BLASTX nr result

ID: Cnidium21_contig00010358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010358
         (1609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36846.3| unnamed protein product [Vitis vinifera]              433   e-119
ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...   431   e-118
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...   427   e-117
ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...   405   e-110
ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   397   e-108

>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  433 bits (1113), Expect = e-119
 Identities = 224/424 (52%), Positives = 290/424 (68%), Gaps = 3/424 (0%)
 Frame = -1

Query: 1606 KKEEKWCSFHHLVLSSLRHVAEIYDDILNTLHRFRPKFFVKSGGLPSYYDPYEFQHTCRL 1427
            K EE+WC+FH LV SSL HV+EIY+D+LN++HRFRPKF VKS G PSYY+PYEF+HTC +
Sbjct: 590  KIEEEWCTFHMLVQSSLNHVSEIYEDVLNSVHRFRPKFLVKSDGPPSYYEPYEFEHTCLI 649

Query: 1426 KCEHIDENGDVLDLYEDEHPDIVSDVQICTNEPFAVANSFVMDEVAANLANIIKEIRSIQ 1247
                   +GD     +D+  +  S+ + C   PF   N F  D +A  +A +IKEIR +Q
Sbjct: 650  TQL---PDGDT----DDDQFEPPSEARKCLAVPFVSPNQFQNDIIAEKMALVIKEIR-VQ 701

Query: 1246 FMDEMSSDQLNLETYDAPREVQEAALCRYFFSGNCNRGEQCIFSHSL---QAKKATCKFF 1076
            + ++ SS+Q  +          +A+ CR+F +G+CNRG +C FSHSL   + K  TCKFF
Sbjct: 702  YTEKNSSNQHKVVNDG------KASPCRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFF 755

Query: 1075 FSLQGCRNGASCYFSHDMGTSPSSRNGLSLCQPEEEVTDFSSLLHLFPTSSDGNILILDD 896
            FSLQGCRNG SC+FSHD+  S S  +G   C PE+   D   LL  FP +  G +L+LDD
Sbjct: 756  FSLQGCRNGDSCFFSHDLDPSVSEFSGSGECLPEDGDADAVLLLQFFPNALGGRVLVLDD 815

Query: 895  TDFRFSPNIARHYNASSIICTTSLAGDSINDPSLMGIKILSKLSDPYQTLINTEGESYIP 716
            TD  F+ N+A  +N   II TT L   SI DPSL  +KIL  L +PY+ +I+TEGE+ IP
Sbjct: 816  TDLHFTINLAHKFNPFKIISTTCLPNISICDPSLTAVKILWGLREPYKAIISTEGENPIP 875

Query: 715  WNQVKCVLWFPFSDGCGEDLEVEKGVLQTFFQSLAIRILADSLFEVQVILTMNNIRFSQL 536
            WN+V+C+LWFP  +  G +LE +K ++Q FF+ LA+RILAD++++VQVILTM NIRFSQL
Sbjct: 876  WNEVECILWFPNFESYGGNLEGQKNLIQKFFECLAVRILADAMYQVQVILTMKNIRFSQL 935

Query: 535  QTEKLGRDSFFFLKESFPYDESRFGALSDTVTVKKPMLVSKAVSYVFYLQPPGSIEYDSS 356
            Q EKLGRD FFFLK SFP+DES FG L+D VT KKPMLVS+A SYVF LQPP  I +   
Sbjct: 936  QVEKLGRDCFFFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNLQPPTDILFGDY 995

Query: 355  TTVF 344
             T F
Sbjct: 996  ATAF 999


>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1025

 Score =  431 bits (1109), Expect = e-118
 Identities = 218/424 (51%), Positives = 292/424 (68%), Gaps = 8/424 (1%)
 Frame = -1

Query: 1609 PKKEEKWCSFHHLVLSSLRHVAEIYDDILNTLHRFRPKFFVKSGGLPSYYDPYEFQHTCR 1430
            PK EE+WCSFH+LV SSL  V+EIY+DIL++LHRFRP+F  K  GLP+YYDPYEF H C 
Sbjct: 591  PKIEEEWCSFHNLVWSSLHQVSEIYEDILSSLHRFRPRFLGKCDGLPTYYDPYEFGHVCL 650

