BLASTX nr result

ID: Cnidium21_contig00010328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010328
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Rici...   166   2e-39
ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like...   160   8e-38
ref|XP_003533659.1| PREDICTED: RING-H2 finger protein ATL73-like...   157   7e-37
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   156   1e-36

>ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|222867703|gb|EEF04834.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  176 bits (445), Expect = 2e-42
 Identities = 84/133 (63%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = -3

Query: 470 NSIIRCLLRCTHRFGTETPQQAAARLATTGVKKHTLRKIPIAIYGSEVKFSSSECPICLA 291
           NSI+RCLLRC+ RF  ET ++AAARLA TG+KK  LR+IP+AIYG+    S++ECPICL 
Sbjct: 53  NSIVRCLLRCSSRFALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLG 112

Query: 290 EFVQGEKVRVLPKCSHGFHVKCIDTWLESHSSCPNCRRSLLERSTSRVADESC--VTQPP 117
           EFV GEKVRVLPKC+HGFHV+CIDTWL SHSSCPNCR SLLE +T   A +      +P 
Sbjct: 113 EFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEHTTDSGAAQEVTGAARPG 172

Query: 116 ESNSSRQQQASTV 78
           E++  RQ   STV
Sbjct: 173 ENDPGRQGNVSTV 185


>ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Ricinus communis]
           gi|223531856|gb|EEF33673.1| RING-H2 finger protein
           ATL5A, putative [Ricinus communis]
          Length = 186

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/131 (59%), Positives = 96/131 (73%)
 Frame = -3

Query: 470 NSIIRCLLRCTHRFGTETPQQAAARLATTGVKKHTLRKIPIAIYGSEVKFSSSECPICLA 291
           NSI+RC LRC+ RF  ETP+Q AARLA  G+KK  LR+IP+A+YG+EV   ++ECPICL 
Sbjct: 54  NSIVRCALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPVAVYGTEVSIPATECPICLG 113

Query: 290 EFVQGEKVRVLPKCSHGFHVKCIDTWLESHSSCPNCRRSLLERSTSRVADESCVTQPPES 111
           EF+ GEKVR+LPKC+HGFHV+CIDTWL SHSSCPNCR SLL    S  A E    +  E+
Sbjct: 114 EFLDGEKVRLLPKCNHGFHVRCIDTWLLSHSSCPNCRLSLL---XSGAAQEESGRRQGEN 170

Query: 110 NSSRQQQASTV 78
           +  RQ+    V
Sbjct: 171 SPGRQRNVIVV 181


>ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/133 (57%), Positives = 94/133 (70%)
 Frame = -3

Query: 470 NSIIRCLLRCTHRFGTETPQQAAARLATTGVKKHTLRKIPIAIYGSEVKFSSSECPICLA 291
           NSI+RC +RC+ R   E+  QAA     TG+KK  LR+IP+A+YG  V+  ++ECPICL 
Sbjct: 64  NSIVRCAMRCSRRLSPESQGQAA-----TGLKKRALRQIPVAVYGPGVEIPATECPICLG 118

Query: 290 EFVQGEKVRVLPKCSHGFHVKCIDTWLESHSSCPNCRRSLLERSTSRVADESCVTQPPES 111
           EFVQGEKVRVLPKC+HGFHV+CIDTWL SHSSCPNCR SLLER T+  A      + P+ 
Sbjct: 119 EFVQGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLERPTTSDAAGEVAPEQPQP 178

Query: 110 NSSRQQQASTVNV 72
           N S  Q +  + V
Sbjct: 179 NGSTHQGSIVIAV 191


>ref|XP_003533659.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max]
          Length = 185

 Score =  157 bits (398), Expect = 7e-37
 Identities = 81/140 (57%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
 Frame = -3

Query: 470 NSIIRCLLRCTHRFGTETPQQAAARLATTGVKKHTLRKIPIAIYGS---EVKFSSSECPI 300
           NSI RC LRC  RFG ET +QAAARLA TG+K+  L +IP+A+YG+   E    ++ECPI
Sbjct: 57  NSIARCALRCGRRFGDETAEQAAARLAGTGLKRRELSRIPVAVYGAAGGENTIPATECPI 116

Query: 299 CLAEFVQGEKVRVLPKCSHGFHVKCIDTWLESHSSCPNCRRSLLERSTSRVADESCVTQP 120
           CL EF +G+KVR+LPKC+HGFHV+CIDTWL SHSSCPNCR SLLE++++           
Sbjct: 117 CLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEKTSA----------A 166

Query: 119 PESNSSRQQQASTVNVVVAQ 60
           PES S R+   S V VVV Q
Sbjct: 167 PESGSGRR---SEVVVVVEQ 183


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
 Frame = -3

Query: 470 NSIIRCLLRCTHRFGTETPQQAAARLATTGVKKHTLRKIPIAIYGS-EVKFSSSECPICL 294
           NSI+RC LRC+ RF  ETP++ AARL   G+KK  L +IPI +YGS     ++++CPICL
Sbjct: 57  NSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICL 116

Query: 293 AEFVQGEKVRVLPKCSHGFHVKCIDTWLESHSSCPNCRRSLLERST 156
            EFV GEKVRVLPKC+HGFHV+CIDTWL SHSSCPNCR+SLLE  T
Sbjct: 117 GEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRQSLLEHPT 162


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