BLASTX nr result

ID: Cnidium21_contig00010383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010383
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]               91   3e-16
emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]    91   3e-16
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    59   1e-06

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
 Frame = +2

Query: 110 MTNNGRSSSKSKDEGSNGVKKKVVNGTGSNATAGDXXXXXXXXXXXXXXXXNKQVPAASP 289
           M N+ R+S K+KD+  N  K + + G GS+ T+                   K++   SP
Sbjct: 1   MANDSRTSRKTKDDDINNSKGRNIRGKGSS-TSASATTDISGLRRSARETPTKKLLNPSP 59

Query: 290 QSTRRSERFVKSASVSPVSTRKSGRISKELTPSPLRRSDRXXXXXXXXXXXXXXXXXXXV 469
            STR+SER  K   V+P   RKS R+ K+  PSP RRS+R                    
Sbjct: 60  SSTRKSERLEKQTPVTPPVKRKSERVEKQRMPSPSRRSERGKNHQSPSSSGSKKSEKTSG 119

Query: 470 AVDLDQMQTKREKSLSELTLEGNKC-----EDMKSGRGKRSAYDGRTFKALFRRQVNVKA 634
           + ++   + KREKS+ E+TLE  K       D++S + K+   D R ++AL RR+VN   
Sbjct: 120 SSEMRHKKQKREKSVKEVTLEARKVSKNEEHDLESVQVKKKRMDARAYRALLRRKVN--- 176

Query: 635 TADRNGINSPQKDGIVEETSANA 703
            AD  G    + D + +E S+++
Sbjct: 177 DADLGG-KMRKPDKLFQEDSSDS 198


>emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]
          Length = 1179

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
 Frame = +2

Query: 110 MTNNGRSSSKSKDEGSNGVKKKVVNGTGSNATAGDXXXXXXXXXXXXXXXXNKQVPAASP 289
           M N+ R+S K+KD+  N  K + + G GS+ T+                   K++   SP
Sbjct: 113 MANDSRTSRKTKDDDINNSKGRNIRGKGSS-TSASATTDISGLRRSARETPTKKLLNPSP 171

Query: 290 QSTRRSERFVKSASVSPVSTRKSGRISKELTPSPLRRSDRXXXXXXXXXXXXXXXXXXXV 469
            STR+SER  K   V+P   RKS R+ K+  PSP RRS+R                    
Sbjct: 172 SSTRKSERLEKQTPVTPPVKRKSERVEKQRMPSPSRRSERGKNHQSPSSSGSKKSEKTSG 231

Query: 470 AVDLDQMQTKREKSLSELTLEGNKC-----EDMKSGRGKRSAYDGRTFKALFRRQVNVKA 634
           + ++   + KREKS+ E+TLE  K       D++S + K+   D R ++AL RR+VN   
Sbjct: 232 SSEMRHKKQKREKSVKEVTLEARKVSKNEEHDLESVQVKKKRMDARAYRALLRRKVN--- 288

Query: 635 TADRNGINSPQKDGIVEETSANA 703
            AD  G    + D + +E S+++
Sbjct: 289 DADLGG-KMRKPDKLFQEDSSDS 310


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
 Frame = +2

Query: 110 MTNNGRSSSKSKDEGS--NGVKKKVVNGTGSNATAGDXXXXXXXXXXXXXXXXNKQVPAA 283
           M N+ ++S K+K E S  N VK + +    S   +G                 +K+    
Sbjct: 1   MGNDTKASRKAKAEESKNNDVKGRNIASRSSTDKSG--------LRRSVREASSKKNVTP 52

Query: 284 SPQSTRRSERFVKSASVSPVSTRKSGR-ISKELTPSPLRRSDRXXXXXXXXXXXXXXXXX 460
           SP STR+SER  K    +P +TRKS R + K+   SPLRRS+R                 
Sbjct: 53  SPSSTRKSERLEKQTPTAPPATRKSERLVEKQSLSSPLRRSERGKNQSSSSSSGSKKSGK 112

Query: 461 XXVAVDLDQMQTKREKSLSELTLE---GNKCEDMKSGRGKRSAYDGRTFKALFRRQ---V 622
              +  + + Q K+EKS+ +L  +    +K   +K+   +    D R +KALF+RQ    
Sbjct: 113 KSSSSVMKKKQ-KKEKSVKQLETKDVGNDKKHVIKAVLVETKRMDARAYKALFKRQQKKA 171

Query: 623 NVKATAD----RNGINSPQKDGIVEETSANAE 706
           N++   +    +N   +  +DG  E  +  +E
Sbjct: 172 NLEGRCEEMKNKNADGNDCRDGASENVNGGSE 203


Top