BLASTX nr result

ID: Cnidium21_contig00010325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010325
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314589.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002311758.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002314589.1| predicted protein [Populus trichocarpa] gi|222863629|gb|EEF00760.1|
           predicted protein [Populus trichocarpa]
          Length = 522

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   SRVDKVRNWAMLKKRMNSFDRGG-SKYAALGGSGGNDGFSRDDEVHNWAVGKK 157
           SR D+V NWAM KK   SFD G  S+Y++LGG GG+ G SR DEV NWAV KK
Sbjct: 154 SRADEVDNWAMAKKPQPSFDSGRQSRYSSLGGGGGDGGGSRADEVDNWAVDKK 206


>ref|XP_002311758.1| predicted protein [Populus trichocarpa] gi|222851578|gb|EEE89125.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 53/155 (34%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
 Frame = +2

Query: 2   SRVDKVRNWAMLKKRMNSFDRGG-SKYAALGGSGGNDGF----------SRDDEVHNWAV 148
           SR D+V NWAM KK + S+D G  S+Y +LGG GG  G           SR DEV NWAV
Sbjct: 154 SRADEVDNWAMDKKPLPSYDSGRQSRYGSLGGGGGGGGGGGGGGGFGGGSRADEVDNWAV 213

Query: 149 GKKQNVVGAPPVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQQRRCGLMSDAQ 328
           GKK                                           E ++ R  L+ D  
Sbjct: 214 GKK--------------PLPTPSSTFGSGFRDSGPDPDRQSRGGYREPERERPRLVFD-- 257

Query: 329 SERGEGGVALQQGVMKAKVNLFGDSKPREVLLEEK 433
           S RGE GV   + V   + N FG ++PRE +L EK
Sbjct: 258 SPRGEVGV--NEPVKLDRPNPFGTARPREDVLAEK 290


Top