BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010034
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   157   8e-37
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   155   2e-36
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   154   7e-36
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   154   7e-36

>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 273 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGATANLQERLFLCSDYSQMRICRT 94
           RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA ANL ERLF  SD SQM +CR 
Sbjct: 700 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCRK 759

Query: 93  CKHTANVIQRTMMGKHKIRGPYCRYCESAED 1
           C++ ANVIQR++ G  KIRGPYCR+C+S ED
Sbjct: 760 CQNMANVIQRSVFGGRKIRGPYCRFCDSVED 790


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/91 (79%), Positives = 77/91 (84%)
 Frame = -3

Query: 273  RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGATANLQERLFLCSDYSQMRICRT 94
            RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA ANL ERLF  SD SQM ICR 
Sbjct: 898  RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRK 957

Query: 93   CKHTANVIQRTMMGKHKIRGPYCRYCESAED 1
            C + ANVIQR + G  KIRGPYCR+CES E+
Sbjct: 958  CNNIANVIQRAVPGGRKIRGPYCRFCESVEE 988


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = -3

Query: 273  RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGATANLQERLFLCSDYSQMRICRT 94
            RNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCLIAHGA ANL ERLF  SD + M ICR 
Sbjct: 1099 RNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRR 1158

Query: 93   CKHTANVIQRTMMGKHKIRGPYCRYCESAED 1
            CK+ +NVIQR++ G  K+RGPYCRYCES+E+
Sbjct: 1159 CKNISNVIQRSVAGGRKVRGPYCRYCESSEE 1189


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = -3

Query: 273  RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGATANLQERLFLCSDYSQMRICRT 94
            RNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCLIAHGA ANL ERLF  SD + M ICR 
Sbjct: 1077 RNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRR 1136

Query: 93   CKHTANVIQRTMMGKHKIRGPYCRYCESAED 1
            CK+ +NVIQR++ G  K+RGPYCRYCES+E+
Sbjct: 1137 CKNISNVIQRSVAGGRKVRGPYCRYCESSEE 1167


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 273  RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGATANLQERLFLCSDYSQMRICRT 94
            RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA+ANL ERLF  SD SQM IC+ 
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQK 1141

Query: 93   CKHTANVIQRTMMGKHKIRGPYCRYCESAED 1
            CK+ ANVIQR + G  KIRGPYCR CES ++
Sbjct: 1142 CKNVANVIQRAVPGGRKIRGPYCRVCESVDE 1172