BLASTX nr result
ID: Cnidium21_contig00010303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010303
(636 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16596.3| unnamed protein product [Vitis vinifera] 268 5e-70
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 262 4e-68
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi... 260 2e-67
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi... 260 2e-67
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 242 4e-62
>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
Length = 2452
Score = 268 bits (686), Expect = 5e-70
Identities = 140/221 (63%), Positives = 158/221 (71%), Gaps = 10/221 (4%)
Frame = +2
Query: 2 RHSRDRKQAIGHSAASREEYNLLDSVEPDPVGFRDQVSMLFAEWYRICELPGPKDAASAR 181
R SRD+K I HSAA+REE+N + VE DP GFR+QVS LF EWYRICELPG DAA A
Sbjct: 1882 RQSRDKKAPI-HSAATREEHNNGEPVEQDPTGFREQVSKLFVEWYRICELPGTNDAACAH 1940
Query: 182 YVLQLLQSGLLKGDDISDRFFRLLMEISVSHCL----------QSHQQTQPLSFLAIDIY 331
YVLQL Q+GLLKG+ ISDRFF LLMEIS SHCL QSHQQ +SF AIDI+
Sbjct: 1941 YVLQLHQNGLLKGEHISDRFFHLLMEISFSHCLSSEAIITGPLQSHQQVHSMSFFAIDIF 2000
Query: 332 AALVFSILRFCPVDQGXXXXXXXXXXXXXXXRIIYKDAEEKNSSFNPRPYFRLFINWLLD 511
+ LVFSIL++ PVDQG R I KDAEEK +SFNPRPYFR FINWL +
Sbjct: 2001 SNLVFSILKYSPVDQGFSKFNLISKILAVTVRFIQKDAEEKKTSFNPRPYFRFFINWLSE 2060
Query: 512 LTTLEPVSDGVNLQVLIALANAFHALQPLKVPAFCYAWLEL 634
L + +PV DG N QVLI ANAFHALQPLK+PAF +AWLEL
Sbjct: 2061 LGSPDPVFDGANFQVLITFANAFHALQPLKIPAFSFAWLEL 2101
>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
max]
Length = 2424
Score = 262 bits (669), Expect = 4e-68
Identities = 138/222 (62%), Positives = 162/222 (72%), Gaps = 11/222 (4%)
Frame = +2
Query: 2 RHSRDRKQAIGHSAASREEYNLLDSVEPDPVGFRDQVSMLFAEWYRICELPGPKDAASAR 181
R SRD K + A+REE+N +DS+EPDP GFR+QVSMLF EWYRICELPG D AS
Sbjct: 1859 RQSRDNK--VIRKTANREEFNSVDSIEPDPAGFREQVSMLFTEWYRICELPGGYDTASTH 1916
Query: 182 YVLQLLQSGLLKGDDISDRFFRLLMEISVSHCLQSHQ------QTQPL---SFLAIDIYA 334
+ LQL Q+GLLKGDD++DRFFRLLME++V+HCL + Q+QPL SFLAI+IYA
Sbjct: 1917 FTLQLHQNGLLKGDDLTDRFFRLLMELAVAHCLSTEMINSGSLQSQPLQTMSFLAIEIYA 1976
Query: 335 ALVFSILRFCP--VDQGXXXXXXXXXXXXXXXRIIYKDAEEKNSSFNPRPYFRLFINWLL 508
LVFSIL+ ++QG R I KDAEEK +SFNPRP FRLFINWLL
Sbjct: 1977 KLVFSILKLFGWLLEQGSNKLFLLSKILAVTVRFIIKDAEEKKASFNPRPLFRLFINWLL 2036
Query: 509 DLTTLEPVSDGVNLQVLIALANAFHALQPLKVPAFCYAWLEL 634
DL +LEPV+DG NLQ+L A ANAFHALQPLKVPAF +AWLEL
Sbjct: 2037 DLGSLEPVTDGANLQILTAFANAFHALQPLKVPAFSFAWLEL 2078
>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520705|gb|AET01159.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2410
Score = 260 bits (664), Expect = 2e-67
Identities = 139/221 (62%), Positives = 156/221 (70%), Gaps = 10/221 (4%)
Frame = +2
Query: 2 RHSRDRKQAIGHSAASREEYNLLDSVEPDPVGFRDQVSMLFAEWYRICELPGPKDAASAR 181
