BLASTX nr result

ID: Cnidium21_contig00010357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010357
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]      270   3e-70
gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]      204   2e-50
emb|CBI27170.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
gb|ABK95033.1| unknown [Populus trichocarpa]                           96   1e-17

>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score =  270 bits (690), Expect = 3e-70
 Identities = 134/178 (75%), Positives = 149/178 (83%)
 Frame = +2

Query: 125 MDQLNQSQQIIASCVGDLEGLKDNNVLSCAAVLSAKELSIVWGSFPLYWKTVSETRPNSQ 304
           M QLN S +II SC  DLEGLK N   SCAAVLSAKELSIVWGS   YW T +ET PNS 
Sbjct: 1   MAQLNSSHEIINSCARDLEGLKQNIAQSCAAVLSAKELSIVWGSDSRYWTTATETAPNSN 60

Query: 305 QSLDAFELNEVCWLQINGKYAASKLSQGVRYGVYYIVKLKNNLFMNGKVTLKLTRPDGRT 484
           QS+D  EL EVCWLQI+GKY+ASKL+QGV+YGVY+IVKLK NL +NGKVTLKLTRPDGRT
Sbjct: 61  QSVDVSELIEVCWLQIDGKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTRPDGRT 120

Query: 485 VVTREDLQKFSKNTWVGVKVGEFTTNARTCNRIVKFSMNGSDGTTWKTGLIVIGAVIV 658
           VVTR+DL K  KNTWV +KVGEF TNARTC+R VKFSMNG DGT+WK+GL+VIGAVIV
Sbjct: 121 VVTRDDLDKRPKNTWVALKVGEFMTNARTCHRNVKFSMNGCDGTSWKSGLVVIGAVIV 178


>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score =  204 bits (519), Expect = 2e-50
 Identities = 104/173 (60%), Positives = 126/173 (72%)
 Frame = +2

Query: 140 QSQQIIASCVGDLEGLKDNNVLSCAAVLSAKELSIVWGSFPLYWKTVSETRPNSQQSLDA 319
           Q   I++      + LKD +  SCAAVL+AKELSIVWGS P YWK VS+T P + ++LDA
Sbjct: 5   QRDDIVSLWTQGFQALKDKS--SCAAVLTAKELSIVWGSDPRYWKWVSKTSPVNFEALDA 62

Query: 320 FELNEVCWLQINGKYAASKLSQGVRYGVYYIVKLKNNLFMNGKVTLKLTRPDGRTVVTRE 499
            EL EVCWLQI+G Y A  L++GV+YGVY++V+L +N  MNG VTLKLTRP+G     +E
Sbjct: 63  AELIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTRPNGSPEEHKE 122

Query: 500 DLQKFSKNTWVGVKVGEFTTNARTCNRIVKFSMNGSDGTTWKTGLIVIGAVIV 658
           DLQ   +N WVG+KVGEFT  A  C+  VKFSMNG DGTTWKTGL VIGA IV
Sbjct: 123 DLQTKPRNKWVGLKVGEFTNTASGCDNTVKFSMNGCDGTTWKTGLTVIGAAIV 175


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  101 bits (252), Expect = 2e-19
 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = +2

Query: 218 VLSAKELSIVWGSFPLYWKTVSETRPNSQQSLDAFELNEVCWLQINGKYAASKLSQGVRY 397
           ++ A+ LSI W     YW  + + +  S   +D  EL  VCWL+++GK+  +KLS G+ Y
Sbjct: 91  MIFARNLSITWAEDSRYWHWL-KIKETSDVFVDVAELINVCWLEVHGKFETAKLSPGIMY 149

Query: 398 GVYYIVKLKNNLFMNG-KVTLKLTRPDGRTVVTREDLQKFSKNTWVGVKVGEFTTNARTC 574
            V ++V +K+  +  G  V LKL  PDG T   +E+L++  K  W+ + VG+F T+A   
Sbjct: 150 KVAFVVMMKDPAYGWGVPVNLKLALPDGNTQEHKENLREKPKGQWIEIPVGQFQTSAENI 209

Query: 575 NRIVKFSMNGSDGTTWKTGLIVIGAVI 655
             I +FS+   +G  WK+GL+V G +I
Sbjct: 210 GEI-EFSLFEYEGGDWKSGLVVKGVII 235


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
 Frame = +2

Query: 218 VLSAKELSIVWGSFPLYWKTVSETRPNSQQSLDAFELNEVCWLQINGKYAASKLSQGVRY 397
           +L AK+LSI WG    YWK  S    +   ++D  EL +VCWL+I GK+    LS G+ Y
Sbjct: 132 MLFAKDLSITWGGDARYWKWPSICE-SGDVTVDVAELLDVCWLEIYGKFNTKMLSPGILY 190

Query: 398 GVYYIVKLKNNLFMNG-KVTLKLTRPDGRTVVTREDLQKFSKNTWVGVKVGEFTTNARTC 574
            V +++KLK+  +  G  V + L  P+G     +E LQ   +  W+ V VGEF T+    
Sbjct: 191 EVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVGEFITSPENV 250

Query: 575 NRIVKFSMNGSDGTTWKTGLIVIGAVI 655
             I +F M+  DG  WK GL++ G  I
Sbjct: 251 GEI-QFGMHEYDGGEWKRGLVIKGIAI 276


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 218 VLSAKELSIVWGSFPLYWKTVSETRPNSQQSLDAFELNEVCWLQINGKYAASKLSQGVRY 397
           +L AK+LSI WG    YWK  S    +   ++D  EL +VCWL+I GK+    LS G+ Y
Sbjct: 132 MLFAKDLSITWGGDTRYWKWPSICE-SGDVTVDVAELLDVCWLEIYGKFNTKMLSPGILY 190

Query: 398 GVYYIVKLKNNLFMNG-KVTLKLTRPDGRTVVTREDLQKFSKNTWVGVKVGEFTTNARTC 574
            V +++KLK+  +  G  V + L  P+G     +E LQ   +  W+ V VGE  T+    
Sbjct: 191 EVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVGELITSPENV 250

Query: 575 NRIVKFSMNGSDGTTWKTGLIVIGAVI 655
             I +F M+  DG  WK GL++ G  I
Sbjct: 251 GEI-QFGMHEYDGGEWKRGLVIKGIAI 276


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