BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010234
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medica...   428   e-118
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   428   e-117
emb|CBI37983.3| unnamed protein product [Vitis vinifera]              428   e-117
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
gb|ABK95938.1| unknown [Populus trichocarpa]                          421   e-115

>ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
           gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation
           protein [Medicago truncatula]
          Length = 320

 Score =  428 bits (1101), Expect = e-118
 Identities = 218/288 (75%), Positives = 230/288 (79%), Gaps = 2/288 (0%)
 Frame = +3

Query: 3   DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELQNAAAARVSHCGVLEFIAEEGMIYMP 182
           +KPQLE+GDKIIMPPSALDRLASLHIDYPMLFEL+NAAA RVSHCGVLEFIAEEGMIYMP
Sbjct: 26  EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVLEFIAEEGMIYMP 85

Query: 183 YWMMENLLLQEGDIVRIKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 362
           YWMMEN+LLQEGD+VR+KN TLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG
Sbjct: 86  YWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 145

Query: 363 DSIMVAYNNKKYYIDIIESKPSSAISIIETDCEVDFAPPLDYKEPERPAAPVPLGNTATQ 542
           DSIMVAYNNKKYYIDI+ESKP++AISIIETDCEVDFAPPLDYKEPERP AP   G     
Sbjct: 146 DSIMVAYNNKKYYIDIVESKPANAISIIETDCEVDFAPPLDYKEPERPVAPRSAGKAPEA 205

Query: 543 GQEAPAEAEPKFNPFTGSGRRLDGKPLKYGPETASSPGSKDKRPAHXXXXXXXXXXXXXX 722
            +EAPAE EPKFNPFTGSGRRLDGKPL Y P   SS GSKDK PA               
Sbjct: 206 DKEAPAETEPKFNPFTGSGRRLDGKPLNYQPPPVSSSGSKDKNPAAQNVNSQPSTASSSQ 265

Query: 723 XXXXXXXXKLVFGSNP--GQSTGSQKEATKATKPDQPAKEEPKFQAFT 860
                   KLVFGSNP  G+ TG   EA KA +     KEE KFQ FT
Sbjct: 266 SNAPQTQGKLVFGSNPNRGKETGKATEA-KAKQEPPKEKEEDKFQPFT 312


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
           vinifera]
          Length = 319

 Score =  428 bits (1100), Expect = e-117
 Identities = 215/287 (74%), Positives = 233/287 (81%), Gaps = 1/287 (0%)
 Frame = +3

Query: 3   DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELQNAAAARVSHCGVLEFIAEEGMIYMP 182
           DKPQ+E+G KIIMPPSALDRLASLHIDYPMLFEL N AA RVSHCGVLEFIAEEGMIYMP
Sbjct: 26  DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVLEFIAEEGMIYMP 85

Query: 183 YWMMENLLLQEGDIVRIKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 362
           YWMMEN+LLQEGD V++KN TLPKGTYVKLQPHT DFLDISNPKAILETTLRNFSCLTTG
Sbjct: 86  YWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDISNPKAILETTLRNFSCLTTG 145

Query: 363 DSIMVAYNNKKYYIDIIESKPSSAISIIETDCEVDFAPPLDYKEPERPAAPVPLGNTATQ 542
           DSIMVAYNNKKYYIDI+E+KPS+AISIIETDCEVDFAPPLD+KEPE+P APVPLG  A +
Sbjct: 146 DSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDFKEPEKPVAPVPLGKAAAE 205

Query: 543 GQEAPAEAEPKFNPFTGSGRRLDGKPLKYGPETASSPGSKDKRPAHXXXXXXXXXXXXXX 722
            QEAP E EPKFNPF G GRRLDGKP KY P   SS GSKDK+P +              
Sbjct: 206 VQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQPVN-RGSGQPSAGSSSQ 264

Query: 723 XXXXXXXXKLVFGSNPGQS-TGSQKEATKATKPDQPAKEEPKFQAFT 860
                   KLVFGSN  +S   +QKEA KATK ++P KEEPKFQ F+
Sbjct: 265 SSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEEPKFQPFS 311


>emb|CBI37983.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  428 bits (1100), Expect = e-117
 Identities = 215/287 (74%), Positives = 233/287 (81%), Gaps = 1/287 (0%)
 Frame = +3

Query: 3   DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELQNAAAARVSHCGVLEFIAEEGMIYMP 182
           DKPQ+E+G KIIMPPSALDRLASLHIDYPMLFEL N AA RVSHCGVLEFIAEEGMIYMP
Sbjct: 16  DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVLEFIAEEGMIYMP 75

