BLASTX nr result

ID: Cnidium21_contig00010402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010402
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39916.1| unknown [Picea sitchensis]                              48   9e-07
ref|XP_001763089.1| predicted protein [Physcomitrella patens sub...    47   4e-06
ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    47   4e-06
ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2...    47   4e-06
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    47   5e-06

>gb|ACN39916.1| unknown [Picea sitchensis]
          Length = 593

 Score = 48.1 bits (113), Expect(2) = 9e-07
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKVNN 515
           QIRKI+ QIR D QTLYWS TWP++V N
Sbjct: 337 QIRKIITQIRPDRQTLYWSATWPREVEN 364



 Score = 31.6 bits (70), Expect(2) = 9e-07
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382
           GVEIVIA   +LIDM   RHTNL
Sbjct: 293 GVEIVIATPGRLIDMLEARHTNL 315


>ref|XP_001763089.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685572|gb|EDQ71966.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 514

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509
           QIRKIV QIR D QTLYWS TWPK+V
Sbjct: 261 QIRKIVSQIRPDRQTLYWSATWPKEV 286



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382
           GVE+VIA   +LIDM   RHTNL
Sbjct: 217 GVEVVIATPGRLIDMLEGRHTNL 239


>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus]
          Length = 505

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509
           QIRKIV QIR D QTLYWS TWPK+V
Sbjct: 266 QIRKIVSQIRPDRQTLYWSATWPKEV 291



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382
           GVEIVIA   +LIDM  + HTNL
Sbjct: 222 GVEIVIATPGRLIDMMESHHTNL 244


>ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509
           QIRKIV QIR D QTLYWS TWPK+V
Sbjct: 258 QIRKIVSQIRPDRQTLYWSATWPKEV 283



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382
           GVEIVIA   +LIDM  + HTNL
Sbjct: 214 GVEIVIATPGRLIDMMESHHTNL 236


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
           gi|297743075|emb|CBI35942.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score = 47.0 bits (110), Expect(2) = 5e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 432 QIRKIVLQIRADCQTLYWSGTWPKKV 509
           QIRKIV QIR D QTLYWS TWPK+V
Sbjct: 267 QIRKIVSQIRPDRQTLYWSATWPKEV 292



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 GVEIVIAKSVQLIDMWGTRHTNL 382
           GVEIVIA   +LIDM  + HTNL
Sbjct: 223 GVEIVIATPGRLIDMLESHHTNL 245


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