R SRD K G A+RE N++DSVEPDP GFR+QVSMLFAEWYRICELPG D AS
Sbjct: 1846 RQSRDNKGP-GLQVANREALNIVDSVEPDPAGFREQVSMLFAEWYRICELPGANDTASTH 1904
Query: 182 YVLQLLQSGLLKGDDISDRFFRLLMEISVSHC----------LQSHQQTQPLSFLAIDIY 331
+++QL QSGLLKGDD+ DRFFRLLMEI+V+HC LQS QQ +SFLAIDIY
Sbjct: 1905 FIVQLHQSGLLKGDDMPDRFFRLLMEIAVAHCLSTEGINSGALQSPQQMPTMSFLAIDIY 1964
Query: 332 AALVFSILRFCPVDQGXXXXXXXXXXXXXXXRIIYKDAEEKNSSFNPRPYFRLFINWLLD 511
A LVFSIL+ R I KDAEEK SFNPRP+FRLFINWLLD
Sbjct: 1965 AKLVFSILK--------GSSKLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLD 2016
Query: 512 LTTLEPVSDGVNLQVLIALANAFHALQPLKVPAFCYAWLEL 634
L +LEPV+DG NLQ+L A ANAFHALQPLKVP F +AWLEL
Sbjct: 2017 LGSLEPVTDGANLQILTAFANAFHALQPLKVPGFSFAWLEL 2057
>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520704|gb|AET01158.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2418
Score = 260 bits (664), Expect = 2e-67
Identities = 139/221 (62%), Positives = 156/221 (70%), Gaps = 10/221 (4%)
Frame = +2
Query: 2 RHSRDRKQAIGHSAASREEYNLLDSVEPDPVGFRDQVSMLFAEWYRICELPGPKDAASAR 181
R SRD K G A+RE N++DSVEPDP GFR+QVSMLFAEWYRICELPG D AS
Sbjct: 1846 RQSRDNKGP-GLQVANREALNIVDSVEPDPAGFREQVSMLFAEWYRICELPGANDTASTH 1904
Query: 182 YVLQLLQSGLLKGDDISDRFFRLLMEISVSHC----------LQSHQQTQPLSFLAIDIY 331
+++QL QSGLLKGDD+ DRFFRLLMEI+V+HC LQS QQ +SFLAIDIY
Sbjct: 1905 FIVQLHQSGLLKGDDMPDRFFRLLMEIAVAHCLSTEGINSGALQSPQQMPTMSFLAIDIY 1964
Query: 332 AALVFSILRFCPVDQGXXXXXXXXXXXXXXXRIIYKDAEEKNSSFNPRPYFRLFINWLLD 511
A LVFSIL+ R I KDAEEK SFNPRP+FRLFINWLLD
Sbjct: 1965 AKLVFSILK--------GSSKLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLD 2016
Query: 512 LTTLEPVSDGVNLQVLIALANAFHALQPLKVPAFCYAWLEL 634
L +LEPV+DG NLQ+L A ANAFHALQPLKVP F +AWLEL
Sbjct: 2017 LGSLEPVTDGANLQILTAFANAFHALQPLKVPGFSFAWLEL 2057
>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 1-like [Cucumis sativus]
Length = 2427
Score = 242 bits (618), Expect = 4e-62
Identities = 132/222 (59%), Positives = 153/222 (68%), Gaps = 11/222 (4%)
Frame = +2
Query: 2 RHSRDRKQAIGHSAASREEYNLLDSVEPDPVGFRDQVSMLFAEWYRICELPGPKDAASAR 181
R +RD+K + S +RE+ ++L+S DP GFRDQVS+LFAEWYRICELPG +AA
Sbjct: 1864 RLARDKKAPVP-SITNREDSSILES--EDPAGFRDQVSILFAEWYRICELPGANEAAFNH 1920
Query: 182 YVLQLLQSGLLKGDDISDRFFRLLMEISVSHCLQSH-----------QQTQPLSFLAIDI 328
++LQL Q+GLLKGDD++DRFFRLL EISV+HCL S QQ Q LSFLAIDI
Sbjct: 1921 FILQLHQNGLLKGDDMTDRFFRLLTEISVAHCLSSEVINSGALQSSPQQIQNLSFLAIDI 1980
Query: 329 YAALVFSILRFCPVDQGXXXXXXXXXXXXXXXRIIYKDAEEKNSSFNPRPYFRLFINWLL 508
YA LVFSIL+ G R I KDAEEK SFNPRPYFRLFINWL
Sbjct: 1981 YAKLVFSILK------GSGKTALLSRILAVTVRFIQKDAEEKKGSFNPRPYFRLFINWLP 2034
Query: 509 DLTTLEPVSDGVNLQVLIALANAFHALQPLKVPAFCYAWLEL 634
DL +LEP+ DG N Q+L A ANAFHAL PLK+PAF YAWLEL
Sbjct: 2035 DLGSLEPIVDGANFQILTAFANAFHALHPLKIPAFSYAWLEL 2076