BLASTX nr result
ID: Cnidium21_contig00010051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00010051 (1146 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 387 e-106 ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 380 e-104 emb|CBI40014.3| unnamed protein product [Vitis vinifera] 380 e-104 emb|CAD20831.2| sigma factor [Spinacia oleracea] 384 e-104 ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2... 375 e-103 >ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis] gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis] Length = 569 Score = 387 bits (993), Expect(2) = e-106 Identities = 203/315 (64%), Positives = 234/315 (74%) Frame = -2 Query: 947 KEAWCLQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGE 768 K+ LQE+D SDPL YLR T S+S LLTA+EE ELS IQ LL+LE + +EL+ERYGG+ Sbjct: 245 KKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQ 304 Query: 767 PSFMQWAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXX 588 P+F QWA AAGVDQ TLR++IN+GT CKDKMIKSN+RLV+SIAK Y G GMN Sbjct: 305 PTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 364 Query: 587 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKF 408 DASKGFKFSTYAHWWIKQAVRK Sbjct: 365 CRGLVRGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKS 398 Query: 407 LSDQSRTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPK 228 LSDQSRTIRLPFHMV+ATYRVKEAR+ LY+ NGR +EE+AEA GLSM+RLSAVLL PK Sbjct: 399 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPK 458 Query: 227 APRSLDQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCR 48 APRSLDQ IG +++LKPSE+ ADPEAET+EELL+KQ M+QDLE+VLNTL PRE QVV+ R Sbjct: 459 APRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWR 518 Query: 47 FGLDDGRMKTLQEIG 3 FGL+DGRMKTLQEIG Sbjct: 519 FGLEDGRMKTLQEIG 533 Score = 26.6 bits (57), Expect(2) = e-106 Identities = 20/61 (32%), Positives = 24/61 (39%) Frame = -3 Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938 SD E T + +AVRS + VVSVK G TS+KKR Sbjct: 188 SDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKR 247 Query: 937 G 935 G Sbjct: 248 G 248 >ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera] Length = 578 Score = 380 bits (976), Expect(2) = e-104 Identities = 199/310 (64%), Positives = 230/310 (74%) Frame = -2 Query: 932 LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753 LQE+D SDPL YLR T S+S LLTA EE ELS+GIQ LL+LE + ++L ER+G +P+F Q Sbjct: 259 LQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQ 318 Query: 752 WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573 WA AAGVDQ TLRR+ NYG CKDKMIKSN+RLV+SIAK Y G GMN Sbjct: 319 WAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLV 378 Query: 572 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393 DASKGFKFSTYAHWWIKQAVRK LSDQS Sbjct: 379 RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDQS 412 Query: 392 RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213 RTIRLPFHMV+ATYRVKEAR+ LY+ NGR +NEE+AEATGLSM+RL+AVLL PKAPRSL Sbjct: 413 RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 472 Query: 212 DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33 DQ IG + NLKPSE+ ADP+AET+EELLIKQ MR+DLE+VLN+L PREKQV++ R+GL+D Sbjct: 473 DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 532 Query: 32 GRMKTLQEIG 3 GR KTLQEIG Sbjct: 533 GRTKTLQEIG 542 Score = 27.7 bits (60), Expect(2) = e-104 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -3 Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938 SD EPT KS+ VRS A VVSV+SG TS++KR Sbjct: 197 SDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKR 256 >emb|CBI40014.3| unnamed protein product [Vitis vinifera] Length = 575 Score = 380 bits (976), Expect(2) = e-104 Identities = 199/310 (64%), Positives = 230/310 (74%) Frame = -2 Query: 932 LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753 LQE+D SDPL YLR T S+S LLTA EE ELS+GIQ LL+LE + ++L ER+G +P+F Q Sbjct: 256 LQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQ 