BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010051
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   387   e-106
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   380   e-104
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              380   e-104
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      384   e-104
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...   375   e-103

>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  387 bits (993), Expect(2) = e-106
 Identities = 203/315 (64%), Positives = 234/315 (74%)
 Frame = -2

Query: 947  KEAWCLQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGE 768
            K+   LQE+D SDPL YLR T S+S LLTA+EE ELS  IQ LL+LE + +EL+ERYGG+
Sbjct: 245  KKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQ 304

Query: 767  PSFMQWAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXX 588
            P+F QWA AAGVDQ TLR++IN+GT CKDKMIKSN+RLV+SIAK Y G GMN        
Sbjct: 305  PTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 364

Query: 587  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKF 408
                                                 DASKGFKFSTYAHWWIKQAVRK 
Sbjct: 365  CRGLVRGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKS 398

Query: 407  LSDQSRTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPK 228
            LSDQSRTIRLPFHMV+ATYRVKEAR+ LY+ NGR   +EE+AEA GLSM+RLSAVLL PK
Sbjct: 399  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPK 458

Query: 227  APRSLDQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCR 48
            APRSLDQ IG +++LKPSE+ ADPEAET+EELL+KQ M+QDLE+VLNTL PRE QVV+ R
Sbjct: 459  APRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWR 518

Query: 47   FGLDDGRMKTLQEIG 3
            FGL+DGRMKTLQEIG
Sbjct: 519  FGLEDGRMKTLQEIG 533



 Score = 26.6 bits (57), Expect(2) = e-106
 Identities = 20/61 (32%), Positives = 24/61 (39%)
 Frame = -3

Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938
            SD  E T            + +AVRS                  + VVSVK G TS+KKR
Sbjct: 188  SDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKR 247

Query: 937  G 935
            G
Sbjct: 248  G 248


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  380 bits (976), Expect(2) = e-104
 Identities = 199/310 (64%), Positives = 230/310 (74%)
 Frame = -2

Query: 932  LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753
            LQE+D SDPL YLR T S+S LLTA EE ELS+GIQ LL+LE + ++L ER+G +P+F Q
Sbjct: 259  LQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQ 318

Query: 752  WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573
            WA AAGVDQ TLRR+ NYG  CKDKMIKSN+RLV+SIAK Y G GMN             
Sbjct: 319  WAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLV 378

Query: 572  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393
                                            DASKGFKFSTYAHWWIKQAVRK LSDQS
Sbjct: 379  RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDQS 412

Query: 392  RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213
            RTIRLPFHMV+ATYRVKEAR+ LY+ NGR  +NEE+AEATGLSM+RL+AVLL PKAPRSL
Sbjct: 413  RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 472

Query: 212  DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33
            DQ IG + NLKPSE+ ADP+AET+EELLIKQ MR+DLE+VLN+L PREKQV++ R+GL+D
Sbjct: 473  DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 532

Query: 32   GRMKTLQEIG 3
            GR KTLQEIG
Sbjct: 533  GRTKTLQEIG 542



 Score = 27.7 bits (60), Expect(2) = e-104
 Identities = 21/60 (35%), Positives = 25/60 (41%)
 Frame = -3

Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938
            SD  EPT            KS+ VRS                  A VVSV+SG TS++KR
Sbjct: 197  SDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKR 256


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  380 bits (976), Expect(2) = e-104
 Identities = 199/310 (64%), Positives = 230/310 (74%)
 Frame = -2

Query: 932  LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753
            LQE+D SDPL YLR T S+S LLTA EE ELS+GIQ LL+LE + ++L ER+G +P+F Q
Sbjct: 256  LQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQ 315

Query: 752  WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573
            WA AAGVDQ TLRR+ NYG  CKDKMIKSN+RLV+SIAK Y G GMN             
Sbjct: 316  WAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLV 375

Query: 572  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393
                                            DASKGFKFSTYAHWWIKQAVRK LSDQS
Sbjct: 376  RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDQS 409

Query: 392  RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213
            RTIRLPFHMV+ATYRVKEAR+ LY+ NGR  +NEE+AEATGLSM+RL+AVLL PKAPRSL
Sbjct: 410  RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 469

Query: 212  DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33
            DQ IG + NLKPSE+ ADP+AET+EELLIKQ MR+DLE+VLN+L PREKQV++ R+GL+D
Sbjct: 470  DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 529

