 506 Score = 47.0 bits (110), Expect(2) = 5e-06 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = +3 Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509 QIRKIV QIR D QTLYWS TWPK+V Sbjct: 267 QIRKIVSQIRPDRQTLYWSATWPKEV 292 Score = 30.0 bits (66), Expect(2) = 5e-06 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382 GVEIVIA +LIDM + HTNL Sbjct: 223 GVEIVIATPGRLIDMLESHHTNL 245