BLASTX nr result
ID: Cnidium21_contig00010346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010346
(1727 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31778.3| unnamed protein product [Vitis vinifera] 648 0.0
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 648 0.0
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera] 642 0.0
ref|XP_002883355.1| hypothetical protein ARALYDRAFT_479746 [Arab... 612 e-173
ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 611 e-172
>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 648 bits (1672), Expect = 0.0
Identities = 330/445 (74%), Positives = 369/445 (82%), Gaps = 12/445 (2%)
Frame = -1
Query: 1406 GFLNFRV----------SFGLSQAVRXXXXXXXXXXVKKGGSGNDEGLEISKLGISSEIV 1257
GF FRV F S R +K G DEGLEISKLGI+ EIV
Sbjct: 68 GFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIV 127
Query: 1256 YALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIRFNAKHGQG 1077
ALA KGITKLFPIQ+AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHG+G
Sbjct: 128 SALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRG 187
Query: 1076 RNPLAICLAPTRELARQLNKEFCESAPNLETLCCYGGVPISTQMQKLYRGIDIVVGTPGR 897
RNPLA+ LAPTRELARQ+ KEFCESAPNL+TLC YGG PIS QM L G+D+VVGTPGR
Sbjct: 188 RNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYGVDVVVGTPGR 247
Query: 896 VIDLIKRRVLDLSEVQFVVLDEADQMLNVGFAEDVETILENLPQEHQTMMFSATMPSWIV 717
+IDLIKR L+LSEVQFVVLDEADQML VGF EDVE ILE LPQ Q+MMFSATMPSWI
Sbjct: 248 IIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIR 307
Query: 716 KLSQKFLNNPLTIDLVGDSDQKLAEGITLYSIVSDMHERPEIIGPLITEHAKGGKCIVFT 537
KL+QK+L NPLTIDLVGDSDQKLAEGI+LYSI S+M+E+ I+GPLITEHAKGGKCIVFT
Sbjct: 308 KLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHAKGGKCIVFT 367
Query: 536 QTKRDADRLAYSMQRNFPCEALHGDHSQNQRERTLSGFCNGEFNILVATDVAARGLDVPN 357
QTKRDADRLAY+M RNF CEALHGD SQ+QRERTLSGF +G FN+LVATDVAARGLD+PN
Sbjct: 368 QTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPN 427
Query: 356 VDLVIHFELPNTSEMFVHRSGRTGRAGKKGSAILIYSSEQSRDVKGIERQVGCKFAELPR 177
VDL+IH+ELPN+SE+FVHRSGRTGRAGKKG+AILIY+ +Q+R V+ IER +GCKF+ELPR
Sbjct: 428 VDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPR 487
Query: 176 IEVESGSGDMFRDT--GNVGGRFGS 108
I +E GS DMF D G GGRFGS
Sbjct: 488 IAIEGGSRDMFSDMGGGGDGGRFGS 512
>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
vinifera]
Length = 666
Score = 648 bits (1672), Expect = 0.0
Identities = 330/445 (74%), Positives = 369/445 (82%), Gaps = 12/445 (2%)
Frame = -1
Query: 1406 GFLNFRV----------SFGLSQAVRXXXXXXXXXXVKKGGSGNDEGLEISKLGISSEIV 1257
GF FRV F S R +K G DEGLEISKLGI+ EIV
Sbjct: 68 GFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIV 127
Query: 1256 YALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIRFNAKHGQG 1077
ALA KGITKLFPIQ+AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHG+G
Sbjct: 128 SALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRG 187
Query: 1076 RNPLAICLAPTRELARQLNKEFCESAPNLETLCCYGGVPISTQMQKLYRGIDIVVGTPGR 897
RNPLA+ LAPTRELARQ+ KEFCESAPNL+TLC YGG PIS QM L G+D+VVGTPGR
Sbjct: 188 RNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYGVDVVVGTPGR 247
Query: 896 VIDLIKRRVLDLSEVQFVVLDEADQMLNVGFAEDVETILENLPQEHQTMMFSATMPSWIV 717
+IDLIKR L+LSEVQFVVLDEADQML VGF EDVE ILE LPQ Q+MMFSATMPSWI
