BLASTX nr result
ID: Cnidium21_contig00010292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010292
(1280 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun... 45 9e-09
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ... 43 5e-08
ref|XP_002303565.1| GRAS family transcription factor [Populus tr... 44 1e-07
ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [G... 42 7e-07
ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [C... 39 2e-06
>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
[Ricinus communis]
Length = 662
Score = 45.4 bits (106), Expect(3) = 9e-09
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Frame = +1
Query: 625 PFKFNLVVNRLENVSL*MRRGMCG------CIFLIAPTSY----------------YQPK 738
PF+F+ VV+RLE+V L M G C+F + T Y P
Sbjct: 450 PFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVFQMHKTLYDGNGGALRDFLGLIRSTSPT 509
Query: 739 FVILAEQEDEHDYNSLNAVVYSSSKYYNAI 828
V++AEQE EH+ +L A V +S KYY+AI
Sbjct: 510 IVLMAEQEAEHNATNLEARVCNSLKYYSAI 539
Score = 33.9 bits (76), Expect(3) = 9e-09
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +2
Query: 938 SDRLERHKCFGMWSKSME--GFGCIG 1009
SDRLERH+ F W K ME GF C+G
Sbjct: 574 SDRLERHESFEKWRKLMEQGGFRCMG 599
Score = 26.9 bits (58), Expect(3) = 9e-09
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 515 WLSFFESLTCRNNRLSHVCNTGI 583
W S F+SL R N SHV TGI
Sbjct: 404 WPSLFQSLASRTNPPSHVRITGI 426
>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
Length = 676
Score = 43.1 bits (100), Expect(3) = 5e-08
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Frame = +1
Query: 625 PFKFNLVVNRLENVSL*M------RRGMCGCIFLIAPTSY----------------YQPK 738
PF+F+ VV+RLE+V L M CIF + T Y P
Sbjct: 464 PFEFHPVVDRLEDVRLWMLHVKDKESVAVNCIFQLHKTLYDGSGGALRDFLGLIRSTNPS 523
Query: 739 FVILAEQEDEHDYNSLNAVVYSSSKYYNAI 828
V++AEQE EH+ SL V +S +YY+AI
Sbjct: 524 IVLMAEQEAEHNELSLETRVSNSLRYYSAI 553
Score = 32.7 bits (73), Expect(3) = 5e-08
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +2
Query: 938 SDRLERHKCFGMWSKSME--GFGCIG 1009
SDR+ERH+ F W + ME GF C+G
Sbjct: 588 SDRVERHESFEKWRRRMEQGGFRCVG 613
Score = 27.7 bits (60), Expect(3) = 5e-08
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Frame = +2
Query: 401 TAVRILKQITPVPQCFC*EELDERS*FTS*IYMFR-----------------D*AWLSFF 529
TA+R+L Q++P+P+ FTS + R W S F
Sbjct: 372 TALRLLNQVSPIPKFIH---------FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLF 422
Query: 530 ESLTCRNNRLSHVCNTGI 583
+SL R N SHV TG+
Sbjct: 423 QSLASRTNPPSHVRITGV 440
>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
gi|222840997|gb|EEE78544.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 665
Score = 44.3 bits (103), Expect(3) = 1e-07
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Frame = +1
Query: 625 PFKFNLVVNRLENVSL*M---RRGMC---GCIFLIAPTSY----------------YQPK 738
PF+F+ VV+RLE+V L M + C CIF + T Y P
Sbjct: 452 PFEFHPVVDRLEDVRLWMLHVKERECVAINCIFQMHKTLYDGSGGALRDFLGLIRSTNPT 511
