BLASTX nr result

ID: Cnidium21_contig00010173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010173
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI48074.1| omega-6 fatty acid desaturase [Capsicum chinense]     132   4e-29
emb|CAA63432.1| D12 oleate desaturase [Solanum commersonii]           132   4e-29
gb|ABV21586.1| fatty acid desaturase [Capsicum annuum]                131   5e-29
gb|AAT72296.2| microsomal omega-6-desaturase [Nicotiana tabacum]      129   2e-28
emb|CAI48076.2| omega-6 desaturase [Capsicum chinense]                129   3e-28

>emb|CAI48074.1| omega-6 fatty acid desaturase [Capsicum chinense]
          Length = 304

 Score =  132 bits (331), Expect = 4e-29
 Identities = 57/82 (69%), Positives = 71/82 (86%)
 Frame = -1

Query: 248 PYSPIYSERERVQILLSDIGFLAGCYLVYRVALVKGFAWVMLVYGAPLHVVNGFLVMITL 69
           P SP+YSERER+QIL+SD G LA  Y++YRVAL KGF W++ +YG PL +VNGF+V+ITL
Sbjct: 212 PNSPLYSERERLQILISDAGVLAATYVLYRVALAKGFTWLVCIYGVPLLIVNGFIVLITL 271

Query: 68  LHHTHISLPHYDASEWDWLRGA 3
           LHHTH SLPHYD++EWD+LRGA
Sbjct: 272 LHHTHASLPHYDSTEWDYLRGA 293



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 516 RRHHANTNSLDRDENHIPRFKQTIRSYYHFFNNPIGRVFII 394
           RRHHANT SL+ DE +IPRFK  +R YY + +NP+GRV ++
Sbjct: 142 RRHHANTGSLENDEVYIPRFKSKLRWYYQYLDNPVGRVGVL 182


>emb|CAA63432.1| D12 oleate desaturase [Solanum commersonii]
          Length = 383

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 PYSPIYSERERVQILLSDIGFLAGCYLVYRVALVKGFAWVMLVYGAPLHVVNGFLVMITL 69
           PY PIY+ RER+QI +SD G L  CYL+YR+ALVKG AW++ VYG PL VVNGFLV+IT 
Sbjct: 212 PYGPIYNNRERLQIFISDAGVLGVCYLLYRIALVKGLAWLVCVYGVPLLVVNGFLVLITY 271

Query: 68  LHHTHISLPHYDASEWDWLRGA 3
           L HTH SLPHYD++EWDWLRGA
Sbjct: 272 LQHTHPSLPHYDSTEWDWLRGA 293


>gb|ABV21586.1| fatty acid desaturase [Capsicum annuum]
          Length = 385

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/82 (68%), Positives = 71/82 (86%)
 Frame = -1

Query: 248 PYSPIYSERERVQILLSDIGFLAGCYLVYRVALVKGFAWVMLVYGAPLHVVNGFLVMITL 69
           P SP+YSERER+QIL+SD G LA  Y++YR+AL KGF W++ +YG PL +VNGF+V+ITL
Sbjct: 212 PNSPLYSERERLQILISDAGVLAATYVLYRIALAKGFTWLVCIYGVPLLIVNGFIVLITL 271

Query: 68  LHHTHISLPHYDASEWDWLRGA 3
           LHHTH SLPHYD++EWD+LRGA
Sbjct: 272 LHHTHASLPHYDSTEWDYLRGA 293



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 516 RRHHANTNSLDRDENHIPRFKQTIRSYYHFFNNPIGRVFII 394
           RRHHANT SL+ DE +IPRFK  +R YY + +NP+GRV ++
Sbjct: 142 RRHHANTGSLENDEVYIPRFKSKLRWYYQYLDNPVGRVGVL 182


>gb|AAT72296.2| microsomal omega-6-desaturase [Nicotiana tabacum]
          Length = 383

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/82 (69%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 PYSPIYSERERVQILLSDIGFLAGCYLVYRVALVKGFAWVMLVYGAPLHVVNGFLVMITL 69
           PY PIY++RER+QI LSD G L   YL+YR+ALVKG AW++ +YG PL +VNGFLV+IT 
Sbjct: 212 PYGPIYNDRERLQIFLSDAGVLGAGYLLYRIALVKGLAWLVCMYGVPLLIVNGFLVLITY 271

Query: 68  LHHTHISLPHYDASEWDWLRGA 3
           L HTH SLPHYD+SEWDWLRGA
Sbjct: 272 LQHTHPSLPHYDSSEWDWLRGA 293


>emb|CAI48076.2| omega-6 desaturase [Capsicum chinense]
          Length = 306

 Score =  129 bits (323), Expect = 3e-28
 Identities = 50/82 (60%), Positives = 71/82 (86%)
 Frame = -1

Query: 248 PYSPIYSERERVQILLSDIGFLAGCYLVYRVALVKGFAWVMLVYGAPLHVVNGFLVMITL 69
           PYSPIY++RER+QI++SD+G +A  Y++YRVA+ +G  W++ +YG P+ +VN F+V+ITL
Sbjct: 213 PYSPIYNDRERLQIIISDVGLIAASYVLYRVAMAQGLTWLICIYGVPVVIVNSFIVLITL 272

Query: 68  LHHTHISLPHYDASEWDWLRGA 3
           LHHTH+SLPHYD+SEW W+RGA
Sbjct: 273 LHHTHLSLPHYDSSEWSWIRGA 294



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 516 RRHHANTNSLDRDENHIPRFKQTIRSYYH-FFNNPIGRVFII 394
           RRHHANTNSL+ DENH+P+ K  +R Y   + NNP+GR+FI+
Sbjct: 142 RRHHANTNSLENDENHVPKLKTKLRWYTKLYINNPVGRLFIL 183


Top