BLASTX nr result
ID: Cnidium21_contig00010032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010032
(570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas... 75 1e-16
gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis th... 64 3e-13
dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis tha... 64 3e-13
ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis tha... 64 3e-13
ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g... 65 3e-13
>ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
vinifera]
Length = 888
Score = 74.7 bits (182), Expect(3) = 1e-16
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = -3
Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
EL IDSVCV A+SPPVK +P PYLGFL +I MF+ VKPKP+S +AM
Sbjct: 189 ELKIDSVCVNAYSPPVKGPELPVPYLGFLSRIPAYMFSFVKPKPVSKRAMEIKREREELK 248
Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
E+EMMEKAI++Q
Sbjct: 249 RNRKKELVGMREEREMMEKAIRVQ 272
Score = 28.9 bits (63), Expect(3) = 1e-16
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 371 AEVVLAVLDDSRVLRIVIRS 312
AE VL VL+DSRVLR V+ S
Sbjct: 157 AEAVLVVLEDSRVLRTVVPS 176
Score = 27.3 bits (59), Expect(3) = 1e-16
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -1
Query: 414 KKEGKLKHIIKP 379
K+EGKLKH+IKP
Sbjct: 134 KREGKLKHVIKP 145
>gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis thaliana]
Length = 983
Score = 64.3 bits (155), Expect(3) = 3e-13
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = -3
Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A
Sbjct: 339 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 398
Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
+ E+ MMEK +K Q
Sbjct: 399 RQRKEEIETMKEERVMMEKTMKAQ 422
Score = 29.3 bits (64), Expect(3) = 3e-13
Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
LSLR AE VL VL+DSRVLR V+ S
Sbjct: 301 LSLRQKAEPVLVVLEDSRVLRTVLPS 326
Score = 26.2 bits (56), Expect(3) = 3e-13
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 414 KKEGKLKHIIKP 379
K EGKLKH+IKP
Sbjct: 287 KAEGKLKHVIKP 298
>dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis thaliana]
Length = 976
Score = 64.3 bits (155), Expect(3) = 3e-13
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = -3
Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A
Sbjct: 277 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 336
Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
+ E+ MMEK +K Q
Sbjct: 337 RQRKEEIETMKEERVMMEKTMKAQ 360
Score = 29.3 bits (64), Expect(3) = 3e-13
Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
LSLR AE VL VL+DSRVLR V+ S
Sbjct: 239 LSLRQKAEPVLVVLEDSRVLRTVLPS 264
Score = 26.2 bits (56), Expect(3) = 3e-13
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 414 KKEGKLKHIIKP 379
K EGKLKH+IKP
Sbjct: 225 KAEGKLKHVIKP 236
>ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|332642273|gb|AEE75794.1| AAA-type ATPase family
protein [Arabidopsis thaliana]
Length = 876
Score = 64.3 bits (155), Expect(3) = 3e-13
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = -3
Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A
Sbjct: 177 ELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFK 236
Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
+ E+ MMEK +K Q
Sbjct: 237 RQRKEEIETMKEERVMMEKTMKAQ 260
Score = 29.3 bits (64), Expect(3) = 3e-13
Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
LSLR AE VL VL+DSRVLR V+ S
Sbjct: 139 LSLRQKAEPVLVVLEDSRVLRTVLPS 164
Score = 26.2 bits (56), Expect(3) = 3e-13
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 414 KKEGKLKHIIKP 379
K EGKLKH+IKP
Sbjct: 125 KAEGKLKHVIKP 136
>ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata]
gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata
subsp. lyrata]
Length = 874
Score = 65.5 bits (158), Expect(3) = 3e-13
Identities = 37/84 (44%), Positives = 46/84 (54%)
Frame = -3
Query: 307 ELGIDSVCVIAFSPPVKKLVIPSPYLGFLLKISEKMFTAVKPKPLSNKAMXXXXXXXXXX 128
ELGID CV A++PPVK+ +PSPYLGFL K+ M T VKPK S +A
Sbjct: 175 ELGIDGQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKKMREDFK 234
Query: 127 XXXXXXXXRTELEKEMMEKAIKMQ 56
R + E+ MMEK +K Q
Sbjct: 235 RQRKEEIERMKEERAMMEKTMKAQ 258
Score = 29.3 bits (64), Expect(3) = 3e-13
Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 386 LSLRT-AEVVLAVLDDSRVLRIVIRS 312
LSLR AE VL VL+DSRVLR V+ S
Sbjct: 137 LSLRQKAEPVLVVLEDSRVLRTVLPS 162
Score = 25.0 bits (53), Expect(3) = 3e-13
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 414 KKEGKLKHIIKP 379
K +GKLKH+IKP
Sbjct: 123 KAQGKLKHVIKP 134