Query: 739 FVILAEQEDEHDYNSLNAVVYSSSKYYNAI 828
V+LAEQE EH+ +L V +S KYY+AI
Sbjct: 512 IVLLAEQEAEHNAPNLETRVCNSLKYYSAI 541
Score = 30.4 bits (67), Expect(3) = 1e-07
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 938 SDRLERHKCFGMWSKSME--GFGCIG 1009
SDR ERH+ F W K ME G C+G
Sbjct: 576 SDRHERHESFDKWKKLMEQGGLRCVG 601
Score = 27.7 bits (60), Expect(3) = 1e-07
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +2
Query: 401 TAVRILKQITPVPQC--FC*EELDERS*FTS*IYMFRD*------AWLSFFESLTCRNNR 556
TA+R+L Q++P+P+ F E+ R+ D W S F+SL R N
Sbjct: 360 TALRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIRQGLQWPSLFQSLASRTNP 419
Query: 557 LSHVCNTGI 583
SHV TGI
Sbjct: 420 PSHVRITGI 428
>ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [Glycine max]
Length = 664
Score = 42.0 bits (97), Expect(3) = 7e-07
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 22/90 (24%)
Frame = +1
Query: 625 PFKFNLVVNRLENVSL*M------RRGMCGCIFLIAPTSY----------------YQPK 738
PF+F+ VV+RLE+V L M C+ + T Y P
Sbjct: 447 PFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPS 506
Query: 739 FVILAEQEDEHDYNSLNAVVYSSSKYYNAI 828
V++AEQE EH+ N L V +S KYY+A+
Sbjct: 507 VVVVAEQEAEHNENRLEGRVCNSLKYYSAL 536
Score = 30.0 bits (66), Expect(3) = 7e-07
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 941 DRLERHKCFGMWSKSM---EGFGCIGKLEYYRNMHSINFLHNVCLVYIVK 1081
+R+ERH+ FG W + M GF C+G E + + C Y VK
Sbjct: 573 ERVERHESFGNWRRMMVEQGGFRCMGVTERELSQSQMLLKMYSCESYSVK 622
Score = 27.7 bits (60), Expect(3) = 7e-07
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Frame = +2
Query: 401 TAVRILKQITPVPQCFC*EELDERS*FTS*IYMFR-----------------D*AWLSFF 529
TA+R+L Q+TP+P+ FTS + R W F
Sbjct: 355 TAMRLLNQVTPIPRFLH---------FTSNEMLLRAFEGKDRVHIIDFDIKQGLQWSGLF 405
Query: 530 ESLTCRNNRLSHVCNTGI 583
+SL R+N +HV TGI
Sbjct: 406 QSLASRSNPPTHVRITGI 423
>ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [Cucumis sativus]
Length = 658
Score = 38.5 bits (88), Expect(4) = 2e-06
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Frame = +1
Query: 625 PFKFNLVVNRLENVSL*MRRGM------CGCIFLIAPTSY----------------YQPK 738
PF+F+ VV+RLE+V L M CI + T Y P
Sbjct: 433 PFEFHAVVDRLEDVRLWMLHVKEQESVGVNCILQLHKTLYDGNGGALRDFLGLIRSTNPS 492
Query: 739 FVILAEQEDEHDYNSLNAVVYSSSKYYNAI 828
V++AEQE EH+ L V ++ KYY A+
Sbjct: 493 IVVMAEQEAEHNEPRLETRVAATLKYYAAV 522
Score = 28.1 bits (61), Expect(4) = 2e-06
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 837 IDISLPLEILV*FKIRDIFGREISYIIDSGGRD 935
+D SLP E K+ ++FGREI I GR+
Sbjct: 526 LDTSLPPESSARLKVEEMFGREIRNTIACEGRE 558
Score = 26.2 bits (56), Expect(4) = 2e-06
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 515 WLSFFESLTCRNNRLSHVCNTGI 583
W S F+SL R N SHV TGI
Sbjct: 387 WPSLFQSLASRANPPSHVRITGI 409
Score = 24.3 bits (51), Expect(4) = 2e-06
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 941 DRLERHKCFGMWSKSME---GFGCI 1006
+R ERH F W K ME G CI
Sbjct: 558 ERYERHVGFKKWKKDMEQQGGMQCI 582