Query: 1429 LKCEHIDENGDVLDLY-EDEHPDIVSDVQICTNEPFAVANSFVMDEVAANLANIIKEIRS 1253
            LK +   +N D++ +  +DEH +  S+++ C   PF  +  F    VA  L  I+KE+  
Sbjct: 651  LKSQ---QNEDIVVVAADDEHQEPSSEIKKCCAVPFVDSGHFQTINVAEKLLTIVKEVNK 707

Query: 1252 I-------QFMDEMSSDQLNLETYDAPREVQEAALCRYFFSGNCNRGEQCIFSHSLQAKK 1094
            +           + S +       D     +EA LC YF +G+CN+G QC FSHSLQAKK
Sbjct: 708  LCTGNDSSYVNGDPSGNDAGYVNEDVSHVNEEAPLCVYFVNGSCNKGSQCSFSHSLQAKK 767

Query: 1093 ATCKFFFSLQGCRNGASCYFSHDMGTSPSSRNGLSLCQPEEEVTDFSSLLHLFPTSSDGN 914
              C++FF+LQGCRNG SC FSHD+G+S SS +    C PE++  +  SLL LFPTSSDG 
Sbjct: 768  PACRYFFTLQGCRNGESCSFSHDIGSSVSSCSPAP-CPPEDDDVNAVSLLQLFPTSSDGC 826

Query: 913  ILILDDTDFRFSPNIARHYNASSIICTTSLAGDSINDPSLMGIKILSKLSDPYQTLINTE 734
            IL+L+D+D  FS N A  Y+ S II TT ++  S+NDPSL G++IL +  DP +T+I+  
Sbjct: 827  ILLLEDSDLHFSLNFACFYDPSKIISTTCMSETSLNDPSLNGVRILWEFRDPCRTIISKA 886

Query: 733  GESYIPWNQVKCVLWFPFSDGCGEDLEVEKGVLQTFFQSLAIRILADSLFEVQVILTMNN 554
            G + IPW++VKC+LWFP      E+LE +K ++Q FF  LA RI+ADSL+E+++I+TMNN
Sbjct: 887  GRNLIPWSEVKCILWFPSFASQSENLEGQKILVQNFFDYLASRIIADSLYELRIIITMNN 946

Query: 553  IRFSQLQTEKLGRDSFFFLKESFPYDESRFGALSDTVTVKKPMLVSKAVSYVFYLQPPGS 374
            +RF+QLQ EKLGR+SFFFL ESFP+DE+ FG L+D V  +KPM  SKA+SYVF LQPP  
Sbjct: 947  VRFAQLQVEKLGRESFFFLGESFPFDEASFGELADGVRTRKPMPASKAISYVFDLQPPTD 1006

Query: 373  IEYD 362
            I++D
Sbjct: 1007 IQFD 1010


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
            vinifera]
          Length = 1014

 Score =  427 bits (1098), Expect = e-117
 Identities = 222/430 (51%), Positives = 289/430 (67%), Gaps = 9/430 (2%)
 Frame = -1

Query: 1606 KKEEKWCSFHHLVLSSLRHVAEIYDDILNTLHRFRPKFFVKSGGLPSYYDPYEFQHTCRL 1427
            K EE+WC+FH LV SSL HV+EIY+D+LN++HRFRPKF VKS G PSYY+PYEF+HTC +
Sbjct: 590  KIEEEWCTFHMLVQSSLNHVSEIYEDVLNSVHRFRPKFLVKSDGPPSYYEPYEFEHTCLI 649

Query: 1426 KCEHIDENGDVLDLYEDEHPDIVSDVQICTNEPFAVANSFVMDEVAANLANIIKEIRS-- 1253
                   +GD     +D+  +  S+ + C   PF   N F  D +A  +A +IKE+    
Sbjct: 650  TQL---PDGDT----DDDQFEPPSEARKCLAVPFVSPNQFQNDIIAEKMALVIKEVLLSC 702

Query: 1252 ----IQFMDEMSSDQLNLETYDAPREVQEAALCRYFFSGNCNRGEQCIFSHSL---QAKK 1094
                +Q+ ++ SS+Q  +          +A+ CR+F +G+CNRG +C FSHSL   + K 
Sbjct: 703  ASLVVQYTEKNSSNQHKVVNDG------KASPCRFFVNGSCNRGNKCPFSHSLPVNEVKG 756

