BLASTX nr result

ID: Cnidium21_contig00010087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010087
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    89   6e-16
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    88   1e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    82   1e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    78   2e-12
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    77   2e-12

>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
 Frame = -1

Query: 646 FQINLLHPLSRYQFSLPPMLTFPLAPQDLEYFDVEDSARFIHKVAMSSRLTKENTDVNFF 467
           ++I  L+P+S  Q  LPP +TF  +P DL+   +E    F++KV +SS  +  N +    
Sbjct: 110 YEICCLNPISGVQIDLPPAITFEDSPPDLDETPIEF---FLNKVVLSSTPSPSNANC--- 163

Query: 466 HHHATPSPIVMALYGDIDSLAFSRPGDKVWTPVQVQSYAILDIVYHKGKFYAVNVNGDVF 287
                   ++MA++ + + LAF +PGDK W  ++ +     D++Y+K  FYA+     V 
Sbjct: 164 --------VIMAIHSNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIG-RSKVV 214

Query: 286 VCCIDSDEEKGGPRGTKIVSIESNGEYENKYLVEPLSGSGLLLIVRYVKKKIFCKGED-I 110
            C I  D     PR      +   G ++ +YLVE  S   LL ++RY+  K     ED +
Sbjct: 215 QCDIGDD-----PRVIPFALLPKMGYFQYRYLVE--SSGCLLYVLRYMDLK---DNEDPL 264

Query: 109 VFKYRTTKFAVWRLD 65
             +Y TT F V+ LD
Sbjct: 265 KLRYETTGFKVFDLD 279


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
 Frame = -1

Query: 646 FQINLLHPLSRYQFSLPPMLTFPLAPQDLEYFDVEDSARFIHKVAMSSRLTKENTDVNFF 467
           ++I  L+P+S  Q  LPP +TF  +P DL+   +E    F++KV +SS  +  N +    
Sbjct: 110 YEICCLNPISGVQIDLPPAITFEDSPPDLDETPIEF---FLNKVVLSSTPSPSNANC--- 163

Query: 466 HHHATPSPIVMALYGDIDSLAFSRPGDKVWTPVQVQSYAILDIVYHKGKFYAVNVNGDVF 287
                   ++MA++ +   LAF +PGDK W  ++ +     D++Y+K  FYA+     V 
Sbjct: 164 --------VIMAIHSNYKKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIG-RSKVV 214

Query: 286 VCCIDSDEEKGGPRGTKIVSIESNGEYENKYLVEPLSGSGLLLIVRYVKKKIFCKGED-I 110
            C I  D     PR      +   G ++ +YLVE  S   LL ++RY+  K     ED +
Sbjct: 215 QCDIGDD-----PRVIPFALLPKMGYFQYRYLVE--SSGCLLYVLRYMDLK---DXEDPL 264

Query: 109 VFKYRTTKFAVWRLD 65
             +Y TT F V+ LD
Sbjct: 265 KLRYETTGFKVFDLD 279


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 70/218 (32%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
 Frame = -1

Query: 640 INLLHPLSRYQFSLPPMLTFPLAPQDLEYFDVEDSAR----------------------F 527
           I L++PL+R + SLPP+ +FP    ++  F+  D  R                      F
Sbjct: 109 ILLINPLTRAKLSLPPLSSFP----NVISFNYSDIGREYALRNLLGERVTVSLRQMRDSF 164

Query: 526 IHKVAMSSRLTKENTDVNFFHHHATPSPIVMALYGDIDSLAFSRPGDKVWTPVQVQSYAI 347
           I KV +SS   K+N   NF         +V+A+    D LA+ R GDK W+ V+      
Sbjct: 165 IRKVVLSSSPLKDN---NF---------VVIAILNQTDDLAYCRNGDKSWSLVENARSFC 212

Query: 346 LDIVYHKGKFYAVNVNGDVFVCCIDSDEEKGGPRGTKIVSIESNGEYENKYLVEPLSGSG 167
            D+++  G FYAVN  G + +C I SD     PR + + +    G  + +YLV   SG  
Sbjct: 213 EDVIFVNGMFYAVNKAGQIVICDISSD----SPRVSFMETPRQAGG-DMQYLVN--SGDE 265

Query: 166 LLLIVRYVKKKIFCKGEDIV--FKYRTTKFAVWRLDLN 59
           LLL+ RY+  +      D+     YRT +F V+RLD N
Sbjct: 266 LLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWN 303


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
 Frame = -1

Query: 643 QINLLHPLSRYQFSLPPMLTFPLAPQDLEYFDV-EDSARFIHKVAMSSRLTKENTDVNFF 467
           +I LL+PL+R +  LPP+ TFP   +   + DV  + A       + +R  K+  D    
Sbjct: 105 EIFLLNPLTRSKVHLPPLSTFPNVVR-FNFADVGREYALRTSSGDVYTRSLKKMRDSFIK 163

Query: 466 HHHATPSP------IVMALYGDIDSLAFSRPGDKVWTPVQ-VQSYAILDIVYHKGKFYAV 308
               + SP      I + +      LA  R  D  WT ++  QSYA  D+++H+G FYAV
Sbjct: 164 KTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAE-DVIFHRGLFYAV 222

Query: 307 NVNGDVFVCCIDSDEEKGGPRGTKIVSIESNGEYENKYLVEPLSGSGLLLIVRYVKKKIF 128
           N  G + VC    D     PR   I+ +      + +YLVE  SG  LLL+ RY+     
Sbjct: 223 NKYGSIAVC----DVSGSSPR-VSIIEMPQQFGGDLQYLVE--SGEELLLVTRYLDLTYD 275

Query: 127 CKGEDIVFKYRTTKFAVWRLDL 62
            + +     YRTT+F V RLDL
Sbjct: 276 VEPDQTSLIYRTTRFQVCRLDL 297


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
 Frame = -1

Query: 655  GRDFQINLLHPLSRYQFSLPPMLTFPLAPQDLEYFDVEDSAR--FIHKVAMSSRLTKENT 482
            G D  + LL+PL+R Q  LP +   P     ++       ++  FI+K  +SS       
Sbjct: 1018 GTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSA------ 1071

Query: 481  DVNFFHHHATPSPIVMALYGDIDSLAFSRPGDKVWTPVQVQSYAILDIVYHKGKFYAVNV 302
                    ++P   VM +Y D   LAF++PG + WT ++ +S  + DI+Y  G F AVN+
Sbjct: 1072 -------PSSPDCAVMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNL 1124

Query: 301  NGDVFVCCIDSDEEK-----GGPRGTKIVSIESNGEYENKYLVEPLSGSGLLLIVRYVKK 137
            + +V++C I   + K       P    +  I    EYE KYLVE  SG  + ++ R    
Sbjct: 1125 SWEVWICDISGSQLKTIRFAAAPALQDVDEI----EYEAKYLVE--SGGEIYMVTR---- 1174

Query: 136  KIFCKGEDIVFKYRTTKFAVWRLDL 62
             ++      +   RT  F+V +LD+
Sbjct: 1175 NLYDTARRDIPYMRTWTFSVLKLDM 1199


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