Sbjct: 248 IIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIR 307
Query: 716 KLSQKFLNNPLTIDLVGDSDQKLAEGITLYSIVSDMHERPEIIGPLITEHAKGGKCIVFT 537
KL+QK+L NPLTIDLVGDSDQKLAEGI+LYSI S+M+E+ I+GPLITEHAKGGKCIVFT
Sbjct: 308 KLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHAKGGKCIVFT 367
Query: 536 QTKRDADRLAYSMQRNFPCEALHGDHSQNQRERTLSGFCNGEFNILVATDVAARGLDVPN 357
QTKRDADRLAY+M RNF CEALHGD SQ+QRERTLSGF +G FN+LVATDVAARGLD+PN
Sbjct: 368 QTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPN 427
Query: 356 VDLVIHFELPNTSEMFVHRSGRTGRAGKKGSAILIYSSEQSRDVKGIERQVGCKFAELPR 177
VDL+IH+ELPN+SE+FVHRSGRTGRAGKKG+AILIY+ +Q+R V+ IER +GCKF+ELPR
Sbjct: 428 VDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPR 487
Query: 176 IEVESGSGDMFRDT--GNVGGRFGS 108
I +E GS DMF D G GGRFGS
Sbjct: 488 IAIEGGSRDMFSDMGGGGDGGRFGS 512
>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
Length = 666
Score = 642 bits (1656), Expect = 0.0
Identities = 328/445 (73%), Positives = 367/445 (82%), Gaps = 12/445 (2%)
Frame = -1
Query: 1406 GFLNFRV----------SFGLSQAVRXXXXXXXXXXVKKGGSGNDEGLEISKLGISSEIV 1257
GF FRV F S R +K G DEGLEISKLGI+ EIV
Sbjct: 68 GFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIV 127
Query: 1256 YALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIRFNAKHGQG 1077
ALA KGITKLFPIQ+AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHG+G
Sbjct: 128 SALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRG 187
Query: 1076 RNPLAICLAPTRELARQLNKEFCESAPNLETLCCYGGVPISTQMQKLYRGIDIVVGTPGR 897
RNPLA+ LAPTRELARQ+ KEF ESAPNL+TLC YGG PIS QM L G+D+VVGTPGR
Sbjct: 188 RNPLALVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNSLDYGVDVVVGTPGR 247
Query: 896 VIDLIKRRVLDLSEVQFVVLDEADQMLNVGFAEDVETILENLPQEHQTMMFSATMPSWIV 717
+IDLIKR L+LSEVQFVVLDEADQML VGF EDVE ILE LPQ Q+MMFSATMPSWI
Sbjct: 248 IIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIR 307
Query: 716 KLSQKFLNNPLTIDLVGDSDQKLAEGITLYSIVSDMHERPEIIGPLITEHAKGGKCIVFT 537
KL+QK+L NPLTIDLVGDSDQKLAEGI+LYSI S+M+E+ I+GPLITEHAKGGKCIVFT
Sbjct: 308 KLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHAKGGKCIVFT 367
Query: 536 QTKRDADRLAYSMQRNFPCEALHGDHSQNQRERTLSGFCNGEFNILVATDVAARGLDVPN 357
QTKRDADRLAY+M RNF CEALHGD SQ+QRERTLSGF +G FN+LVATDVAARGLD+PN
Sbjct: 368 QTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPN 427
Query: 356 VDLVIHFELPNTSEMFVHRSGRTGRAGKKGSAILIYSSEQSRDVKGIERQVGCKFAELPR 177
VDL+IH+ELPN+SE+FVHRSGRTGRAGKKG+AILIY+ +Q+R V+ IER +GCKF+ELPR
Sbjct: 428 VDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPR 487
Query: 176 IEVESGSGDMFRDT--GNVGGRFGS 108
I +E GS DM D G GGRFGS
Sbjct: 488 IAIEGGSRDMLSDMGGGGDGGRFGS 512
>ref|XP_002883355.1| hypothetical protein ARALYDRAFT_479746 [Arabidopsis lyrata subsp.
lyrata] gi|297329195|gb|EFH59614.1| hypothetical protein
ARALYDRAFT_479746 [Arabidopsis lyrata subsp. lyrata]
Length = 612
Score = 612 bits (1578), Expect = e-173
Identities = 331/515 (64%), Positives = 392/515 (76%), Gaps = 7/515 (1%)
Frame = -1
Query: 1634 MNTLVKSSLF--SKRIKLASLTQQSFLILQHTHHLFSTDHFISGKAPQFSTFAGNQCSDV 1461
+ T+++ SL SKR ASLT + ++ H ++ A + S A SDV
Sbjct: 2 ITTVLRRSLLDASKRNLSASLTSINAVLFHH----------LAPAAARVSDLAVIGSSDV 51
Query: 1460 ---FINGAKSVPGVKRDFH-AGGFLNFRVSFGLSQAVRXXXXXXXXXXVKKGGSGNDEGL 1293
F++G K+ R+FH G L FR S V ++ G +GL
Sbjct: 52 KPGFLSGVKA-----REFHFESGPLEFRASM-----VSSAGFAISESSERRVGDSESDGL 101