Query: 183 YWMMENLLLQEGDIVRIKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 362
           YWMMEN+LLQEGD V++KN TLPKGTYVKLQPHT DFLDISNPKAILETTLRNFSCLTTG
Sbjct: 76  YWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDISNPKAILETTLRNFSCLTTG 135

Query: 363 DSIMVAYNNKKYYIDIIESKPSSAISIIETDCEVDFAPPLDYKEPERPAAPVPLGNTATQ 542
           DSIMVAYNNKKYYIDI+E+KPS+AISIIETDCEVDFAPPLD+KEPE+P APVPLG  A +
Sbjct: 136 DSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDFKEPEKPVAPVPLGKAAAE 195

Query: 543 GQEAPAEAEPKFNPFTGSGRRLDGKPLKYGPETASSPGSKDKRPAHXXXXXXXXXXXXXX 722
            QEAP E EPKFNPF G GRRLDGKP KY P   SS GSKDK+P +              
Sbjct: 196 VQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQPVN-RGSGQPSAGSSSQ 254

Query: 723 XXXXXXXXKLVFGSNPGQS-TGSQKEATKATKPDQPAKEEPKFQAFT 860
                   KLVFGSN  +S   +QKEA KATK ++P KEEPKFQ F+
Sbjct: 255 SSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEEPKFQPFS 301


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  421 bits (1083), Expect = e-115
 Identities = 216/290 (74%), Positives = 234/290 (80%), Gaps = 4/290 (1%)
 Frame = +3

Query: 3   DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELQNAAAARVSHCGVLEFIAEEGMIYMP 182
           +KPQ+E+GDKIIMPPSALDRLASLHIDYPMLFELQN AA RVSHCGVLEFIAEEGMIYMP
Sbjct: 26  EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSHCGVLEFIAEEGMIYMP 85

Query: 183 YWMMENLLLQEGDIVRIKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 362
           YWMMENLLLQEGD VR+KN TLPKG YVKLQPHTKDFLDISNPKAILETTLRN+SCLTTG
Sbjct: 86  YWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTG 145

Query: 363 DSIMVAYNNKKYYIDIIESKPSSAISIIETDCEVDFAPPLDYKEPERPAAPVPLGNTATQ 542
           DSIMVAYNNKKYYIDIIE+KPS+AISIIETDCEVDFAPPLDYKEPE+P A VP     +Q
Sbjct: 146 DSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPVASVPPSKATSQ 205

Query: 543 GQEAPAEAEPKFNPFTGSGRRLDGKPLKYGPETA-SSPGSKDKRPAHXXXXXXXXXXXXX 719
            +E PAE EPKFNPFTG+GRRLDGKPL Y P  A SS  SKDK+PA              
Sbjct: 206 AEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSS 265

Query: 720 XXXXXXXXXKLVFGSNPGQS--TGSQKEATKATKPDQP-AKEEPKFQAFT 860
                    KLVFGSN G++     ++E+ K TK +QP  KEEPKFQAFT
Sbjct: 266 QNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFT 315


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  421 bits (1083), Expect = e-115
 Identities = 216/290 (74%), Positives = 234/290 (80%), Gaps = 4/290 (1%)
 Frame = +3

Query: 3   DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELQNAAAARVSHCGVLEFIAEEGMIYMP 182
           +KPQ+E+GDKIIMPPSALDRLASLHIDYPMLFELQN AA RVSHCGVLEFIAEEGMIYMP
Sbjct: 27  EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSHCGVLEFIAEEGMIYMP 86

Query: 183 YWMMENLLLQEGDIVRIKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTG 362
           YWMMENLLLQEGD VR+KN TLPKG YVKLQPHTKDFLDISNPKAILETTLRN+SCLTTG
Sbjct: 87  YWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTG 146

Query: 363 DSIMVAYNNKKYYIDIIESKPSSAISIIETDCEVDFAPPLDYKEPERPAAPVPLGNTATQ 542
           DSIMVAYNNKKYYIDIIE+KPS+AISIIETDCEVDFAPPLDYKEPE+P A VP     +Q
Sbjct: 147 DSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPVASVPPSKATSQ 206

Query: 543 GQEAPAEAEPKFNPFTGSGRRLDGKPLKYGPETA-SSPGSKDKRPAHXXXXXXXXXXXXX 719
            +E PAE EPKFNPFTG+GRRLDGKPL Y P  A SS  SKDK+PA              
Sbjct: 207 AEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSS 266

Query: 720 XXXXXXXXXKLVFGSNPGQS--TGSQKEATKATKPDQP-AKEEPKFQAFT 860
                    KLVFGSN G++     ++E+ K TK +QP  KEEPKFQAFT
Sbjct: 267 QNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFT 316