BLASTX nr result
ID: Cnidium21_contig00010032
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00010032 (570 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas... 75 1e-16 gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis th... 64 3e-13 dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis tha... 64 3e-13 ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis tha... 64 3e-13 ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g... 65 3e-13 >ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis vinifera] Length = 888 Score = 74.7 bits (182), Expect(3) = 1e-16 Identities = 41/84 (48%), Positives = 50/84 (59%) Frame = -3 Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128 EL IDSVCV A+SPPVK +P PYLGFL +I MF+ VKPKP+S +AM Sbjct: 189 ELKIDSVCVNAYSPPVKGPELPVPYLGFLSRIPAYMFSFVKPKPVSKRAMEIKREREELK 248 Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56 E+EMMEKAI++Q Sbjct: 249 RNRKKELVGMREEREMMEKAIRVQ 272 Score = 28.9 bits (63), Expect(3) = 1e-16 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -2 Query: 371 AEVVLAVLDDSRVLRIVIRS 312 AE VL VL+DSRVLR V+ S Sbjct: 157 AEAVLVVLEDSRVLRTVVPS 176 Score = 27.3 bits (59), Expect(3) = 1e-16 Identities = 10/12 (83%), Positives = 12/12 (100%) Frame = -1 Query: 414 KKEGKLKHIIKP 379 K+EGKLKH+IKP Sbjct: 134 KREGKLKHVIKP 145 >gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis thaliana] Length = 983 Score = 64.3 bits (155), Expect(3) = 3e-13 Identities = 36/84 (42%), Positives = 45/84 (53%) Frame = -3 Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128 ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A Sbjct: 339 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 398 Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56 + E+ MMEK +K Q Sbjct: 399 RQRKEEIETMKEERVMMEKTMKAQ 422 Score = 29.3 bits (64), Expect(3) = 3e-13 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -2 Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312 LSLR AE VL VL+DSRVLR V+ S Sbjct: 301 LSLRQKAEPVLVVLEDSRVLRTVLPS 326 Score = 26.2 bits (56), Expect(3) = 3e-13 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 Query: 414 KKEGKLKHIIKP 379 K EGKLKH+IKP Sbjct: 287 KAEGKLKHVIKP 298 >dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis thaliana] Length = 976 Score = 64.3 bits (155), Expect(3) = 3e-13 Identities = 36/84 (42%), Positives = 45/84 (53%) Frame = -3 Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128 ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A Sbjct: 277 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 336 Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56 + E+ MMEK +K Q Sbjct: 337 RQRKEEIETMKEERVMMEKTMKAQ 360 Score = 29.3 bits (64), Expect(3) = 3e-13 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -2 Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312 LSLR AE VL VL+DSRVLR V+ S Sbjct: 239 LSLRQKAEPVLVVLEDSRVLRTVLPS 264 Score = 26.2 bits (56), Expect(3) = 3e-13 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 Query: 414 KKEGKLKHIIKP 379 K EGKLKH+IKP Sbjct: 225 KAEGKLKHVIKP 236 >ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis thaliana] gi|332642273|gb|AEE75794.1| AAA-type ATPase family protein [Arabidopsis thaliana] Length = 876 Score = 64.3 bits (155), Expect(3) = 3e-13 Identities = 36/84 (42%), Positives = 45/84 (53%) Frame = -3 Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128 ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A Sbjct: 177 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 236 Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56 + E+ MMEK +K Q Sbjct: 237 RQRKEEIETMKEERVMMEKTMKAQ 260 Score = 29.3 bits (64), Expect(3) = 3e-13 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -2 Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312 LSLR AE VL VL+DSRVLR V+ S Sbjct: 139 LSLRQKAEPVLVVLEDSRVLRTVLPS 164 Score = 26.2 bits (56), Expect(3) = 3e-13 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 Query: 414 KKEGKLKHIIKP 379 K EGKLKH+IKP Sbjct: 125 KAEGKLKHVIKP 136 >ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] Length = 874 Score = 65.5 bits (158), Expect(3) = 3e-13 Identities = 37/84 (44%), Positives = 46/84 (54%) Frame = -3 Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128 ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A Sbjct: 175 ELGIDGQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKKMREDFK 234 Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56 R + E+ MMEK +K Q Sbjct: 235 RQRKEEIERMKEERAMMEKTMKAQ 258 Score = 29.3 bits (64), Expect(3) = 3e-13 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -2 Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312 LSLR AE VL VL+DSRVLR V+ S Sbjct: 137 LSLRQKAEPVLVVLEDSRVLRTVLPS 162 Score = 25.0 bits (53), Expect(3) = 3e-13 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 Query: 414 KKEGKLKHIIKP 379 K +GKLKH+IKP Sbjct: 123 KAQGKLKHVIKP 134