Query: 32   GRMKTLQEIG 3
            GR KTLQEIG
Sbjct: 530  GRTKTLQEIG 539



 Score = 27.7 bits (60), Expect(2) = e-104
 Identities = 21/60 (35%), Positives = 25/60 (41%)
 Frame = -3

Query: 1117 SDVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938
            SD  EPT            KS+ VRS                  A VVSV+SG TS++KR
Sbjct: 194  SDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKR 253


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  384 bits (987), Expect = e-104
 Identities = 201/322 (62%), Positives = 239/322 (74%)
 Frame = -2

Query: 968  KIWSH*PKEAWCLQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKEL 789
            K+ S+  K+   +QE+D SDPL YLR   +SS LLT++EE ELS GIQ LL+LE ++ EL
Sbjct: 244  KVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDEL 303

Query: 788  SERYGGEPSFMQWAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNF 609
              R+G  PSF+QWA AAG+DQ TLRR++N+GTFCKDKMIKSNVRLV+SIAK Y G+GMN 
Sbjct: 304  KVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNL 363

Query: 608  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWI 429
                                                        DASKGFKFSTYAHWWI
Sbjct: 364  QDLVQEGCRGLVRGAEKF--------------------------DASKGFKFSTYAHWWI 397

Query: 428  KQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLS 249
            KQAVRK LSDQSRTIRLPFHMV+ATYRVKEAR+ L + NG+Q +NEE+AEATGLSM+RL+
Sbjct: 398  KQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLT 457

Query: 248  AVLLVPKAPRSLDQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPRE 69
            AVL+ PKAPRSLDQ IGF++NLKPSE+ ADPEAET+E+LL KQ MRQDLE+VL+TL  RE
Sbjct: 458  AVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSRE 517

Query: 68   KQVVKCRFGLDDGRMKTLQEIG 3
            KQV++ RFGL+DGRMKTLQEIG
Sbjct: 518  KQVIRWRFGLEDGRMKTLQEIG 539


>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  375 bits (962), Expect(2) = e-103
 Identities = 195/310 (62%), Positives = 230/310 (74%)
 Frame = -2

Query: 932  LQEIDRSDPLWYLRQTDSSSGLLTAAEEQELSQGIQVLLRLENIYKELSERYGGEPSFMQ 753
            LQE+D+SDPL + R   SSS LL+A EE ELS+GIQ LL+LE I +EL ER+GGEPSF Q
Sbjct: 248  LQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQ 307

Query: 752  WAVAAGVDQTTLRRQINYGTFCKDKMIKSNVRLVVSIAKKYLGTGMNFXXXXXXXXXXXX 573
            WA AAGVDQ TLR+++NYG  CKDKMIKSNVRLV+SIAK Y GTGMN             
Sbjct: 308  WAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLV 367

Query: 572  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASKGFKFSTYAHWWIKQAVRKFLSDQS 393
                                            DASKGFKFSTYAHWWIKQAVRK LSD+S
Sbjct: 368  RGAEKF--------------------------DASKGFKFSTYAHWWIKQAVRKSLSDRS 401

Query: 392  RTIRLPFHMVDATYRVKEARRNLYNANGRQASNEEIAEATGLSMRRLSAVLLVPKAPRSL 213
            RTIRLPFHMVDATYRVKEAR+ LY+ NGR   ++E+AEA GLSM+RLSAVLL PKAPRSL
Sbjct: 402  RTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSL 461

Query: 212  DQNIGFSLNLKPSEITADPEAETSEELLIKQSMRQDLERVLNTLKPREKQVVKCRFGLDD 33
            DQ +GF+++LK SE+TADPEAET+E+LL+K+ M++DL +VL +L PRE QVV+ RFG++D
Sbjct: 462  DQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMED 521

Query: 32   GRMKTLQEIG 3
            GRMKTLQEIG
Sbjct: 522  GRMKTLQEIG 531



 Score = 28.1 bits (61), Expect(2) = e-103
 Identities = 21/59 (35%), Positives = 24/59 (40%)
 Frame = -3

Query: 1114 DVEEPTXXXXXXXXXXXLKSVAVRSXXXXXXXXXXXXXXXXXXAIVVSVKSGPTSQKKR 938
            D  EPT            + +AVRS                  A VVSVKSG TS+KKR
Sbjct: 187  DCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKR 245