BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010371
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35920.3| unnamed protein product [Vitis vinifera]              211   2e-52
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   211   2e-52
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   200   5e-49
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   197   3e-48
ref|XP_002884998.1| DNA binding protein [Arabidopsis lyrata subs...   197   5e-48

>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  211 bits (538), Expect = 2e-52
 Identities = 107/244 (43%), Positives = 160/244 (65%), Gaps = 2/244 (0%)
 Frame = +2

Query: 386  QKLPENTKLESLPQKQDPISKKDLEKSLEDVKVNTKALKAAENTHAPNIPCYDMSASTPD 565
            + + +  KL++L QK DP S+KDL++ L++V +N +AL++     A NIP YD +A+TP 
Sbjct: 147  KSITQAKKLQALNQKDDPRSQKDLDRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQ 206

Query: 566  KAYPLEKIIDKEAWDCLGDLLNF-SPGAKLTPDAYPIFVCNRVQKLEDIKDEHEKRTVAG 742
            +AY L+KII K  WD L D+L+    G ++   AY  FVCNR+QKL++++DE EK T+A 
Sbjct: 207  EAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLAC 266

Query: 743  VLQYITHLIKYKDMHSFDCKSVKNHKFPSIIEEKFRTLFN-EXXXXXXXXXXXXXXINYV 919
            +  YI HL+KYKD +S D  S K+HK P I+ +KF ++F  +              I+YV
Sbjct: 267  IFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYV 326

Query: 920  LVLTLFVDGYQSDAADIAKDLRTDVEELKKQYERLGCKIVNENSVLLATLPVPLKLPGLS 1099
            LVLTL+ D +++D +DIA+DLR    +L+  +E LGCK+V++N V +ATLPVPL  P L 
Sbjct: 327  LVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLR 386

Query: 1100 RSSK 1111
            +  +
Sbjct: 387  QKRR 390


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  211 bits (538), Expect = 2e-52
 Identities = 107/244 (43%), Positives = 160/244 (65%), Gaps = 2/244 (0%)
 Frame = +2

Query: 386  QKLPENTKLESLPQKQDPISKKDLEKSLEDVKVNTKALKAAENTHAPNIPCYDMSASTPD 565
            + + +  KL++L QK DP S+KDL++ L++V +N +AL++     A NIP YD +A+TP 
Sbjct: 177  KSITQAKKLQALNQKDDPRSQKDLDRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQ 236

Query: 566  KAYPLEKIIDKEAWDCLGDLLNF-SPGAKLTPDAYPIFVCNRVQKLEDIKDEHEKRTVAG 742
            +AY L+KII K  WD L D+L+    G ++   AY  FVCNR+QKL++++DE EK T+A 
Sbjct: 237  EAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLAC 296

Query: 743  VLQYITHLIKYKDMHSFDCKSVKNHKFPSIIEEKFRTLFN-EXXXXXXXXXXXXXXINYV 919
            +  YI HL+KYKD +S D  S K+HK P I+ +KF ++F  +              I+YV
Sbjct: 297  IFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYV 356

Query: 920  LVLTLFVDGYQSDAADIAKDLRTDVEELKKQYERLGCKIVNENSVLLATLPVPLKLPGLS 1099
            LVLTL+ D +++D +DIA+DLR    +L+  +E LGCK+V++N V +ATLPVPL  P L 
Sbjct: 357  LVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLR 416

Query: 1100 RSSK 1111
            +  +
Sbjct: 417  QKRR 420


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  200 bits (509), Expect = 5e-49
 Identities = 105/236 (44%), Positives = 146/236 (61%), Gaps = 1/236 (0%)
 Frame = +2

Query: 407  KLESLPQKQDPISKKDLEKSLEDVKVNTKALKAAENTHAPNIPCYDMSASTPDKAYPLEK 586
            KL +L Q+ DP +K DL+  +++V VN +AL+  +   A NIP Y+ SA+TP +AYPL+K
Sbjct: 199  KLHALKQEDDPETKSDLDGRMKNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDK 258

Query: 587  IIDKEAWDCLGDLLNFSPGAKLTPDAYPIFVCNRVQKLEDIKDEHEKRTVAGVLQYITHL 766
            II K  W  L DL             YP FV NR+ KL+DI+DE EK+ +  +  YITHL
Sbjct: 259  IILKGEWSFLEDLYFRLQETAEISATYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHL 318