Query: 1093 ATCKFFFSLQGCRNGASCYFSHDMGTSPSSRNGLSLCQPEEEVTDFSSLLHLFPTSSDGN 914
             TCKFFFSLQGCRNG SC+FSHD+  S S  +G   C PE+   D   LL  FP +  G 
Sbjct: 757  PTCKFFFSLQGCRNGDSCFFSHDLDPSVSEFSGSGECLPEDGDADAVLLLQFFPNALGGR 816

Query: 913  ILILDDTDFRFSPNIARHYNASSIICTTSLAGDSINDPSLMGIKILSKLSDPYQTLINTE 734
            +L+LDDTD  F+ N+A  +N   II TT L   SI DPSL  +KIL  L +PY+ +I+TE
Sbjct: 817  VLVLDDTDLHFTINLAHKFNPFKIISTTCLPNISICDPSLTAVKILWGLREPYKAIISTE 876

Query: 733  GESYIPWNQVKCVLWFPFSDGCGEDLEVEKGVLQTFFQSLAIRILADSLFEVQVILTMNN 554
            GE+ IPWN+V+C+LWFP  +  G +LE +K ++Q FF+ LA+RILAD++++VQVILTM N
Sbjct: 877  GENPIPWNEVECILWFPNFESYGGNLEGQKNLIQKFFECLAVRILADAMYQVQVILTMKN 936

Query: 553  IRFSQLQTEKLGRDSFFFLKESFPYDESRFGALSDTVTVKKPMLVSKAVSYVFYLQPPGS 374
            IRFSQLQ EKLGRD FFFLK SFP+DES FG L+D VT KKPMLVS+A SYVF LQPP  
Sbjct: 937  IRFSQLQVEKLGRDCFFFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNLQPPTD 996

Query: 373  IEYDSSTTVF 344
            I +    T F
Sbjct: 997  ILFGDYATAF 1006


>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355480579|gb|AES61782.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1035

 Score =  405 bits (1042), Expect = e-110
 Identities = 218/415 (52%), Positives = 273/415 (65%), Gaps = 6/415 (1%)
 Frame = -1

Query: 1606 KKEEKWCSFHHLVLSSLRHVAEIYDDILNTLHRFRPKFFVKSGGLPSYYDPYEFQHTCRL 1427
            K EE WC FH+L  SSL  ++EIY+DIL T+HRFRPKF     GL  YYDPYEF HTC  
Sbjct: 609  KLEEDWCFFHNLYQSSLHQMSEIYNDILYTIHRFRPKFLSSFHGLVPYYDPYEFSHTCLF 668

Query: 1426 KCEHIDENGDVLDLYEDEHPDIVSDVQICTNEPFAVANSFVMDEVAANLANIIKEIRSIQ 1247
            K +  D + DV+ + ++E  +  +  + C   P+   N     EVA   A I+KE R+ Q
Sbjct: 669  KSQP-DGHSDVVSV-DEEGFEPSNQTKKCVAVPYVTLNHLNSYEVAKMFAAIVKETRA-Q 725

Query: 1246 FMDEMSS------DQLNLETYDAPREVQEAALCRYFFSGNCNRGEQCIFSHSLQAKKATC 1085
            + D+ SS      D  N   Y       E + C YF  G+C+RG  C FSH+LQAK+  C
Sbjct: 726  YPDDSSSHPPEDADVGNFHVYG------EVSPCVYFMRGSCSRGNSCSFSHTLQAKRPQC 779

Query: 1084 KFFFSLQGCRNGASCYFSHDMGTSPSSRNGLSLCQPEEEVTDFSSLLHLFPTSSDGNILI 905
            KFFFSLQGCRNG SC FSHD+   P+     ++C+PE+   + +SLL+LFP SS+ +ILI
Sbjct: 780  KFFFSLQGCRNGGSCLFSHDVDR-PAVSARKNICRPEDNAMNSASLLNLFPKSSNRSILI 838

Query: 904  LDDTDFRFSPNIARHYNASSIICTTSLAGDSINDPSLMGIKILSKLSDPYQTLINTEGES 725
            LDDTD  FS   A HY+ S II TTSL+  +  +PSL G++IL  L  PYQT+I   G S
Sbjct: 839  LDDTDLHFSSCFACHYDPSKIISTTSLSETTFTEPSLTGVRILWGLYHPYQTIIAKAGRS 898