315 Query: 752 WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573 WA AAGVDQ TLRR+ NYG CKDKMIKSN+RLV+SIAK Y G GMN Sbjct: 316 WAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLV 375 Query: 572 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393 DASKGFKFSTYAHWWIKQAVRK LSDQS Sbjct: 376 RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDQS 409 Query: 392 RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213 RTIRLPFHMV+ATYRVKEAR+ LY+ NGR +NEE+AEATGLSM+RL+AVLL PKAPRSL Sbjct: 410 RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 469 Query: 212 DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33 DQ IG + NLKPSE+ ADP+AET+EELLIKQ MR+DLE+VLN+L PREKQV++ R+GL+D Sbjct: 470 DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 529 Query: 32 GRMKTLQEIG 3 GR KTLQEIG Sbjct: 530 GRTKTLQEIG 539 Score = 27.7 bits (60), Expect(2) = e-104 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -3 Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938 SD EPT KS+ VRS A VVSV+SG TS++KR Sbjct: 194 SDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKR 253 >emb|CAD20831.2| sigma factor [Spinacia oleracea] Length = 575 Score = 384 bits (987), Expect = e-104 Identities = 201/322 (62%), Positives = 239/322 (74%) Frame = -2 Query: 968 KIWSH*PKEAWCLQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKEL 789 K+ S+ K+ +QE+D SDPL YLR +SS LLT++EE ELS GIQ LL+LE ++ EL Sbjct: 244 KVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDEL 303 Query: 788 SERYGGEPSFMQWAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNF 609 R+G PSF+QWA AAG+DQ TLRR++N+GTFCKDKMIKSNVRLV+SIAK Y G+GMN Sbjct: 304 KVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNL 363 Query: 608 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWI 429 DASKGFKFSTYAHWWI Sbjct: 364 QDLVQEGCRGLVRGAEKF--------------------------DASKGFKFSTYAHWWI 397 Query: 428 KQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLS 249 KQAVRK LSDQSRTIRLPFHMV+ATYRVKEAR+ L + NG+Q +NEE+AEATGLSM+RL+ Sbjct: 398 KQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLT 457 Query: 248 AVLLVPKAPRSLDQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPRE 69 AVL+ PKAPRSLDQ IGF++NLKPSE+ ADPEAET+E+LL KQ MRQDLE+VL+TL RE Sbjct: 458 AVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSRE 517 Query: 68 KQVVKCRFGLDDGRMKTLQEIG 3 KQV++ RFGL+DGRMKTLQEIG Sbjct: 518 KQVIRWRFGLEDGRMKTLQEIG 539 >ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1| predicted protein [Populus trichocarpa] Length = 567 Score = 375 bits (962), Expect(2) = e-103 Identities = 195/310 (62%), Positives = 230/310 (74%) Frame = -2 Query: 932 LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753 LQE+D+SDPL + R SSS LL+A EE ELS+GIQ LL+LE I +EL ER+GGEPSF Q Sbjct: 248 LQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQ 307 Query: 752 WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573 WA AAGVDQ TLR+++NYG CKDKMIKSNVRLV+SIAK Y GTGMN Sbjct: 308 WAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLV 367 Query: 572 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393 DASKGFKFSTYAHWWIKQAVRK LSD+S Sbjct: 368 RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDRS 401 Query: 392 RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213 RTIRLPFHMVDATYRVKEAR+ LY+ NGR ++E+AEA GLSM+RLSAVLL PKAPRSL Sbjct: 402 RTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSL 461 Query: 212 DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33 DQ +GF+++LK SE+TADPEAET+E+LL+K+ M++DL +VL +L PRE QVV+ RFG++D Sbjct: 462 DQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMED 521 Query: 32 GRMKTLQEIG 3 GRMKTLQEIG Sbjct: 522 GRMKTLQEIG 531 Score = 28.1 bits (61), Expect(2) = e-103 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -3 Query: 1114 DVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938 D EPT + +AVRS A VVSVKSG TS+KKR Sbjct: 187 DCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKR 245