Query: 1292 EISKLGISSEIVYALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 1113
IS+LGIS EIV AL+ KGI KLFPIQKAVLEPAM+GRDMIGRARTGTGKTLAFGIPI+D
Sbjct: 102 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 161
Query: 1112 KIIRFNAKHGQGRNPLAICLAPTRELARQLNKEFCESAPNLETLCCYGGVPISTQMQKLY 933
KII++NAKHG+GRNPL + LAPTRELARQ+ KEF ESAP+L+T+C YGG PI QM++L
Sbjct: 162 KIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLD 221
Query: 932 RGIDIVVGTPGRVIDLIKRRVLDLSEVQFVVLDEADQMLNVGFAEDVETILENLPQEHQT 753
G+D+ VGTPGRVIDL+KR L+LSEVQFVVLDEADQML VGFAEDVE ILE LP++ Q+
Sbjct: 222 YGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQS 281
Query: 752 MMFSATMPSWIVKLSQKFLNNPLTIDLVGDSDQKLAEGITLYSIVSDMHERPEIIGPLIT 573
MMFSATMPSWI L++K+LNNPLTIDLVGDSDQKLA+GIT YSI++D + R IIGPL+T
Sbjct: 282 MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITTYSILADSYGRASIIGPLVT 341
Query: 572 EHAKGGKCIVFTQTKRDADRLAYSMQRNFPCEALHGDHSQNQRERTLSGFCNGEFNILVA 393
EHAKGGKCIVFTQTKRDADRL+Y++ R+F CEALHGD SQ+QRERTL+GF +G FNILVA
Sbjct: 342 EHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVA 401
Query: 392 TDVAARGLDVPNVDLVIHFELPNTSEMFVHRSGRTGRAGKKGSAILIYSSEQSRDVKGIE 213
TDVAARGLDVPNVDL+IH+ELPN +E FVHR+GRTGRAGKKGSAILIYS +QSR VK IE
Sbjct: 402 TDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIE 461
Query: 212 RQVGCKFAELPRIEVESGSGDMFRDTGN-VGGRFG 111
R+VG +F ELP I VE GS MF G+ GG FG
Sbjct: 462 REVGSRFTELPSIAVERGSASMFEGIGSRSGGSFG 496
>ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max]
Length = 610
Score = 611 bits (1575), Expect = e-172
Identities = 313/444 (70%), Positives = 365/444 (82%), Gaps = 3/444 (0%)
Frame = -1
Query: 1430 VKRDFHAG-GFLNFRVSFGLSQAVRXXXXXXXXXXVKKGGSGN--DEGLEISKLGISSEI 1260
+ R FH+ G LNFR S + ++G GN DEGLEI+KLGIS +I
Sbjct: 40 ISRTFHSNTGPLNFR-----SSSCHRAEYAVDDFPYEEGSKGNAADEGLEIAKLGISEDI 94
Query: 1259 VYALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIRFNAKHGQ 1080
V ALAKKGITKLFPIQ+AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII+FNAKHG+
Sbjct: 95 VSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGR 154
Query: 1079 GRNPLAICLAPTRELARQLNKEFCESAPNLETLCCYGGVPISTQMQKLYRGIDIVVGTPG 900
GR+PLA+ LAPTRELARQ+ EFCESAPNL+T+C YGG PIS QM++L G+DI VGTPG
Sbjct: 155 GRDPLALVLAPTRELARQVETEFCESAPNLDTICVYGGTPISRQMRELDYGVDIAVGTPG 214
Query: 899 RVIDLIKRRVLDLSEVQFVVLDEADQMLNVGFAEDVETILENLPQEHQTMMFSATMPSWI 720
R+IDL+ R L+L +VQFVVLDEADQML VGF EDVE ILE LP + QT+MFSATMPSWI
Sbjct: 215 RIIDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWI 274
Query: 719 VKLSQKFLNNPLTIDLVGDSDQKLAEGITLYSIVSDMHERPEIIGPLITEHAKGGKCIVF 540
++S+ +LNNPLTIDLVGDSDQKLA+GI+LYSI +D++ + I+ PLITEHAKGGKCIVF
Sbjct: 275 KQISRNYLNNPLTIDLVGDSDQKLADGISLYSIATDLYVKAGILAPLITEHAKGGKCIVF 334
Query: 539 TQTKRDADRLAYSMQRNFPCEALHGDHSQNQRERTLSGFCNGEFNILVATDVAARGLDVP 360
TQTKRDADRL+Y+M R+ CEALHGD SQ QRE+TL+GF NG FN+LVATDVA+RGLD+P
Sbjct: 335 TQTKRDADRLSYTMARSVKCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIP 394
Query: 359 NVDLVIHFELPNTSEMFVHRSGRTGRAGKKGSAILIYSSEQSRDVKGIERQVGCKFAELP 180
NVDLVIH++LPN SE+FVHRSGRTGRAGKKG+AIL+Y+ +QSR VK IER VG +F ELP
Sbjct: 395 NVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKLIERDVGSRFTELP 454
Query: 179 RIEVESGSGDMFRDTGNVGGRFGS 108
RI V+S S DM G GGRFGS
Sbjct: 455 RIAVDSASVDMVGGMG--GGRFGS 476