Query: 724  YIPWNQVKCVLWFPFSDGCGEDLEVEKGVLQTFFQSLAIRILADSLFEVQVILTMNNIRF 545
             IPWN+V+CVLWFP  D  GEDL+ +K  LQ FFQ LA RILAD L EVQVI+TMNNIRF
Sbjct: 899  LIPWNEVQCVLWFPCFDSYGEDLDGKKKALQNFFQYLAFRILADDLQEVQVIITMNNIRF 958

Query: 544  SQLQTEKLGRDSFFFLKESFPYDESRFGALSDTVTVKKPMLVSKAVSYVFYLQPP 380
            SQLQ EKL RD FF L ESF +DE  FG L D+VT ++PM+VS+++SYVF LQPP
Sbjct: 959  SQLQVEKLARDCFFILTESFAFDEISFGILHDSVTNRRPMVVSRSISYVFSLQPP 1013


>ref|XP_004152252.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 31-like [Cucumis sativus]
          Length = 998

 Score =  397 bits (1021), Expect = e-108
 Identities = 214/411 (52%), Positives = 272/411 (66%)
 Frame = -1

Query: 1606 KKEEKWCSFHHLVLSSLRHVAEIYDDILNTLHRFRPKFFVKSGGLPSYYDPYEFQHTCRL 1427
            K EE+WCSFH LV SSL HV+E+Y+DI++TLH+FRP+F      L S Y P +FQH C L
Sbjct: 580  KNEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSYAPTQFQHLCVL 639

Query: 1426 KCEHIDENGDVLDLYEDEHPDIVSDVQICTNEPFAVANSFVMDEVAANLANIIKEIRSIQ 1247
            KC    ENGD          D  S+ + C + P+  ++    ++VA  LA++IK+++   
Sbjct: 640  KCL---ENGD----------DQSSESRTCVSVPYVASSYSRTNQVAGKLADVIKQMKVFY 686

Query: 1246 FMDEMSSDQLNLETYDAPREVQEAALCRYFFSGNCNRGEQCIFSHSLQAKKATCKFFFSL 1067
              +E ++  L+  + +        +LC YF +G+CNRG QC+FSHSLQ+K+ATCKFFFSL
Sbjct: 687  AKEEPNNHSLS--SMNNGFNDNGTSLCVYFLNGSCNRGSQCLFSHSLQSKRATCKFFFSL 744

Query: 1066 QGCRNGASCYFSHDMGTSPSSRNGLSLCQPEEEVTDFSSLLHLFPTSSDGNILILDDTDF 887
            QGCRNG SC FSHD   S S     +LC PE+ +   S+L   FP S  G IL++DD  F
Sbjct: 745  QGCRNGDSCLFSHDQSPSKSLSFKSTLCLPEDGIAHASTLEKYFPKSG-GCILVMDDAGF 803

Query: 886  RFSPNIARHYNASSIICTTSLAGDSINDPSLMGIKILSKLSDPYQTLINTEGESYIPWNQ 707
             FS N+ARH   S IICTT+L+   I D SL   K + +LS P +T+I+  GE+ IPW  
Sbjct: 804  HFSSNLARHCEPSKIICTTNLSHSDIYDSSLNDAKKIWELSHPDETIISN-GENQIPWYD 862

Query: 706  VKCVLWFPFSDGCGEDLEVEKGVLQTFFQSLAIRILADSLFEVQVILTMNNIRFSQLQTE 527
            VKC+LWFP      E+L++EK +LQ FF  LAIRILAD+L  VQVILTMNNIRFSQLQ E
Sbjct: 863  VKCILWFPRFASSKENLDIEKILLQNFFDLLAIRILADALHGVQVILTMNNIRFSQLQVE 922

Query: 526  KLGRDSFFFLKESFPYDESRFGALSDTVTVKKPMLVSKAVSYVFYLQPPGS 374
            KLGR+SFFFL ESFPYDE  FG L D +T KK ML SK VSYVF L+PP S
Sbjct: 923  KLGRESFFFLSESFPYDERSFGELPDKITTKKGMLTSKPVSYVFDLRPPSS 973


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