BLASTX nr result

ID: Cnidium21_contig00010041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010041
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256...    98   4e-18
emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]    98   4e-18
ref|XP_002888573.1| hypothetical protein ARALYDRAFT_475800 [Arab...    88   4e-15
ref|NP_564888.1| uncharacterized protein [Arabidopsis thaliana] ...    87   1e-14
gb|ABY59212.1| At1g67050-like protein [Arabidopsis lyrata subsp....    78   5e-12

>ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256597 [Vitis vinifera]
          Length = 250

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 87/268 (32%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
 Frame = -2

Query: 1153 MAMDLYKDNPSPLGIMSPRISFSHDLSPSDIINFPVELRSISSSSP--EFDFCNHHSFNQ 980
            MA++L  D+ S    MSPRISFSHDL  +D++  PVE     S+SP  +FDFC + SF Q
Sbjct: 1    MAIELCSDSCSMC--MSPRISFSHDLCQADVV--PVEHDPSQSNSPTNDFDFCVYESFYQ 56

Query: 979  HSVSAEDIFLDGKLLPTDXXXXXXXXXXXXXXXXPSFNDSHPTVLKPEKKNSESQRSNDT 800
             + SA+++F DGK+LP                  P    + P +  P + N + + S + 
Sbjct: 57   DTSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPL--PTQNNRKKESSREI 114

Query: 799  PGCCDHQSEDXXXXXXXXXXXXXXXSLNSGNSYARSLCPIPLL-XXXXXXXXXXXXXXXX 623
                +   E                SLN  + YARSLCP+PLL                 
Sbjct: 115  KRTINEVYE--KQNSKSFWRFKRSTSLNCSSGYARSLCPLPLLSRSNSTGSVSNAKRSAL 172

Query: 622  XXXXSHNLNXXXXXXXXXXXXXXXXXXXXXXXKPPLKKXXXXXXXXXXXXXXXXXGVRIN 443
                 +N+                        KPPLKK                 GVRIN
Sbjct: 173  SSKDGNNIKNWHKHPSVAPIKSPHSSSSTSYQKPPLKK----------TYGSHSNGVRIN 222

Query: 442  PVLNVPSANLFGLGSIFSTSSNKQEKNK 359
            PVLNVP+ +LFGLGSIFS   +K  K K
Sbjct: 223  PVLNVPTPSLFGLGSIFSNGKDKINKRK 250


>emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]
          Length = 250

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 87/268 (32%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
 Frame = -2

Query: 1153 MAMDLYKDNPSPLGIMSPRISFSHDLSPSDIINFPVELRSISSSSP--EFDFCNHHSFNQ 980
            MA++L  D+ S    MSPRISFSHDL  +D++  PVE     S+SP  +FDFC + SF Q
Sbjct: 1    MAIELCSDSCSMC--MSPRISFSHDLCQADVV--PVEHXPSQSNSPTNDFDFCVYESFYQ 56

Query: 979  HSVSAEDIFLDGKLLPTDXXXXXXXXXXXXXXXXPSFNDSHPTVLKPEKKNSESQRSNDT 800
             + SA+++F DGK+LP                  P    + P +  P + N + + S + 
Sbjct: 57   DTSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPL--PTQNNRKKESSREI 114

Query: 799  PGCCDHQSEDXXXXXXXXXXXXXXXSLNSGNSYARSLCPIPLL-XXXXXXXXXXXXXXXX 623
                +   E                SLN  + YARSLCP+PLL                 
Sbjct: 115  KRTINEVYE--KQNSKSFWRFKRSTSLNCSSGYARSLCPLPLLSRSNSTGSVSNAKRSAL 172

Query: 622  XXXXSHNLNXXXXXXXXXXXXXXXXXXXXXXXKPPLKKXXXXXXXXXXXXXXXXXGVRIN 443
                 +N+                        KPPLKK                 GVRIN
Sbjct: 173  SSKDGNNIKNWHKHPSVAPIKSPHSSSSTSYQKPPLKK----------TYGSHSNGVRIN 222

Query: 442  PVLNVPSANLFGLGSIFSTSSNKQEKNK 359
            PVLNVP+ +LFGLGSIFS   +K  K K
Sbjct: 223  PVLNVPTPSLFGLGSIFSNGKDKINKXK 250


>ref|XP_002888573.1| hypothetical protein ARALYDRAFT_475800 [Arabidopsis lyrata subsp.
            lyrata] gi|297334414|gb|EFH64832.1| hypothetical protein
            ARALYDRAFT_475800 [Arabidopsis lyrata subsp. lyrata]
          Length = 266

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 86/287 (29%), Positives = 122/287 (42%), Gaps = 21/287 (7%)
 Frame = -2

Query: 1153 MAMDLYKDNPSPLGIMSPRISFSHDLSPSDIINFPVELRSISSS---------SPEFDFC 1001
            MA+DL  +N +    MSPRISFS D   SD I  P+E R + SS         S +FDFC
Sbjct: 1    MAVDLLSENSN----MSPRISFSRDFCQSDAI--PIEKRPLRSSNSKPSSLNSSIDFDFC 54

Query: 1000 ------NHHSFNQHSVSAEDIFLDGKLLPTDXXXXXXXXXXXXXXXXPSFNDSHPTVLKP 839
                  +  SF+Q S SA+++F +GK+LPT+                    D+ P   KP
Sbjct: 55   IPGGVNSGESFDQGSWSADELFSNGKILPTEIKKKPEPGKKEPES-----KDTKPVKTKP 109

