BLASTX nr result

ID: Cnidium21_contig00010032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010032
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas...    75   1e-16
gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis th...    64   3e-13
dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis tha...    64   3e-13
ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis tha...    64   3e-13
ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g...    65   3e-13

>ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
           vinifera]
          Length = 888

 Score = 74.7 bits (182), Expect(3) = 1e-16
 Identities = 41/84 (48%), Positives = 50/84 (59%)
 Frame = -3

Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
           EL IDSVCV A+SPPVK   +P PYLGFL +I   MF+ VKPKP+S +AM          
Sbjct: 189 ELKIDSVCVNAYSPPVKGPELPVPYLGFLSRIPAYMFSFVKPKPVSKRAMEIKREREELK 248

Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
                       E+EMMEKAI++Q
Sbjct: 249 RNRKKELVGMREEREMMEKAIRVQ 272



 Score = 28.9 bits (63), Expect(3) = 1e-16
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -2

Query: 371 AEVVLAVLDDSRVLRIVIRS 312
           AE VL VL+DSRVLR V+ S
Sbjct: 157 AEAVLVVLEDSRVLRTVVPS 176



 Score = 27.3 bits (59), Expect(3) = 1e-16
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -1

Query: 414 KKEGKLKHIIKP 379
           K+EGKLKH+IKP
Sbjct: 134 KREGKLKHVIKP 145


>gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis thaliana]
          Length = 983

 Score = 64.3 bits (155), Expect(3) = 3e-13
 Identities = 36/84 (42%), Positives = 45/84 (53%)
 Frame = -3

Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
           ELGID  CV A++PPVK+  +PSPYLGFL K+   M T VKPK  S +A           
Sbjct: 339 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 398

Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
                     + E+ MMEK +K Q
Sbjct: 399 RQRKEEIETMKEERVMMEKTMKAQ 422



 Score = 29.3 bits (64), Expect(3) = 3e-13
 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -2

Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
           LSLR  AE VL VL+DSRVLR V+ S
Sbjct: 301 LSLRQKAEPVLVVLEDSRVLRTVLPS 326



 Score = 26.2 bits (56), Expect(3) = 3e-13
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 414 KKEGKLKHIIKP 379
           K EGKLKH+IKP
Sbjct: 287 KAEGKLKHVIKP 298


>dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis thaliana]
          Length = 976

 Score = 64.3 bits (155), Expect(3) = 3e-13
 Identities = 36/84 (42%), Positives = 45/84 (53%)
 Frame = -3

Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
           ELGID  CV A++PPVK+  +PSPYLGFL K+   M T VKPK  S +A           
Sbjct: 277 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 336

Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
                     + E+ MMEK +K Q
Sbjct: 337 RQRKEEIETMKEERVMMEKTMKAQ 360



 Score = 29.3 bits (64), Expect(3) = 3e-13
 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -2

Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
           LSLR  AE VL VL+DSRVLR V+ S
Sbjct: 239 LSLRQKAEPVLVVLEDSRVLRTVLPS 264



 Score = 26.2 bits (56), Expect(3) = 3e-13
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 414 KKEGKLKHIIKP 379
           K EGKLKH+IKP
Sbjct: 225 KAEGKLKHVIKP 236


>ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis thaliana]
           gi|332642273|gb|AEE75794.1| AAA-type ATPase family
           protein [Arabidopsis thaliana]
          Length = 876

 Score = 64.3 bits (155), Expect(3) = 3e-13
 Identities = 36/84 (42%), Positives = 45/84 (53%)
 Frame = -3

Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
           ELGID  CV A++PPVK+  +PSPYLGFL K+   M T VKPK  S +A           
Sbjct: 177 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 236

Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
                     + E+ MMEK +K Q
Sbjct: 237 RQRKEEIETMKEERVMMEKTMKAQ 260



 Score = 29.3 bits (64), Expect(3) = 3e-13
 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -2

Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
           LSLR  AE VL VL+DSRVLR V+ S
Sbjct: 139 LSLRQKAEPVLVVLEDSRVLRTVLPS 164



 Score = 26.2 bits (56), Expect(3) = 3e-13
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 414 KKEGKLKHIIKP 379
           K EGKLKH+IKP
Sbjct: 125 KAEGKLKHVIKP 136


>ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata]
           gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 874

 Score = 65.5 bits (158), Expect(3) = 3e-13
 Identities = 37/84 (44%), Positives = 46/84 (54%)
 Frame = -3

Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
           ELGID  CV A++PPVK+  +PSPYLGFL K+   M T VKPK  S +A           
Sbjct: 175 ELGIDGQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKKMREDFK 234

Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
                   R + E+ MMEK +K Q
Sbjct: 235 RQRKEEIERMKEERAMMEKTMKAQ 258



 Score = 29.3 bits (64), Expect(3) = 3e-13
 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -2

Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
           LSLR  AE VL VL+DSRVLR V+ S
Sbjct: 137 LSLRQKAEPVLVVLEDSRVLRTVLPS 162



 Score = 25.0 bits (53), Expect(3) = 3e-13
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 414 KKEGKLKHIIKP 379
           K +GKLKH+IKP
Sbjct: 123 KAQGKLKHVIKP 134


Top