Query: 767  IKYKDMHSF-DCKSVKNHKFPSIIEEKFRTLFNEXXXXXXXXXXXXXXINYVLVLTLFVD 943
            IKYKD HS  D  S K HK PS++ +KF ++F                I++VLVL+LF D
Sbjct: 319  IKYKDQHSMGDVSSAKGHKIPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFAD 378

Query: 944  GYQSDAADIAKDLRTDVEELKKQYERLGCKIVNENSVLLATLPVPLKLPGLSRSSK 1111
             + SD ADIAKDLRT   +L+  ++ LGCK + +N++ LATLP+PL+ P L +  +
Sbjct: 379  EFSSDPADIAKDLRTSPYDLRLHFDNLGCKFIRKNNLSLATLPIPLQFPELRQKRR 434


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
            max]
          Length = 424

 Score =  197 bits (502), Expect = 3e-48
 Identities = 104/233 (44%), Positives = 145/233 (62%), Gaps = 1/233 (0%)
 Frame = +2

Query: 416  SLPQKQDPISKKDLEKSLEDVKVNTKALKAAENTHAPNIPCYDMSASTPDKAYPLEKIID 595
            +L Q +DP S+++L+  ++ V VN KAL++ E+  + NIP YD SA+TP +AY L+KII 
Sbjct: 190  ALRQDEDPDSQRNLDVKMKSVTVNKKALESTESHVSRNIPPYDASATTPQEAYILDKIIL 249

Query: 596  KEAWDCLGDLLN-FSPGAKLTPDAYPIFVCNRVQKLEDIKDEHEKRTVAGVLQYITHLIK 772
            K  WD L D+ N    G +    AYP FV NR+++L  IKDE EK+ ++ +  YI HLIK
Sbjct: 250  KGEWDYLEDIYNNLQRGEEADFSAYPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIK 309

Query: 773  YKDMHSFDCKSVKNHKFPSIIEEKFRTLFNEXXXXXXXXXXXXXXINYVLVLTLFVDGYQ 952
            +KD HSFD  S K HK P+I+  KF  +F                I YVLVLTLF D ++
Sbjct: 310  FKDQHSFDVLSAKGHKIPNILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFR 369

Query: 953  SDAADIAKDLRTDVEELKKQYERLGCKIVNENSVLLATLPVPLKLPGLSRSSK 1111
            +D  DIAKDL  ++  +++ YE LGCKI  + ++  ATLPVPLK P L +  +
Sbjct: 370  TDYTDIAKDLSMNILPVRQLYEHLGCKISRQKNIFYATLPVPLKFPELRQRKR 422


>ref|XP_002884998.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330838|gb|EFH61257.1| DNA binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 443

 Score =  197 bits (501), Expect = 5e-48
 Identities = 107/239 (44%), Positives = 149/239 (62%), Gaps = 4/239 (1%)
 Frame = +2

Query: 407  KLESLPQKQDPISKKDLEKSLEDVKVNTKALKAAENTHAPNIPCYDMSASTPDKAYPLEK 586
            K  +L    D  ++K L+  L ++ VNT AL++  +T A NIP YD +A+T  +AYPLEK
Sbjct: 204  KKRALNMGDDAETQKFLDGKLGELDVNTAALESTSSTVARNIPPYDAAATTAKEAYPLEK 263

Query: 587  IIDKEAWDCLGDLL-NFSPGAKLTPDAYPIFVCNRVQKLEDIKDEHEKRTVAGVLQYITH 763
            II+K  W  L D+      G +   DAYP+FV NR+ KL DIKD+ +K+TV+G L  +TH
Sbjct: 264  IIEKGEWSFLEDIYWLLEQGTEAATDAYPVFVRNRLFKLRDIKDDMKKQTVSGALTLLTH 323

Query: 764  LIKYKD---MHSFDCKSVKNHKFPSIIEEKFRTLFNEXXXXXXXXXXXXXXINYVLVLTL 934
            L+K+KD   M+ FD  S KNHK P I   KF+++F +              I+YVLVL+L
Sbjct: 324  LVKFKDRNSMNGFD--SAKNHKMPDIFRRKFQSMFKDSESERIPVDKANLLISYVLVLSL 381

Query: 935  FVDGYQSDAADIAKDLRTDVEELKKQYERLGCKIVNENSVLLATLPVPLKLPGLSRSSK 1111
             VD +++D  DIAKDLR    EL+K +++LGCK V +NS  +ATLP PL  P ++R  K
Sbjct: 382  HVDNFKTDPEDIAKDLRISTVELRKHFQQLGCKFVKQNSTWVATLPTPLNFPEVNRRRK 440