Query: 838  E----KKNSESQRSNDTPGCCDHQSEDXXXXXXXXXXXXXXXSLNSGNSYARSLCPIPLL 671
            +    +K +E Q+ +D     + ++                  LN G++Y RSLCP+PLL
Sbjct: 110  DSRKQRKQNEEQQEDDVIITTEEKTNTKSFWGFKRSSS-----LNCGSTYGRSLCPLPLL 164

Query: 670  XXXXXXXXXXXXXXXXXXXXSH-NLNXXXXXXXXXXXXXXXXXXXXXXXKPPLKKXXXXX 494
                                 + ++                        KPPLKK     
Sbjct: 165  NRSNSTGSTSSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKK----S 220

Query: 493  XXXXXXXXXXXXGVRINPVLN-VPSANLFGLGSIFSTSSNKQEKNKK 356
                        G+R++PV+N VPS NLFG GS+F  S N ++KNKK
Sbjct: 221  YGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMF--SGNGRDKNKK 265


>ref|NP_564888.1| uncharacterized protein [Arabidopsis thaliana]
            gi|9755454|gb|AAF98215.1|AC007152_11 Unknown protein
            [Arabidopsis thaliana] gi|20260172|gb|AAM12984.1| unknown
            protein [Arabidopsis thaliana] gi|21537236|gb|AAM61577.1|
            unknown [Arabidopsis thaliana] gi|22136262|gb|AAM91209.1|
            unknown protein [Arabidopsis thaliana]
            gi|332196469|gb|AEE34590.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 264

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 85/283 (30%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
 Frame = -2

Query: 1153 MAMDLYKDNPSPLGIMSPRISFSHDLSPSDIINFPVELRSISSS---------SPEFDFC 1001
            MA+DL  +N +    MSPRISFS D   SD I  P+E R + SS         S +FDFC
Sbjct: 1    MAVDLLSENSN----MSPRISFSRDFCQSDAI--PIEKRPLRSSNSKPSSLNSSIDFDFC 54

Query: 1000 ------NHHSFNQHSVSAEDIFLDGKLLPTDXXXXXXXXXXXXXXXXPSFNDSHPTVLKP 839
                  +  SF+Q S SA+++F +GK+LPT+                     S P   K 
Sbjct: 55   IPGGVNSGESFDQGSWSADELFSNGKILPTEIKKKPEPGKKEPEPKPVK---SKPDSRKQ 111

Query: 838  EKKNSESQRSNDTPGCCDHQSEDXXXXXXXXXXXXXXXSLNSGNSYARSLCPIPLLXXXX 659
             K+ +E Q+ +D     + ++                  LN G++Y RSLCP+PLL    
Sbjct: 112  RKQPNEEQQEDDVIITTEEKTNTKSFWGFKRSSS-----LNCGSTYGRSLCPLPLLNRSN 166

Query: 658  XXXXXXXXXXXXXXXXSH-NLNXXXXXXXXXXXXXXXXXXXXXXXKPPLKKXXXXXXXXX 482
                             + ++                        KPPLKK         
Sbjct: 167  STGSTSSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKK----SYGGY 222

Query: 481  XXXXXXXXGVRINPVLN-VPSANLFGLGSIFSTSSNKQEKNKK 356
                    G+R++PV+N VPS NLFG GS+F  S N ++KNKK
Sbjct: 223  SYGSHGGGGIRVSPVINVVPSGNLFGFGSMF--SGNGRDKNKK 263


>gb|ABY59212.1| At1g67050-like protein [Arabidopsis lyrata subsp. petraea]
          Length = 254

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 76/261 (29%), Positives = 107/261 (40%), Gaps = 21/261 (8%)
 Frame = -2

Query: 1108 MSPRISFSHDLSPSDIINFPVELRSISSS---------SPEFDFC------NHHSFNQHS 974
            MSPRISFS D   SD I  P+E R + SS         S +FDFC      +  SF+Q S
Sbjct: 7    MSPRISFSRDFCQSDAI--PIEKRPLRSSNSKPSSLNSSIDFDFCIPGGVNSGESFDQGS 64

Query: 973  VSAEDIFLDGKLLPTDXXXXXXXXXXXXXXXXPSFNDSHPTVLKPE----KKNSESQRSN 806
             SA+++F +GK+LPT+                    D+ P   KP+    +K +E Q+ +
Sbjct: 65   WSADELFSNGKILPTEIKKKPEPGKKEPES-----KDTKPVKTKPDSRKQRKQNEEQQED 119

Query: 805  DTPGCCDHQSEDXXXXXXXXXXXXXXXSLNSGNSYARSLCPIPLLXXXXXXXXXXXXXXX 626
            D     + ++                  LN G++Y RSLCP+PLL               
Sbjct: 120  DVIITTEEKTNTKSFWGFKRSSS-----LNCGSTYGRSLCPLPLLNRSNSTGSTSSKQKQ 174

Query: 625  XXXXXSH-NLNXXXXXXXXXXXXXXXXXXXXXXXKPPLKKXXXXXXXXXXXXXXXXXGVR 449
                  + ++                        KPPLKK                 G+R
Sbjct: 175  SSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKK----SYGGYSYGSHGGGGIR 230

Query: 448  INPVLN-VPSANLFGLGSIFS 389
            ++PV+N VPS NLFG GS+FS
Sbjct: 231  VSPVINVVPSGNLFGFGSMFS 251


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